RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 BRAFP15056 766 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 KRT4P19013 534 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 RGRP47804 291 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 PAPOLAP51003 745 aaKnown RBP6.73□□□□□ -1.33
USP46-202ENST00000451218 BFSP2Q13515 415 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 TMED2Q15363 201 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 KLHDC10Q6PID8 442 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 ASRGL1Q7L266 308 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 SPATA2LQ8IUW3 424 aaPredicted RBP6.73□□□□□ -1.33
USP46-202ENST00000451218 LRRC43Q8N309 656 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 PNPLA1Q8N8W4 532 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 AZIN2Q96A70 460 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 IMP4Q96G21 291 aaKnown RBP6.73□□□□□ -1.33
USP46-202ENST00000451218 MAGEB18Q96M61 343 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 FCRL5Q96RD9 977 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 ZBP1Q9H171 429 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 COMMD8Q9NX08 183 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 PCDHB7Q9Y5E2 793 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 ZMPSTE24O75844 475 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 CD1EP15812 388 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 CA5AP35218 305 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 GRIK1P39086 918 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 CHRNA4P43681 627 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 ATN1P54259 1190 aaPredicted RBP6.73□□□□□ -1.33
USP46-202ENST00000451218 CDK16Q00536 496 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 ACVR1Q04771 509 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 CTXN3Q4LDR2 81 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 TSTD2Q5T7W7 516 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 C4orf50Q6ZRC1 276 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 CHSY1Q86X52 802 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 GSDMBQ8TAX9 411 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 TTC17Q96AE7 1141 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 ZBED2Q9BTP6 218 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 TTPALQ9BTX7 342 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 TRABDQ9H4I3 376 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 PPANQ9NQ55 473 aaKnown RBP6.73□□□□□ -1.33
USP46-202ENST00000451218 ABCF3Q9NUQ8 709 aa6.73□□□□□ -1.33
USP46-202ENST00000451218 LOC285095A0A1B0GVY8 99 aa6.72□□□□□ -1.33
USP46-202ENST00000451218 TLDC2A0PJX2 215 aa6.72□□□□□ -1.33
USP46-202ENST00000451218 TBKBP1A7MCY6 615 aa6.72□□□□□ -1.33
USP46-202ENST00000451218 AURKAO14965 403 aa6.72□□□□□ -1.33
USP46-202ENST00000451218 CPP00450 1065 aa6.72□□□□□ -1.33
USP46-202ENST00000451218 TIMP1P01033 207 aa6.72□□□□□ -1.33
USP46-202ENST00000451218 PRLP01236 227 aa6.72□□□□□ -1.33
USP46-202ENST00000451218 SOD2P04179 222 aa6.72□□□□□ -1.33
USP46-202ENST00000451218 GSTA2P09210 222 aa6.72□□□□□ -1.33
USP46-202ENST00000451218 CSF2RAP15509 400 aa6.72□□□□□ -1.33
USP46-202ENST00000451218 GLDCP23378 1020 aa6.72□□□□□ -1.33
USP46-202ENST00000451218 NMBRP28336 390 aa6.72□□□□□ -1.33
USP46-202ENST00000451218 FDFT1P37268 417 aa6.72□□□□□ -1.33
USP46-202ENST00000451218 SNX16P57768 344 aa6.72□□□□□ -1.33
USP46-202ENST00000451218 TPI1P60174 286 aa6.72□□□□□ -1.33
USP46-202ENST00000451218 AP1B1Q10567 949 aa6.72□□□□□ -1.33
USP46-202ENST00000451218 DLG1Q12959 904 aa6.72□□□□□ -1.33
USP46-202ENST00000451218 PDE1CQ14123 709 aaPredicted RBP6.72□□□□□ -1.33
USP46-202ENST00000451218 PDK1Q15118 436 aa6.72□□□□□ -1.33
USP46-202ENST00000451218 BBS9Q3SYG4 887 aa6.72□□□□□ -1.33
USP46-202ENST00000451218 C4orf22Q6V702 233 aa6.72□□□□□ -1.33
USP46-202ENST00000451218 ANKS4BQ8N8V4 417 aa6.72□□□□□ -1.33
USP46-202ENST00000451218 TCP10LQ8TDR4 215 aa6.72□□□□□ -1.33
USP46-202ENST00000451218 PYROXD1Q8WU10 500 aa6.72□□□□□ -1.33
USP46-202ENST00000451218 UTP4Q969X6 686 aaKnown RBP6.72□□□□□ -1.33
USP46-202ENST00000451218 MFSD3Q96ES6 412 aa6.72□□□□□ -1.33
USP46-202ENST00000451218 CEP295NLQ96MC4 621 aa6.72□□□□□ -1.33
USP46-202ENST00000451218 PPP1R12CQ9BZL4 782 aa6.72□□□□□ -1.33
USP46-202ENST00000451218 ZNF395Q9H8N7 513 aaPredicted RBP6.72□□□□□ -1.33
USP46-202ENST00000451218 RXFP1Q9HBX9 757 aa6.72□□□□□ -1.33
USP46-202ENST00000451218 SLC2A6Q9UGQ3 507 aa6.72□□□□□ -1.33
USP46-202ENST00000451218 PCDHB5Q9Y5E4 795 aa6.72□□□□□ -1.33
USP46-202ENST00000451218 TCF20Q9UGU0 1960 aaKnown RBP6.72□□□□□ -1.33
USP46-202ENST00000451218 A0A0D9SEW6 157 aa6.72□□□□□ -1.33
USP46-202ENST00000451218 LCHNA4D1U4 455 aa6.72□□□□□ -1.33
USP46-202ENST00000451218 RASA4BC9J798 803 aa6.72□□□□□ -1.33
USP46-202ENST00000451218 RASA4O43374 803 aa6.72□□□□□ -1.33
USP46-202ENST00000451218 EDF1O60869 148 aaKnown RBP6.72□□□□□ -1.33
USP46-202ENST00000451218 ACVRL1P37023 503 aa6.72□□□□□ -1.33
USP46-202ENST00000451218 CCR2P41597 374 aa6.72□□□□□ -1.33
USP46-202ENST00000451218 ZNF135P52742 658 aaPredicted RBP6.72□□□□□ -1.33
USP46-202ENST00000451218 HEATR6Q6AI08 1181 aaKnown RBP6.72□□□□□ -1.33
USP46-202ENST00000451218 CES3Q6UWW8 571 aa6.72□□□□□ -1.33
USP46-202ENST00000451218 PLD6Q8N2A8 252 aaKnown RBP6.72□□□□□ -1.33
USP46-202ENST00000451218 C2orf15Q8WU43 125 aaKnown RBP6.72□□□□□ -1.33
USP46-202ENST00000451218 SORT1Q99523 831 aa6.72□□□□□ -1.33
USP46-202ENST00000451218 KLF6Q99612 283 aaPredicted RBP6.72□□□□□ -1.33
USP46-202ENST00000451218 UBE2OQ9C0C9 1292 aaKnown RBP6.72□□□□□ -1.33
USP46-202ENST00000451218 FGFR1OP2Q9NVK5 253 aa6.72□□□□□ -1.33
USP46-202ENST00000451218 CXXC1Q9P0U4 656 aaPredicted RBP6.72□□□□□ -1.33
USP46-202ENST00000451218 BCCIPQ9P287 314 aaKnown RBP eCLIP6.72□□□□□ -1.33
USP46-202ENST00000451218 FAM47DPA6NHR8 397 aa6.72□□□□□ -1.33
USP46-202ENST00000451218 STC2O76061 302 aa6.72□□□□□ -1.33
USP46-202ENST00000451218 USP1O94782 785 aa6.72□□□□□ -1.33
USP46-202ENST00000451218 SLC10A7Q0GE19 358 aa6.72□□□□□ -1.33
USP46-202ENST00000451218 SERINC3Q13530 473 aa6.72□□□□□ -1.33
USP46-202ENST00000451218 PACS1Q6VY07 963 aa6.72□□□□□ -1.33
USP46-202ENST00000451218 FITM2Q8N6M3 262 aa6.72□□□□□ -1.33
USP46-202ENST00000451218 PAF1Q8N7H5 531 aa6.72□□□□□ -1.33
USP46-202ENST00000451218 EID2BQ96D98 161 aa6.72□□□□□ -1.33
USP46-202ENST00000451218 ACE2Q9BYF1 805 aaPredicted RBP6.72□□□□□ -1.33
USP46-202ENST00000451218 FRMD8Q9BZ67 464 aaPredicted RBP6.72□□□□□ -1.33
USP46-202ENST00000451218 PPCSQ9HAB8 311 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms