RNA–Protein interactions for RNA: ENST00000451088.6

GTF3C3-207, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-207ENST00000451088 FRAT2O75474 233 aaPredicted RBP4.87□□□□□ -1.63
GTF3C3-207ENST00000451088 FGBP02675 491 aa4.87□□□□□ -1.63
GTF3C3-207ENST00000451088 ADRA1DP25100 572 aa4.87□□□□□ -1.63
GTF3C3-207ENST00000451088 THBS4P35443 961 aa4.87□□□□□ -1.63
GTF3C3-207ENST00000451088 RBM5P52756 815 aaKnown RBP eCLIP4.87□□□□□ -1.63
GTF3C3-207ENST00000451088 COPAP53621 1224 aa4.87□□□□□ -1.63
GTF3C3-207ENST00000451088 PPIL2Q13356 520 aa4.87□□□□□ -1.63
GTF3C3-207ENST00000451088 KCNB1Q14721 858 aa4.87□□□□□ -1.63
GTF3C3-207ENST00000451088 KCNAB1Q14722 419 aa4.87□□□□□ -1.63
GTF3C3-207ENST00000451088 CAVIN4Q5BKX8 364 aa4.87□□□□□ -1.63
GTF3C3-207ENST00000451088 TMTC4Q5T4D3 741 aa4.87□□□□□ -1.63
GTF3C3-207ENST00000451088 C10orf25Q5T742 122 aa4.87□□□□□ -1.63
GTF3C3-207ENST00000451088 VSTM1Q6UX27 236 aa4.87□□□□□ -1.63
GTF3C3-207ENST00000451088 DEF8Q6ZN54 512 aa4.87□□□□□ -1.63
GTF3C3-207ENST00000451088 FAM9BQ8IZU0 186 aa4.87□□□□□ -1.63
GTF3C3-207ENST00000451088 KRT78Q8N1N4 520 aa4.87□□□□□ -1.63
GTF3C3-207ENST00000451088 SDR16C5Q8N3Y7 309 aa4.87□□□□□ -1.63
GTF3C3-207ENST00000451088 C16orf52Q8NHV5 167 aa4.87□□□□□ -1.63
GTF3C3-207ENST00000451088 TBC1D22AQ8WUA7 517 aa4.87□□□□□ -1.63
GTF3C3-207ENST00000451088 ZKSCAN4Q969J2 545 aaPredicted RBP4.87□□□□□ -1.63
GTF3C3-207ENST00000451088 HMCESQ96FZ2 354 aa4.87□□□□□ -1.63
GTF3C3-207ENST00000451088 SNX22Q96L94 193 aa4.87□□□□□ -1.63
GTF3C3-207ENST00000451088 FAM227BQ96M60 508 aa4.87□□□□□ -1.63
GTF3C3-207ENST00000451088 HIST1H2AAQ96QV6 131 aa4.87□□□□□ -1.63
GTF3C3-207ENST00000451088 TRNAU1APQ9NX07 287 aaKnown RBP4.87□□□□□ -1.63
GTF3C3-207ENST00000451088 FZD4Q9ULV1 537 aa4.87□□□□□ -1.63
GTF3C3-207ENST00000451088 SLC27A6Q9Y2P4 619 aa4.87□□□□□ -1.63
GTF3C3-207ENST00000451088 TNPO2O14787 897 aaKnown RBP4.86□□□□□ -1.63
GTF3C3-207ENST00000451088 PLIN1O60240 522 aa4.86□□□□□ -1.63
GTF3C3-207ENST00000451088 TAF5LO75529 589 aa4.86□□□□□ -1.63
GTF3C3-207ENST00000451088 RNF8O76064 485 aa4.86□□□□□ -1.63
GTF3C3-207ENST00000451088 RBL1P28749 1068 aa4.86□□□□□ -1.63
GTF3C3-207ENST00000451088 NTSR1P30989 418 aa4.86□□□□□ -1.63
GTF3C3-207ENST00000451088 HTR7P34969 479 aa4.86□□□□□ -1.63
GTF3C3-207ENST00000451088 GPC5P78333 572 aa4.86□□□□□ -1.63
GTF3C3-207ENST00000451088 GHRHRQ02643 423 aa4.86□□□□□ -1.63
GTF3C3-207ENST00000451088 CFHR1Q03591 330 aa4.86□□□□□ -1.63
GTF3C3-207ENST00000451088 FHL3Q13643 280 aa4.86□□□□□ -1.63
GTF3C3-207ENST00000451088 MRPL10Q7Z7H8 261 aaKnown RBP4.86□□□□□ -1.63
GTF3C3-207ENST00000451088 C14orf80Q86SX3 495 aa4.86□□□□□ -1.63
GTF3C3-207ENST00000451088 C11orf44Q8N8P7 122 aa4.86□□□□□ -1.63
GTF3C3-207ENST00000451088 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.86□□□□□ -1.63
GTF3C3-207ENST00000451088 HS6ST2Q96MM7 605 aa4.86□□□□□ -1.63
GTF3C3-207ENST00000451088 SIGLEC11Q96RL6 698 aa4.86□□□□□ -1.63
GTF3C3-207ENST00000451088 UNKQ9C0B0 810 aaKnown RBP4.86□□□□□ -1.63
GTF3C3-207ENST00000451088 NUP62CLQ9H1M0 184 aa4.86□□□□□ -1.63
GTF3C3-207ENST00000451088 TMOD2Q9NZR1 351 aa4.86□□□□□ -1.63
GTF3C3-207ENST00000451088 SEMA5BQ9P283 1151 aa4.86□□□□□ -1.63
GTF3C3-207ENST00000451088 ZNF212Q9UDV6 495 aa4.86□□□□□ -1.63
GTF3C3-207ENST00000451088 MAFFQ9ULX9 164 aa4.86□□□□□ -1.63
GTF3C3-207ENST00000451088 HPSEQ9Y251 543 aa4.86□□□□□ -1.63
GTF3C3-207ENST00000451088 KIF16BQ96L93 1317 aa4.86□□□□□ -1.63
GTF3C3-207ENST00000451088 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.85□□□□□ -1.63
GTF3C3-207ENST00000451088 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.85□□□□□ -1.63
GTF3C3-207ENST00000451088 PI4K2BG5E9Z4 385 aa4.85□□□□□ -1.63
GTF3C3-207ENST00000451088 CLIC1O00299 241 aa4.85□□□□□ -1.63
GTF3C3-207ENST00000451088 SOCS2O14508 198 aa4.85□□□□□ -1.63
GTF3C3-207ENST00000451088 SNX2O60749 519 aa4.85□□□□□ -1.63
GTF3C3-207ENST00000451088 ANXA2P07355 339 aaKnown RBP4.85□□□□□ -1.63
GTF3C3-207ENST00000451088 IFIT1P09914 478 aaKnown RBP4.85□□□□□ -1.63
GTF3C3-207ENST00000451088 KLRK1P26718 216 aa4.85□□□□□ -1.63
GTF3C3-207ENST00000451088 HOXD9P28356 352 aaPredicted RBP4.85□□□□□ -1.63
GTF3C3-207ENST00000451088 PLCD1P51178 756 aa4.85□□□□□ -1.63
GTF3C3-207ENST00000451088 PPATQ06203 517 aa4.85□□□□□ -1.63
GTF3C3-207ENST00000451088 SRSF1Q07955 248 aaKnown RBP eCLIP4.85□□□□□ -1.632e-7■■□□□ 12.9
GTF3C3-207ENST00000451088 MFSD13AQ14CX5 517 aa4.85□□□□□ -1.63
GTF3C3-207ENST00000451088 PUM3Q15397 648 aaKnown RBP4.85□□□□□ -1.63
GTF3C3-207ENST00000451088 ALDH1L2Q3SY69 923 aa4.85□□□□□ -1.63
GTF3C3-207ENST00000451088 CCDC184Q52MB2 194 aa4.85□□□□□ -1.63
GTF3C3-207ENST00000451088 FKBP1CQ5VVH2 108 aa4.85□□□□□ -1.63
GTF3C3-207ENST00000451088 AWAT2Q6E213 333 aa4.85□□□□□ -1.63
GTF3C3-207ENST00000451088 PPP4R4Q6NUP7 873 aa4.85□□□□□ -1.63
GTF3C3-207ENST00000451088 CLEC9AQ6UXN8 241 aa4.85□□□□□ -1.63
GTF3C3-207ENST00000451088 TECPR1Q7Z6L1 1165 aa4.85□□□□□ -1.63
GTF3C3-207ENST00000451088 CERS5Q8N5B7 392 aa4.85□□□□□ -1.63
GTF3C3-207ENST00000451088 NANOGP1Q8N7R0 232 aa4.85□□□□□ -1.63
GTF3C3-207ENST00000451088 MBD3L2Q8NHZ7 208 aaPredicted RBP4.85□□□□□ -1.63
GTF3C3-207ENST00000451088 IGFBPL1Q8WX77 278 aa4.85□□□□□ -1.63
GTF3C3-207ENST00000451088 BADQ92934 168 aa4.85□□□□□ -1.63
GTF3C3-207ENST00000451088 CUL5Q93034 780 aa4.85□□□□□ -1.63
GTF3C3-207ENST00000451088 PHKBQ93100 1093 aa4.85□□□□□ -1.63
GTF3C3-207ENST00000451088 HIC2Q96JB3 615 aa4.85□□□□□ -1.63
GTF3C3-207ENST00000451088 VPS50Q96JG6 964 aa4.85□□□□□ -1.63
GTF3C3-207ENST00000451088 TMEM39BQ9GZU3 492 aa4.85□□□□□ -1.63
GTF3C3-207ENST00000451088 MTMR4Q9NYA4 1195 aa4.85□□□□□ -1.63
GTF3C3-207ENST00000451088 GJD2Q9UKL4 321 aa4.85□□□□□ -1.63
GTF3C3-207ENST00000451088 UTYO14607 1347 aa4.85□□□□□ -1.63
GTF3C3-207ENST00000451088 MYH3P11055 1940 aa4.85□□□□□ -1.63
GTF3C3-207ENST00000451088 CACNA1FO60840 1977 aa4.85□□□□□ -1.63
GTF3C3-207ENST00000451088 SMCHD1A6NHR9 2005 aa4.85□□□□□ -1.63
GTF3C3-207ENST00000451088 FASNP49327 2511 aaKnown RBP4.84□□□□□ -1.63
GTF3C3-207ENST00000451088 LY6G6EA0A0G2JKS1 128 aa4.84□□□□□ -1.63
GTF3C3-207ENST00000451088 TCP10L2B9ZVM9 353 aa4.84□□□□□ -1.63
GTF3C3-207ENST00000451088 FOXN3O00409 490 aaPredicted RBP4.84□□□□□ -1.63
GTF3C3-207ENST00000451088 CNOT3O75175 753 aaKnown RBP4.84□□□□□ -1.63
GTF3C3-207ENST00000451088 MBPP02686 304 aaPredicted RBP4.84□□□□□ -1.63
GTF3C3-207ENST00000451088 SLC5A1P13866 664 aa4.84□□□□□ -1.63
GTF3C3-207ENST00000451088 MTAPQ13126 283 aa4.84□□□□□ -1.63
GTF3C3-207ENST00000451088 SLC14A1Q13336 389 aa4.84□□□□□ -1.63
GTF3C3-207ENST00000451088 DNASE1L3Q13609 305 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms