RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 ZNF419Q96HQ0 510 aaPredicted RBP14.56□□□□□ -0.08
USP39-207ENST00000450066 PPP1R2P1Q96PQ5 205 aa14.56□□□□□ -0.08
USP39-207ENST00000450066 GCNAQ96QF7 691 aa14.56□□□□□ -0.08
USP39-207ENST00000450066 EBNA1BP2Q99848 306 aaKnown RBP14.56□□□□□ -0.08
USP39-207ENST00000450066 ZC3H7BQ9UGR2 993 aaKnown RBP14.56□□□□□ -0.08
USP39-207ENST00000450066 OBSL1O75147 1896 aa14.55□□□□□ -0.08
USP39-207ENST00000450066 SDR42E2A6NKP2 422 aa14.55□□□□□ -0.08
USP39-207ENST00000450066 H3BNC9 293 aa14.55□□□□□ -0.08
USP39-207ENST00000450066 CPP00450 1065 aa14.55□□□□□ -0.08
USP39-207ENST00000450066 GSTA2P09210 222 aa14.55□□□□□ -0.08
USP39-207ENST00000450066 ATP5DP30049 168 aa14.55□□□□□ -0.08
USP39-207ENST00000450066 IRS1P35568 1242 aa14.55□□□□□ -0.08
USP39-207ENST00000450066 SLC7A9P82251 487 aa14.55□□□□□ -0.08
USP39-207ENST00000450066 CYP4F8P98187 520 aa14.55□□□□□ -0.08
USP39-207ENST00000450066 RASA2Q15283 850 aa14.55□□□□□ -0.08
USP39-207ENST00000450066 SKIDA1Q1XH10 827 aa14.55□□□□□ -0.08
USP39-207ENST00000450066 PDE12Q6L8Q7 609 aaKnown RBP14.55□□□□□ -0.08
USP39-207ENST00000450066 ADAMTS19Q8TE59 1207 aa14.55□□□□□ -0.08
USP39-207ENST00000450066 FBF1Q8TES7 1133 aa14.55□□□□□ -0.08
USP39-207ENST00000450066 SLC22A17Q8WUG5 538 aa14.55□□□□□ -0.08
USP39-207ENST00000450066 WBP2Q969T9 261 aa14.55□□□□□ -0.08
USP39-207ENST00000450066 PRICKLE1Q96MT3 831 aaPredicted RBP14.55□□□□□ -0.08
USP39-207ENST00000450066 FCRL5Q96RD9 977 aa14.55□□□□□ -0.08
USP39-207ENST00000450066 TGS1Q96RS0 853 aaKnown RBP14.55□□□□□ -0.08
USP39-207ENST00000450066 CORO1BQ9BR76 489 aa14.55□□□□□ -0.08
USP39-207ENST00000450066 MLPHQ9BV36 600 aaPredicted RBP14.55□□□□□ -0.08
USP39-207ENST00000450066 ATXN3LQ9H3M9 355 aa14.55□□□□□ -0.08
USP39-207ENST00000450066 GLOD4Q9HC38 313 aa14.55□□□□□ -0.08
USP39-207ENST00000450066 RBM22Q9NW64 420 aaKnown RBP eCLIP14.55□□□□□ -0.08
USP39-207ENST00000450066 EURLQ9NYK6 297 aa14.55□□□□□ -0.08
USP39-207ENST00000450066 SLC24A2Q9UI40 661 aa14.55□□□□□ -0.08
USP39-207ENST00000450066 AAR2Q9Y312 384 aaKnown RBP14.55□□□□□ -0.08
USP39-207ENST00000450066 CPQQ9Y646 472 aa14.55□□□□□ -0.08
USP39-207ENST00000450066 TRANK1O15050 2925 aa14.55□□□□□ -0.08
USP39-207ENST00000450066 CCL16O15467 120 aa14.54□□□□□ -0.08
USP39-207ENST00000450066 PSMD3O43242 534 aa14.54□□□□□ -0.08
USP39-207ENST00000450066 GREM1O60565 184 aa14.54□□□□□ -0.08
USP39-207ENST00000450066 FGF19O95750 216 aa14.54□□□□□ -0.08
USP39-207ENST00000450066 GCAP28676 217 aa14.54□□□□□ -0.08
USP39-207ENST00000450066 GEMIN4P57678 1058 aaKnown RBP14.54□□□□□ -0.08
USP39-207ENST00000450066 RPS24P62847 133 aaKnown RBP14.54□□□□□ -0.08
USP39-207ENST00000450066 SKOR1P84550 965 aa14.54□□□□□ -0.08
USP39-207ENST00000450066 IL10RBQ08334 325 aa14.54□□□□□ -0.08
USP39-207ENST00000450066 SHHQ15465 462 aa14.54□□□□□ -0.08
USP39-207ENST00000450066 TERF2Q15554 542 aa14.54□□□□□ -0.08
USP39-207ENST00000450066 KLHL38Q2WGJ6 581 aa14.54□□□□□ -0.08
USP39-207ENST00000450066 TTC39BQ5VTQ0 682 aaPredicted RBP14.54□□□□□ -0.08
USP39-207ENST00000450066 CHST9Q7L1S5 443 aa14.54□□□□□ -0.08
USP39-207ENST00000450066 OTOP3Q7RTS5 596 aa14.54□□□□□ -0.08
USP39-207ENST00000450066 ARFGAP2Q8N6H7 521 aa14.54□□□□□ -0.08
USP39-207ENST00000450066 XPO6Q96QU8 1125 aaKnown RBP14.54□□□□□ -0.08
USP39-207ENST00000450066 CYTH2Q99418 400 aa14.54□□□□□ -0.08
USP39-207ENST00000450066 MAGEH1Q9H213 219 aa14.54□□□□□ -0.08
USP39-207ENST00000450066 LRRC40Q9H9A6 602 aa14.54□□□□□ -0.08
USP39-207ENST00000450066 SP110Q9HB58 689 aa14.54□□□□□ -0.08
USP39-207ENST00000450066 MAN1C1Q9NR34 630 aa14.54□□□□□ -0.08
USP39-207ENST00000450066 PCDHA11Q9Y5I1 949 aa14.54□□□□□ -0.08
USP39-207ENST00000450066 MAD1L1Q9Y6D9 718 aa14.54□□□□□ -0.08
USP39-207ENST00000450066 MTCL1Q9Y4B5 1905 aaKnown RBP14.54□□□□□ -0.08
USP39-207ENST00000450066 TRAV19A0A0A6YYK7 116 aa14.54□□□□□ -0.08
USP39-207ENST00000450066 A0A1W2PRU2 124 aa14.54□□□□□ -0.08
USP39-207ENST00000450066 TCRBV9S1A1TA0A576 114 aa14.54□□□□□ -0.08
USP39-207ENST00000450066 J3KR12 359 aa14.54□□□□□ -0.08
USP39-207ENST00000450066 TRDMT1O14717 391 aaKnown RBP14.54□□□□□ -0.08
USP39-207ENST00000450066 ANXA9O76027 345 aa14.54□□□□□ -0.08
USP39-207ENST00000450066 CKMP06732 381 aa14.54□□□□□ -0.08
USP39-207ENST00000450066 MYL4P12829 197 aa14.54□□□□□ -0.08
USP39-207ENST00000450066 HOXA9P31269 272 aa14.54□□□□□ -0.08
USP39-207ENST00000450066 HPDP32754 393 aaPredicted RBP14.54□□□□□ -0.08
USP39-207ENST00000450066 MAGEA10P43363 369 aaPredicted RBP14.54□□□□□ -0.08
USP39-207ENST00000450066 EPHA5P54756 1037 aa14.54□□□□□ -0.08
USP39-207ENST00000450066 ERVK-21P61565 698 aa14.54□□□□□ -0.08
USP39-207ENST00000450066 ZXDBP98169 803 aa14.54□□□□□ -0.08
USP39-207ENST00000450066 TNK2Q07912 1038 aa14.54□□□□□ -0.08
USP39-207ENST00000450066 SPARCL1Q14515 664 aa14.54□□□□□ -0.08
USP39-207ENST00000450066 MARC1Q5VT66 337 aa14.54□□□□□ -0.08
USP39-207ENST00000450066 Q6ZNB5 142 aa14.54□□□□□ -0.08
USP39-207ENST00000450066 CCNJLQ8IV13 435 aa14.54□□□□□ -0.08
USP39-207ENST00000450066 MPP5Q8N3R9 675 aa14.54□□□□□ -0.08
USP39-207ENST00000450066 MAB21L3Q8N8X9 362 aa14.54□□□□□ -0.08
USP39-207ENST00000450066 CFAP36Q96G28 342 aa14.54□□□□□ -0.08
USP39-207ENST00000450066 OXNAD1Q96HP4 312 aaPredicted RBP14.54□□□□□ -0.08
USP39-207ENST00000450066 NAT9Q9BTE0 207 aa14.54□□□□□ -0.08
USP39-207ENST00000450066 CTNNAL1Q9UBT7 734 aa14.54□□□□□ -0.08
USP39-207ENST00000450066 A0A1B0GVM2 712 aa14.53□□□□□ -0.08
USP39-207ENST00000450066 TCAF2A6NFQ2 919 aa14.53□□□□□ -0.08
USP39-207ENST00000450066 AP3B1O00203 1094 aa14.53□□□□□ -0.08
USP39-207ENST00000450066 CLASP2O75122 1294 aaKnown RBP14.53□□□□□ -0.08
USP39-207ENST00000450066 NEBLO76041 1014 aa14.53□□□□□ -0.08
USP39-207ENST00000450066 HLA-DQB2P05538 268 aa14.53□□□□□ -0.08
USP39-207ENST00000450066 STX2P32856 288 aa14.53□□□□□ -0.08
USP39-207ENST00000450066 PPP2R2AP63151 447 aa14.53□□□□□ -0.08
USP39-207ENST00000450066 GNA12Q03113 381 aa14.53□□□□□ -0.08
USP39-207ENST00000450066 SETD3Q86TU7 594 aaPredicted RBP14.53□□□□□ -0.08
USP39-207ENST00000450066 ZNF354CQ86Y25 554 aa14.53□□□□□ -0.08
USP39-207ENST00000450066 TEX26Q8N6G2 289 aa14.53□□□□□ -0.08
USP39-207ENST00000450066 NSMCE1Q8WV22 266 aa14.53□□□□□ -0.08
USP39-207ENST00000450066 ARHGEF2Q92974 986 aaKnown RBP14.53□□□□□ -0.08
USP39-207ENST00000450066 STAMBPL1Q96FJ0 436 aa14.53□□□□□ -0.08
USP39-207ENST00000450066 PLAC1Q9HBJ0 212 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms