RNA–Protein interactions for RNA: ENST00000453040.5

CHL1-208, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 2

Gene CHL1, Length 3,960 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-208ENST00000453040 DNASE1L3Q13609 305 aa11.15□□□□□ -0.62
CHL1-208ENST00000453040 TDRD10Q5VZ19 366 aaKnown RBP11.15□□□□□ -0.62
CHL1-208ENST00000453040 RNF19BQ6ZMZ0 732 aa11.15□□□□□ -0.62
CHL1-208ENST00000453040 TMEM26Q6ZUK4 368 aa11.15□□□□□ -0.62
CHL1-208ENST00000453040 RTP4Q96DX8 246 aa11.15□□□□□ -0.62
CHL1-208ENST00000453040 ACCSQ96QU6 501 aa11.15□□□□□ -0.62
CHL1-208ENST00000453040 CDK5RAP1Q96SZ6 601 aaKnown RBP11.15□□□□□ -0.62
CHL1-208ENST00000453040 GPRC5CQ9NQ84 441 aa11.15□□□□□ -0.62
CHL1-208ENST00000453040 TP53BP1Q12888 1972 aaPredicted RBP11.15□□□□□ -0.63
CHL1-208ENST00000453040 GOLGA8IPA6NC78 632 aa11.15□□□□□ -0.63
CHL1-208ENST00000453040 GOLGA8JA6NMD2 632 aa11.15□□□□□ -0.63
CHL1-208ENST00000453040 NUAK1O60285 661 aa11.15□□□□□ -0.63
CHL1-208ENST00000453040 KLHL41O60662 606 aa11.15□□□□□ -0.63
CHL1-208ENST00000453040 RPS6KA4O75676 772 aa11.15□□□□□ -0.63
CHL1-208ENST00000453040 IFNA8P32881 189 aa11.15□□□□□ -0.63
CHL1-208ENST00000453040 POU6F1Q14863 301 aa11.15□□□□□ -0.63
CHL1-208ENST00000453040 RGS21Q2M5E4 152 aa11.15□□□□□ -0.63
CHL1-208ENST00000453040 DNAL1Q4LDG9 190 aa11.15□□□□□ -0.63
CHL1-208ENST00000453040 TFDP3Q5H9I0 405 aa11.15□□□□□ -0.63
CHL1-208ENST00000453040 HMBOX1Q6NT76 420 aa11.15□□□□□ -0.63
CHL1-208ENST00000453040 HAUS6Q7Z4H7 955 aa11.15□□□□□ -0.63
CHL1-208ENST00000453040 PDZD8Q8NEN9 1154 aa11.15□□□□□ -0.63
CHL1-208ENST00000453040 OR4M1Q8NGD0 313 aa11.15□□□□□ -0.63
CHL1-208ENST00000453040 ATP13A3Q9H7F0 1226 aa11.15□□□□□ -0.63
CHL1-208ENST00000453040 PCDH12Q9NPG4 1184 aa11.15□□□□□ -0.63
CHL1-208ENST00000453040 EPS15L1Q9UBC2 864 aa11.15□□□□□ -0.63
CHL1-208ENST00000453040 SOX13Q9UN79 622 aa11.15□□□□□ -0.63
CHL1-208ENST00000453040 MAGED2Q9UNF1 606 aaPredicted RBP11.15□□□□□ -0.63
CHL1-208ENST00000453040 CFL1P23528 166 aaKnown RBP11.14□□□□□ -0.63
CHL1-208ENST00000453040 TSPY1Q01534 308 aa11.14□□□□□ -0.63
CHL1-208ENST00000453040 TBCCQ15814 346 aa11.14□□□□□ -0.63
CHL1-208ENST00000453040 PGS1Q32NB8 556 aa11.14□□□□□ -0.63
CHL1-208ENST00000453040 ZACNQ401N2 412 aa11.14□□□□□ -0.63
CHL1-208ENST00000453040 TMEM126BQ8IUX1 230 aa11.14□□□□□ -0.63
CHL1-208ENST00000453040 OR4M2Q8NGB6 313 aa11.14□□□□□ -0.63
CHL1-208ENST00000453040 FEZF2Q8TBJ5 459 aa11.14□□□□□ -0.63
CHL1-208ENST00000453040 C1QTNF7Q9BXJ2 289 aa11.14□□□□□ -0.63
CHL1-208ENST00000453040 ITGA11Q9UKX5 1188 aa11.14□□□□□ -0.63
CHL1-208ENST00000453040 TBX20Q9UMR3 447 aa11.14□□□□□ -0.63
CHL1-208ENST00000453040 SORCS3Q9UPU3 1222 aa11.14□□□□□ -0.63
CHL1-208ENST00000453040 GOLGA8SH3BPF8 625 aa11.14□□□□□ -0.63
CHL1-208ENST00000453040 GOLGA8MH3BSY2 632 aa11.14□□□□□ -0.63
CHL1-208ENST00000453040 EIF2S1P05198 315 aaKnown RBP11.14□□□□□ -0.63
CHL1-208ENST00000453040 EDN1P05305 212 aa11.14□□□□□ -0.63
CHL1-208ENST00000453040 CCDC130P13994 396 aa11.14□□□□□ -0.63
CHL1-208ENST00000453040 HADHAP40939 763 aa11.14□□□□□ -0.63
CHL1-208ENST00000453040 KLHL38Q2WGJ6 581 aa11.14□□□□□ -0.63
CHL1-208ENST00000453040 CEP55Q53EZ4 464 aa11.14□□□□□ -0.63
CHL1-208ENST00000453040 TCHHL1Q5QJ38 904 aaPredicted RBP11.14□□□□□ -0.63
CHL1-208ENST00000453040 SLC16A12Q6ZSM3 486 aa11.14□□□□□ -0.63
CHL1-208ENST00000453040 UBE2Q1Q7Z7E8 422 aa11.14□□□□□ -0.63
CHL1-208ENST00000453040 FBXO11Q86XK2 927 aa11.14□□□□□ -0.63
CHL1-208ENST00000453040 SH3YL1Q96HL8 342 aaPredicted RBP11.14□□□□□ -0.63
CHL1-208ENST00000453040 MMP19Q99542 508 aa11.14□□□□□ -0.63
CHL1-208ENST00000453040 VPS37BQ9H9H4 285 aa11.14□□□□□ -0.63
CHL1-208ENST00000453040 PLSCR3Q9NRY6 295 aa11.14□□□□□ -0.63
CHL1-208ENST00000453040 COL11A1P12107 1806 aaPredicted RBP11.14□□□□□ -0.63
CHL1-208ENST00000453040 TNPO2O14787 897 aaKnown RBP11.14□□□□□ -0.63
CHL1-208ENST00000453040 BPGMP07738 259 aa11.14□□□□□ -0.63
CHL1-208ENST00000453040 RFC1P35251 1148 aaPredicted RBP11.14□□□□□ -0.63
CHL1-208ENST00000453040 GRSF1Q12849 480 aaKnown RBP eCLIP11.14□□□□□ -0.63
CHL1-208ENST00000453040 IFRD2Q12894 506 aaPredicted RBP11.14□□□□□ -0.63
CHL1-208ENST00000453040 SEPT6Q14141 434 aa11.14□□□□□ -0.63
CHL1-208ENST00000453040 RAB39AQ14964 217 aa11.14□□□□□ -0.63
CHL1-208ENST00000453040 TIFABQ6ZNK6 161 aa11.14□□□□□ -0.63
CHL1-208ENST00000453040 FRMD7Q6ZUT3 714 aa11.14□□□□□ -0.63
CHL1-208ENST00000453040 KCTD20Q7Z5Y7 419 aa11.14□□□□□ -0.63
CHL1-208ENST00000453040 C2orf69Q8N8R5 385 aa11.14□□□□□ -0.63
CHL1-208ENST00000453040 ICA1LQ8NDH6 482 aa11.14□□□□□ -0.63
CHL1-208ENST00000453040 VPS35Q96QK1 796 aa11.14□□□□□ -0.63
CHL1-208ENST00000453040 C17orf80Q9BSJ5 609 aa11.14□□□□□ -0.63
CHL1-208ENST00000453040 ARMC1Q9NVT9 282 aa11.14□□□□□ -0.63
CHL1-208ENST00000453040 STK39Q9UEW8 545 aa11.14□□□□□ -0.63
CHL1-208ENST00000453040 CYTH4Q9UIA0 394 aa11.14□□□□□ -0.63
CHL1-208ENST00000453040 PRR12Q9ULL5 1215 aa11.14□□□□□ -0.63
CHL1-208ENST00000453040 SQORQ9Y6N5 450 aa11.14□□□□□ -0.63
CHL1-208ENST00000453040 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.13□□□□□ -0.63
CHL1-208ENST00000453040 SLC9A3R1O14745 358 aaPredicted RBP11.13□□□□□ -0.63
CHL1-208ENST00000453040 SNPHO15079 494 aa11.13□□□□□ -0.63
CHL1-208ENST00000453040 POLR1CO15160 346 aaPredicted RBP11.13□□□□□ -0.63
CHL1-208ENST00000453040 ZBTB14O43829 449 aa11.13□□□□□ -0.63
CHL1-208ENST00000453040 RNASEH2AO75792 299 aaKnown RBP11.13□□□□□ -0.63
CHL1-208ENST00000453040 S100BP04271 92 aaPredicted RBP11.13□□□□□ -0.63
CHL1-208ENST00000453040 MSL3P1P0C860 447 aa11.13□□□□□ -0.63
CHL1-208ENST00000453040 AQP5P55064 265 aa11.13□□□□□ -0.63
CHL1-208ENST00000453040 CETN1Q12798 172 aa11.13□□□□□ -0.63
CHL1-208ENST00000453040 ITGADQ13349 1161 aa11.13□□□□□ -0.63
CHL1-208ENST00000453040 MGAT5BQ3V5L5 792 aa11.13□□□□□ -0.63
CHL1-208ENST00000453040 GJC2Q5T442 439 aaPredicted RBP11.13□□□□□ -0.63
CHL1-208ENST00000453040 XAF1Q6GPH4 301 aa11.13□□□□□ -0.63
CHL1-208ENST00000453040 TTC9Q92623 222 aa11.13□□□□□ -0.63
CHL1-208ENST00000453040 SH3KBP1Q96B97 665 aa11.13□□□□□ -0.63
CHL1-208ENST00000453040 VPS45Q9NRW7 570 aa11.13□□□□□ -0.63
CHL1-208ENST00000453040 PSMD13Q9UNM6 376 aa11.13□□□□□ -0.63
CHL1-208ENST00000453040 A0A0G2JMZ2 1700 aa11.13□□□□□ -0.63
CHL1-208ENST00000453040 LRRC37A2A6NM11 1700 aa11.13□□□□□ -0.63
CHL1-208ENST00000453040 LINC00854A0A1B0GVQ3 168 aa11.13□□□□□ -0.63
CHL1-208ENST00000453040 ATP2A1O14983 1001 aa11.13□□□□□ -0.63
CHL1-208ENST00000453040 SSTR3P32745 418 aaPredicted RBP11.13□□□□□ -0.63
CHL1-208ENST00000453040 ELK3P41970 407 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms