RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 ARHGAP20Q9P2F6 1191 aa11.2□□□□□ -0.62
USP1-204ENST00000452143 APEX2Q9UBZ4 518 aa11.2□□□□□ -0.62
USP1-204ENST00000452143 HS3ST2Q9Y278 367 aa11.2□□□□□ -0.62
USP1-204ENST00000452143 ASXL3Q9C0F0 2248 aa11.2□□□□□ -0.62
USP1-204ENST00000452143 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.19□□□□□ -0.62
USP1-204ENST00000452143 GTPBP10A4D1E9 387 aaKnown RBP11.19□□□□□ -0.62
USP1-204ENST00000452143 PRAMEF26H0Y7S4 382 aa11.19□□□□□ -0.62
USP1-204ENST00000452143 CBX4O00257 560 aa11.19□□□□□ -0.62
USP1-204ENST00000452143 MCF2LO15068 1137 aa11.19□□□□□ -0.62
USP1-204ENST00000452143 RNGTTO60942 597 aaKnown RBP11.19□□□□□ -0.62
USP1-204ENST00000452143 RTN2O75298 545 aa11.19□□□□□ -0.62
USP1-204ENST00000452143 CLDN11O75508 207 aa11.19□□□□□ -0.62
USP1-204ENST00000452143 JUPP14923 745 aa11.19□□□□□ -0.62
USP1-204ENST00000452143 CKMT2P17540 419 aa11.19□□□□□ -0.62
USP1-204ENST00000452143 SNX16P57768 344 aa11.19□□□□□ -0.62
USP1-204ENST00000452143 CENPCQ03188 943 aa11.19□□□□□ -0.62
USP1-204ENST00000452143 ZNF177Q13360 481 aaPredicted RBP11.19□□□□□ -0.62
USP1-204ENST00000452143 BECN1Q14457 450 aa11.19□□□□□ -0.62
USP1-204ENST00000452143 STAT4Q14765 748 aa11.19□□□□□ -0.62
USP1-204ENST00000452143 TAF5Q15542 800 aa11.19□□□□□ -0.62
USP1-204ENST00000452143 C5orf22Q49AR2 442 aa11.19□□□□□ -0.62
USP1-204ENST00000452143 HES3Q5TGS1 186 aa11.19□□□□□ -0.62
USP1-204ENST00000452143 FBXL19Q6PCT2 694 aa11.19□□□□□ -0.62
USP1-204ENST00000452143 OLFML1Q6UWY5 402 aa11.19□□□□□ -0.62
USP1-204ENST00000452143 SLC26A9Q7LBE3 791 aa11.19□□□□□ -0.62
USP1-204ENST00000452143 KANSL1Q7Z3B3 1105 aa11.19□□□□□ -0.62
USP1-204ENST00000452143 SPATS2Q86XZ4 545 aaKnown RBP11.19□□□□□ -0.62
USP1-204ENST00000452143 DEFB106AQ8N104 65 aa11.19□□□□□ -0.62
USP1-204ENST00000452143 CACTIN-AS1Q8N1I8 211 aa11.19□□□□□ -0.62
USP1-204ENST00000452143 SH2D3CQ8N5H7 860 aa11.19□□□□□ -0.62
USP1-204ENST00000452143 RFFLQ8WZ73 363 aa11.19□□□□□ -0.62
USP1-204ENST00000452143 SHC3Q92529 594 aa11.19□□□□□ -0.62
USP1-204ENST00000452143 RNF34Q969K3 372 aa11.19□□□□□ -0.62
USP1-204ENST00000452143 ALG14Q96F25 216 aa11.19□□□□□ -0.62
USP1-204ENST00000452143 PPP1R13BQ96KQ4 1090 aa11.19□□□□□ -0.62
USP1-204ENST00000452143 CCDC114Q96M63 670 aa11.19□□□□□ -0.62
USP1-204ENST00000452143 CPXM1Q96SM3 734 aa11.19□□□□□ -0.62
USP1-204ENST00000452143 FEM1AQ9BSK4 669 aa11.19□□□□□ -0.62
USP1-204ENST00000452143 SRRTQ9BXP5 876 aaKnown RBP11.19□□□□□ -0.62
USP1-204ENST00000452143 ACP6Q9NPH0 428 aa11.19□□□□□ -0.62
USP1-204ENST00000452143 TMEM51Q9NW97 253 aa11.19□□□□□ -0.62
USP1-204ENST00000452143 VPS28Q9UK41 221 aa11.19□□□□□ -0.62
USP1-204ENST00000452143 PPM1HQ9ULR3 514 aa11.19□□□□□ -0.62
USP1-204ENST00000452143 PCDHGC3Q9UN70 934 aa11.19□□□□□ -0.62
USP1-204ENST00000452143 TBC1D30Q9Y2I9 924 aa11.19□□□□□ -0.62
USP1-204ENST00000452143 FLNBO75369 2602 aaKnown RBP11.18□□□□□ -0.62
USP1-204ENST00000452143 SYNJ2BP-COX16A0A087WUM0 186 aa11.18□□□□□ -0.62
USP1-204ENST00000452143 BECN2A8MW95 431 aa11.18□□□□□ -0.62
USP1-204ENST00000452143 DAB1O75553 588 aa11.18□□□□□ -0.62
USP1-204ENST00000452143 ACP1P24666 158 aa11.18□□□□□ -0.62
USP1-204ENST00000452143 MAT2AP31153 395 aaKnown RBP11.18□□□□□ -0.62
USP1-204ENST00000452143 METAP1P53582 386 aa11.18□□□□□ -0.62
USP1-204ENST00000452143 CDH4P55283 916 aa11.18□□□□□ -0.62
USP1-204ENST00000452143 STX17P56962 302 aa11.18□□□□□ -0.62
USP1-204ENST00000452143 CCDC15Q0P6D6 951 aa11.18□□□□□ -0.62
USP1-204ENST00000452143 CNTN1Q12860 1018 aa11.18□□□□□ -0.62
USP1-204ENST00000452143 AUHQ13825 339 aaKnown RBP11.18□□□□□ -0.62
USP1-204ENST00000452143 RTP5Q14D33 572 aa11.18□□□□□ -0.62
USP1-204ENST00000452143 DLG2Q15700 870 aa11.18□□□□□ -0.62
USP1-204ENST00000452143 ACCSLQ4AC99 568 aa11.18□□□□□ -0.62
USP1-204ENST00000452143 ACBD5Q5T8D3 534 aaPredicted RBP11.18□□□□□ -0.62
USP1-204ENST00000452143 NEK5Q6P3R8 708 aa11.18□□□□□ -0.62
USP1-204ENST00000452143 GBP6Q6ZN66 633 aa11.18□□□□□ -0.62
USP1-204ENST00000452143 C11orf57Q6ZUT1 292 aaPredicted RBP11.18□□□□□ -0.62
USP1-204ENST00000452143 FAM183BPQ6ZVS7 135 aa11.18□□□□□ -0.62
USP1-204ENST00000452143 Q6ZVU0 165 aa11.18□□□□□ -0.62
USP1-204ENST00000452143 ZDHHC17Q8IUH5 632 aa11.18□□□□□ -0.62
USP1-204ENST00000452143 TMEM145Q8NBT3 493 aa11.18□□□□□ -0.62
USP1-204ENST00000452143 ZNF397Q8NF99 534 aaPredicted RBP11.18□□□□□ -0.62
USP1-204ENST00000452143 PIP4K2CQ8TBX8 421 aa11.18□□□□□ -0.62
USP1-204ENST00000452143 UBL7Q96S82 380 aaPredicted RBP11.18□□□□□ -0.62
USP1-204ENST00000452143 C2orf49Q9BVC5 232 aaPredicted RBP11.18□□□□□ -0.62
USP1-204ENST00000452143 RRN3Q9NYV6 651 aa11.18□□□□□ -0.62
USP1-204ENST00000452143 COX16Q9P0S2 106 aa11.18□□□□□ -0.62
USP1-204ENST00000452143 SARDHQ9UL12 918 aa11.18□□□□□ -0.62
USP1-204ENST00000452143 VANGL2Q9ULK5 521 aa11.18□□□□□ -0.62
USP1-204ENST00000452143 PAXBP1Q9Y5B6 917 aa11.18□□□□□ -0.62
USP1-204ENST00000452143 OR51B4Q9Y5P0 310 aa11.18□□□□□ -0.62
USP1-204ENST00000452143 HS3ST4Q9Y661 456 aa11.18□□□□□ -0.62
USP1-204ENST00000452143 EIF4E1BA6NMX2 242 aaKnown RBP11.17□□□□□ -0.62
USP1-204ENST00000452143 BIN1O00499 593 aa11.17□□□□□ -0.62
USP1-204ENST00000452143 PAGE1O75459 146 aa11.17□□□□□ -0.62
USP1-204ENST00000452143 ZNF18P17022 549 aa11.17□□□□□ -0.62
USP1-204ENST00000452143 NOS2P35228 1153 aa11.17□□□□□ -0.62
USP1-204ENST00000452143 USP8P40818 1118 aa11.17□□□□□ -0.62
USP1-204ENST00000452143 EIF2S3P41091 472 aaKnown RBP11.17□□□□□ -0.62
USP1-204ENST00000452143 TAS2R38P59533 333 aa11.17□□□□□ -0.62
USP1-204ENST00000452143 KRT83P78385 493 aa11.17□□□□□ -0.62
USP1-204ENST00000452143 BNIP3Q12983 259 aa11.17□□□□□ -0.62
USP1-204ENST00000452143 TARDBPQ13148 414 aaKnown RBP eCLIP11.17□□□□□ -0.62
USP1-204ENST00000452143 NME3Q13232 169 aa11.17□□□□□ -0.62
USP1-204ENST00000452143 ARHGAP44Q17R89 818 aa11.17□□□□□ -0.62
USP1-204ENST00000452143 EXOC3L4Q17RC7 722 aa11.17□□□□□ -0.62
USP1-204ENST00000452143 PROX2Q3B8N5 592 aa11.17□□□□□ -0.62
USP1-204ENST00000452143 HS1BP3Q53T59 392 aa11.17□□□□□ -0.62
USP1-204ENST00000452143 BRMS1LQ5PSV4 323 aa11.17□□□□□ -0.62
USP1-204ENST00000452143 PIP5KL1Q5T9C9 394 aa11.17□□□□□ -0.62
USP1-204ENST00000452143 GJB7Q6PEY0 223 aa11.17□□□□□ -0.62
USP1-204ENST00000452143 LRRC69Q6ZNQ3 347 aa11.17□□□□□ -0.62
USP1-204ENST00000452143 PASD1Q8IV76 773 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms