RNA–Protein interactions for RNA: ENST00000448874.5

PTMA-208, Transcript of prothymosin alpha, humanhuman

TSL 2

Gene PTMA, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMA-208ENST00000448874 ARHGEF38Q9NXL2 777 aa17.09■□□□□ 0.33
PTMA-208ENST00000448874 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.09■□□□□ 0.332e-6■■■■□ 25.9
PTMA-208ENST00000448874 STAP1Q9ULZ2 295 aa17.09■□□□□ 0.33
PTMA-208ENST00000448874 TBC1D30Q9Y2I9 924 aa17.09■□□□□ 0.33
PTMA-208ENST00000448874 SNX10Q9Y5X0 201 aa17.09■□□□□ 0.33
PTMA-208ENST00000448874 FHOD1Q9Y613 1164 aa17.09■□□□□ 0.33
PTMA-208ENST00000448874 LAMA5O15230 3695 aa17.08■□□□□ 0.33
PTMA-208ENST00000448874 ANKRD11Q6UB99 2663 aaPredicted RBP17.08■□□□□ 0.33
PTMA-208ENST00000448874 APC2O95996 2303 aa17.08■□□□□ 0.33
PTMA-208ENST00000448874 ACACAQ13085 2346 aa17.08■□□□□ 0.33
PTMA-208ENST00000448874 DOCK9Q9BZ29 2069 aa17.08■□□□□ 0.33
PTMA-208ENST00000448874 I6L893 689 aaPredicted RBP17.08■□□□□ 0.32
PTMA-208ENST00000448874 PLRG1O43660 514 aaKnown RBP17.08■□□□□ 0.32
PTMA-208ENST00000448874 BNIP3LO60238 219 aa17.08■□□□□ 0.32
PTMA-208ENST00000448874 ITGAVP06756 1048 aa17.08■□□□□ 0.32
PTMA-208ENST00000448874 RHOCP08134 193 aa17.08■□□□□ 0.32
PTMA-208ENST00000448874 ZNF18P17022 549 aa17.08■□□□□ 0.32
PTMA-208ENST00000448874 MAT2AP31153 395 aaKnown RBP17.08■□□□□ 0.32
PTMA-208ENST00000448874 CXCR3P49682 368 aa17.08■□□□□ 0.32
PTMA-208ENST00000448874 BPIFB4P59827 614 aa17.08■□□□□ 0.32
PTMA-208ENST00000448874 CNTN1Q12860 1018 aa17.08■□□□□ 0.32
PTMA-208ENST00000448874 DRAP1Q14919 205 aaPredicted RBP17.08■□□□□ 0.32
PTMA-208ENST00000448874 ALFQ53S48 1182 aa17.08■□□□□ 0.32
PTMA-208ENST00000448874 FAM102AQ5T9C2 384 aaPredicted RBP17.08■□□□□ 0.32
PTMA-208ENST00000448874 AGBL4Q5VU57 503 aa17.08■□□□□ 0.32
PTMA-208ENST00000448874 DHRS13Q6UX07 377 aa17.08■□□□□ 0.32
PTMA-208ENST00000448874 PRPF39Q86UA1 669 aaKnown RBP17.08■□□□□ 0.32
PTMA-208ENST00000448874 SAP25Q8TEE9 199 aa17.08■□□□□ 0.32
PTMA-208ENST00000448874 TUBGCP2Q9BSJ2 902 aa17.08■□□□□ 0.32
PTMA-208ENST00000448874 KDM4CQ9H3R0 1056 aa17.08■□□□□ 0.32
PTMA-208ENST00000448874 WDCPQ9H6R7 721 aa17.08■□□□□ 0.32
PTMA-208ENST00000448874 PPM1HQ9ULR3 514 aa17.08■□□□□ 0.32
PTMA-208ENST00000448874 DMXL2Q8TDJ6 3036 aa17.07■□□□□ 0.32
PTMA-208ENST00000448874 FAM149AA5PLN7 773 aa17.07■□□□□ 0.32
PTMA-208ENST00000448874 TLR4O00206 839 aa17.07■□□□□ 0.32
PTMA-208ENST00000448874 CBX4O00257 560 aa17.07■□□□□ 0.32
PTMA-208ENST00000448874 ENC1O14682 589 aa17.07■□□□□ 0.32
PTMA-208ENST00000448874 MCF2LO15068 1137 aa17.07■□□□□ 0.32
PTMA-208ENST00000448874 ALOX15BO15296 676 aa17.07■□□□□ 0.32
PTMA-208ENST00000448874 YKT6O15498 198 aa17.07■□□□□ 0.32
PTMA-208ENST00000448874 SNAP91O60641 907 aa17.07■□□□□ 0.32
PTMA-208ENST00000448874 SRCP12931 536 aa17.07■□□□□ 0.32
PTMA-208ENST00000448874 CYP11B1P15538 503 aa17.07■□□□□ 0.32
PTMA-208ENST00000448874 EPHA8P29322 1005 aaPredicted RBP17.07■□□□□ 0.32
PTMA-208ENST00000448874 CDH5P33151 784 aaPredicted RBP17.07■□□□□ 0.32
PTMA-208ENST00000448874 ARRB1P49407 418 aaPredicted RBP17.07■□□□□ 0.32
PTMA-208ENST00000448874 DEUP1Q05D60 604 aa17.07■□□□□ 0.32
PTMA-208ENST00000448874 SMAD1Q15797 465 aaKnown RBP17.07■□□□□ 0.32
PTMA-208ENST00000448874 TAF3Q5VWG9 929 aa17.07■□□□□ 0.32
PTMA-208ENST00000448874 TRIM69Q86WT6 500 aa17.07■□□□□ 0.32
PTMA-208ENST00000448874 PGAP3Q96FM1 320 aaPredicted RBP17.07■□□□□ 0.32
PTMA-208ENST00000448874 CNDP2Q96KP4 475 aaKnown RBP17.07■□□□□ 0.32
PTMA-208ENST00000448874 TBCBQ99426 244 aa17.07■□□□□ 0.32
PTMA-208ENST00000448874 PSMB7Q99436 277 aa17.07■□□□□ 0.32
PTMA-208ENST00000448874 ARHGAP20Q9P2F6 1191 aa17.07■□□□□ 0.32
PTMA-208ENST00000448874 HS3ST2Q9Y278 367 aa17.07■□□□□ 0.32
PTMA-208ENST00000448874 GPSM3Q9Y4H4 160 aa17.07■□□□□ 0.32
PTMA-208ENST00000448874 ADAMTS20P59510 1910 aa17.07■□□□□ 0.32
PTMA-208ENST00000448874 FREM2Q5SZK8 3169 aa17.07■□□□□ 0.32
PTMA-208ENST00000448874 PES1O00541 588 aaKnown RBP17.06■□□□□ 0.32
PTMA-208ENST00000448874 LDOC1O95751 146 aaPredicted RBP17.06■□□□□ 0.32
PTMA-208ENST00000448874 MT-CO1P00395 513 aa17.06■□□□□ 0.32
PTMA-208ENST00000448874 F9P00740 461 aa17.06■□□□□ 0.32
PTMA-208ENST00000448874 GABRB2P47870 512 aa17.06■□□□□ 0.32
PTMA-208ENST00000448874 KRT83P78385 493 aa17.06■□□□□ 0.32
PTMA-208ENST00000448874 KCNMA1Q12791 1236 aa17.06■□□□□ 0.32
PTMA-208ENST00000448874 KLHDC7AQ5VTJ3 777 aa17.06■□□□□ 0.32
PTMA-208ENST00000448874 XYLT1Q86Y38 959 aa17.06■□□□□ 0.32
PTMA-208ENST00000448874 ZNF683Q8IZ20 524 aa17.06■□□□□ 0.32
PTMA-208ENST00000448874 OXR1Q8N573 874 aa17.06■□□□□ 0.32
PTMA-208ENST00000448874 EID2Q8N6I1 236 aa17.06■□□□□ 0.32
PTMA-208ENST00000448874 MFSD2AQ8NA29 543 aa17.06■□□□□ 0.32
PTMA-208ENST00000448874 ATP11CQ8NB49 1132 aa17.06■□□□□ 0.32
PTMA-208ENST00000448874 NT5C3BQ969T7 300 aa17.06■□□□□ 0.32
PTMA-208ENST00000448874 C18orf8Q96DM3 657 aa17.06■□□□□ 0.32
PTMA-208ENST00000448874 C2orf49Q9BVC5 232 aaPredicted RBP17.06■□□□□ 0.32
PTMA-208ENST00000448874 TMPRSS4Q9NRS4 437 aa17.06■□□□□ 0.32
PTMA-208ENST00000448874 DACH1Q9UI36 760 aa17.06■□□□□ 0.32
PTMA-208ENST00000448874 VPS51Q9UID3 782 aa17.06■□□□□ 0.32
PTMA-208ENST00000448874 DMTF1Q9Y222 760 aa17.06■□□□□ 0.32
PTMA-208ENST00000448874 PAXBP1Q9Y5B6 917 aa17.06■□□□□ 0.32
PTMA-208ENST00000448874 K7ERQ8 282 aa17.05■□□□□ 0.32
PTMA-208ENST00000448874 CTSLP07711 333 aa17.05■□□□□ 0.32
PTMA-208ENST00000448874 RRM1P23921 792 aa17.05■□□□□ 0.32
PTMA-208ENST00000448874 ERCC5P28715 1186 aaPredicted RBP17.05■□□□□ 0.32
PTMA-208ENST00000448874 NUDT1P36639 197 aa17.05■□□□□ 0.32
PTMA-208ENST00000448874 FLT3P36888 993 aa17.05■□□□□ 0.32
PTMA-208ENST00000448874 SCNN1AP37088 669 aa17.05■□□□□ 0.32
PTMA-208ENST00000448874 BNIP3Q12983 259 aa17.05■□□□□ 0.32
PTMA-208ENST00000448874 DNAJC3Q13217 504 aa17.05■□□□□ 0.32
PTMA-208ENST00000448874 CAMK2BQ13554 666 aa17.05■□□□□ 0.32
PTMA-208ENST00000448874 SLC25A52Q3SY17 297 aa17.05■□□□□ 0.32
PTMA-208ENST00000448874 C2CD6Q53TS8 623 aa17.05■□□□□ 0.32
PTMA-208ENST00000448874 C19orf48Q6RUI8 117 aa17.05■□□□□ 0.32
PTMA-208ENST00000448874 LRRC31Q6UY01 552 aa17.05■□□□□ 0.32
PTMA-208ENST00000448874 TFAP2DQ7Z6R9 452 aa17.05■□□□□ 0.32
PTMA-208ENST00000448874 SETD3Q86TU7 594 aaPredicted RBP17.05■□□□□ 0.32
PTMA-208ENST00000448874 NOP9Q86U38 636 aaKnown RBP17.05■□□□□ 0.32
PTMA-208ENST00000448874 IQCHQ86VS3 1027 aa17.05■□□□□ 0.32
PTMA-208ENST00000448874 ERICH1Q86X53 443 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms