RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 OR8D1Q8WZ84 308 aa18.52■□□□□ 0.56
PDLIM2-215ENST00000456545 ZNF419Q96HQ0 510 aaPredicted RBP18.52■□□□□ 0.56
PDLIM2-215ENST00000456545 CATSPERBQ9H7T0 1116 aa18.52■□□□□ 0.56
PDLIM2-215ENST00000456545 FBXL12Q9NXK8 326 aa18.52■□□□□ 0.56
PDLIM2-215ENST00000456545 PCSK1NQ9UHG2 260 aa18.52■□□□□ 0.56
PDLIM2-215ENST00000456545 VPS51Q9UID3 782 aa18.52■□□□□ 0.56
PDLIM2-215ENST00000456545 NUP205Q92621 2012 aa18.52■□□□□ 0.55
PDLIM2-215ENST00000456545 ATXN2Q99700 1313 aaKnown RBP18.51■□□□□ 0.55
PDLIM2-215ENST00000456545 GPR179Q6PRD1 2367 aa18.51■□□□□ 0.55
PDLIM2-215ENST00000456545 A0A087X0T9 212 aa18.51■□□□□ 0.55
PDLIM2-215ENST00000456545 DAPK3O43293 454 aa18.51■□□□□ 0.55
PDLIM2-215ENST00000456545 ATP9BO43861 1147 aa18.51■□□□□ 0.55
PDLIM2-215ENST00000456545 FAM228BP0C875 321 aa18.51■□□□□ 0.55
PDLIM2-215ENST00000456545 GNSP15586 552 aa18.51■□□□□ 0.55
PDLIM2-215ENST00000456545 RECQLP46063 649 aaPredicted RBP18.51■□□□□ 0.55
PDLIM2-215ENST00000456545 PSMD8P48556 350 aa18.51■□□□□ 0.55
PDLIM2-215ENST00000456545 VASPP50552 380 aaPredicted RBP18.51■□□□□ 0.55
PDLIM2-215ENST00000456545 SLC20A2Q08357 652 aa18.51■□□□□ 0.55
PDLIM2-215ENST00000456545 ELAVL3Q14576 367 aaKnown RBP18.51■□□□□ 0.55
PDLIM2-215ENST00000456545 DUOXA1Q1HG43 343 aa18.51■□□□□ 0.55
PDLIM2-215ENST00000456545 TRIM61Q5EBN2 209 aa18.51■□□□□ 0.55
PDLIM2-215ENST00000456545 TCEAL6Q6IPX3 200 aa18.51■□□□□ 0.55
PDLIM2-215ENST00000456545 RABEPKQ7Z6M1 372 aa18.51■□□□□ 0.55
PDLIM2-215ENST00000456545 SLC41A1Q8IVJ1 513 aa18.51■□□□□ 0.55
PDLIM2-215ENST00000456545 CADM4Q8NFZ8 388 aa18.51■□□□□ 0.55
PDLIM2-215ENST00000456545 CEP76Q8TAP6 659 aa18.51■□□□□ 0.55
PDLIM2-215ENST00000456545 NETO1Q8TDF5 533 aa18.51■□□□□ 0.55
PDLIM2-215ENST00000456545 FNIP1Q8TF40 1166 aa18.51■□□□□ 0.55
PDLIM2-215ENST00000456545 TCEAL3Q969E4 200 aa18.51■□□□□ 0.55
PDLIM2-215ENST00000456545 PSMB7Q99436 277 aa18.51■□□□□ 0.55
PDLIM2-215ENST00000456545 MIR1-1HGQ9H1L0 117 aa18.51■□□□□ 0.55
PDLIM2-215ENST00000456545 PABPC3Q9H361 631 aaKnown RBP18.51■□□□□ 0.55
PDLIM2-215ENST00000456545 DHX35Q9H5Z1 703 aaKnown RBP18.51■□□□□ 0.55
PDLIM2-215ENST00000456545 TMEM248Q9NWD8 314 aa18.51■□□□□ 0.55
PDLIM2-215ENST00000456545 DONSONQ9NYP3 566 aa18.51■□□□□ 0.55
PDLIM2-215ENST00000456545 ARHGAP20Q9P2F6 1191 aa18.51■□□□□ 0.55
PDLIM2-215ENST00000456545 PILRBQ9UKJ0 227 aa18.51■□□□□ 0.55
PDLIM2-215ENST00000456545 MUC22E2RYF6 1773 aaPredicted RBP18.5■□□□□ 0.55
PDLIM2-215ENST00000456545 DOCK4Q8N1I0 1966 aa18.5■□□□□ 0.55
PDLIM2-215ENST00000456545 FAM47DPA6NHR8 397 aa18.5■□□□□ 0.55
PDLIM2-215ENST00000456545 PATE3B3GLJ2 98 aa18.5■□□□□ 0.55
PDLIM2-215ENST00000456545 MID1O15344 667 aa18.5■□□□□ 0.55
PDLIM2-215ENST00000456545 AKR1B10O60218 316 aa18.5■□□□□ 0.55
PDLIM2-215ENST00000456545 GDF9O60383 454 aa18.5■□□□□ 0.55
PDLIM2-215ENST00000456545 RAMP2O60895 175 aa18.5■□□□□ 0.55
PDLIM2-215ENST00000456545 RNASEH2AO75792 299 aaKnown RBP18.5■□□□□ 0.55
PDLIM2-215ENST00000456545 ADH1BP00325 375 aa18.5■□□□□ 0.55
PDLIM2-215ENST00000456545 IGLV3-19P01714 112 aa18.5■□□□□ 0.55
PDLIM2-215ENST00000456545 SRCP12931 536 aa18.5■□□□□ 0.55
PDLIM2-215ENST00000456545 VAV1P15498 845 aa18.5■□□□□ 0.55
PDLIM2-215ENST00000456545 DNA2P51530 1060 aa18.5■□□□□ 0.55
PDLIM2-215ENST00000456545 TPI1P60174 286 aa18.5■□□□□ 0.55
PDLIM2-215ENST00000456545 PUM1Q14671 1186 aaKnown RBP eCLIP18.5■□□□□ 0.55
PDLIM2-215ENST00000456545 POLD3Q15054 466 aaPredicted RBP18.5■□□□□ 0.55
PDLIM2-215ENST00000456545 ERMARDQ5T6L9 678 aa18.5■□□□□ 0.55
PDLIM2-215ENST00000456545 MANEALQ5VSG8 457 aa18.5■□□□□ 0.55
PDLIM2-215ENST00000456545 FAM46CQ5VWP2 391 aa18.5■□□□□ 0.55
PDLIM2-215ENST00000456545 LINGO4Q6UY18 593 aa18.5■□□□□ 0.55
PDLIM2-215ENST00000456545 USP30Q70CQ3 517 aa18.5■□□□□ 0.55
PDLIM2-215ENST00000456545 HDDC3Q8N4P3 179 aa18.5■□□□□ 0.55
PDLIM2-215ENST00000456545 SNX19Q92543 992 aa18.5■□□□□ 0.55
PDLIM2-215ENST00000456545 RMDN1Q96DB5 314 aa18.5■□□□□ 0.55
PDLIM2-215ENST00000456545 FAM129BQ96TA1 746 aa18.5■□□□□ 0.55
PDLIM2-215ENST00000456545 THAP2Q9H0W7 228 aa18.5■□□□□ 0.55
PDLIM2-215ENST00000456545 MAGEH1Q9H213 219 aa18.5■□□□□ 0.55
PDLIM2-215ENST00000456545 SGK2Q9HBY8 427 aa18.5■□□□□ 0.55
PDLIM2-215ENST00000456545 TMEM74BQ9NUR3 256 aa18.5■□□□□ 0.55
PDLIM2-215ENST00000456545 SUSD2Q9UGT4 822 aa18.5■□□□□ 0.55
PDLIM2-215ENST00000456545 AP4E1Q9UPM8 1137 aa18.5■□□□□ 0.55
PDLIM2-215ENST00000456545 HS3ST2Q9Y278 367 aa18.5■□□□□ 0.55
PDLIM2-215ENST00000456545 A0A1W2PP55 124 aa18.49■□□□□ 0.55
PDLIM2-215ENST00000456545 METTL12A8MUP2 240 aa18.49■□□□□ 0.55
PDLIM2-215ENST00000456545 C1QTNF3-AMACRE9PGA6 284 aa18.49■□□□□ 0.55
PDLIM2-215ENST00000456545 SEMA4FO95754 770 aa18.49■□□□□ 0.55
PDLIM2-215ENST00000456545 MT-CO1P00395 513 aa18.49■□□□□ 0.55
PDLIM2-215ENST00000456545 C5AR1P21730 350 aa18.49■□□□□ 0.55
PDLIM2-215ENST00000456545 MAOBP27338 520 aa18.49■□□□□ 0.55
PDLIM2-215ENST00000456545 HNRNPH3P31942 346 aaKnown RBP18.49■□□□□ 0.55
PDLIM2-215ENST00000456545 ACSL1P33121 698 aa18.49■□□□□ 0.55
PDLIM2-215ENST00000456545 HOXD12P35452 270 aa18.49■□□□□ 0.55
PDLIM2-215ENST00000456545 CLCN6P51797 869 aa18.49■□□□□ 0.55
PDLIM2-215ENST00000456545 ATXN3P54252 364 aaPredicted RBP18.49■□□□□ 0.55
PDLIM2-215ENST00000456545 ADKP55263 362 aaKnown RBP18.49■□□□□ 0.55
PDLIM2-215ENST00000456545 IRX4P78413 519 aa18.49■□□□□ 0.55
PDLIM2-215ENST00000456545 ACAP1Q15027 740 aa18.49■□□□□ 0.55
PDLIM2-215ENST00000456545 DCAF12L1Q5VU92 463 aa18.49■□□□□ 0.55
PDLIM2-215ENST00000456545 Q6ZVU0 165 aa18.49■□□□□ 0.55
PDLIM2-215ENST00000456545 FRS2Q8WU20 508 aa18.49■□□□□ 0.55
PDLIM2-215ENST00000456545 EDEM2Q9BV94 578 aa18.49■□□□□ 0.55
PDLIM2-215ENST00000456545 NUP85Q9BW27 656 aa18.49■□□□□ 0.55
PDLIM2-215ENST00000456545 TRIM7Q9C029 511 aa18.49■□□□□ 0.55
PDLIM2-215ENST00000456545 GPATCH2LQ9NWQ4 482 aa18.49■□□□□ 0.55
PDLIM2-215ENST00000456545 IP6K2Q9UHH9 426 aa18.49■□□□□ 0.55
PDLIM2-215ENST00000456545 SLC6A14Q9UN76 642 aa18.49■□□□□ 0.55
PDLIM2-215ENST00000456545 EIF3CLB5ME19 914 aaKnown RBP18.48■□□□□ 0.55
PDLIM2-215ENST00000456545 AKR1B15C9JRZ8 316 aaPredicted RBP18.48■□□□□ 0.55
PDLIM2-215ENST00000456545 K7ERQ8 282 aa18.48■□□□□ 0.55
PDLIM2-215ENST00000456545 EEF2KO00418 725 aaKnown RBP18.48■□□□□ 0.55
PDLIM2-215ENST00000456545 GLDCP23378 1020 aa18.48■□□□□ 0.55
PDLIM2-215ENST00000456545 MIPP30301 263 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms