RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 CRTAMO95727 393 aa13.93□□□□□ -0.18
POLR1B-209ENST00000448770 NMBRP28336 390 aa13.93□□□□□ -0.18
POLR1B-209ENST00000448770 MYBPC1Q00872 1141 aa13.93□□□□□ -0.18
POLR1B-209ENST00000448770 SOX4Q06945 474 aaPredicted RBP13.93□□□□□ -0.18
POLR1B-209ENST00000448770 IFRD2Q12894 506 aaPredicted RBP13.93□□□□□ -0.18
POLR1B-209ENST00000448770 NME3Q13232 169 aa13.93□□□□□ -0.18
POLR1B-209ENST00000448770 ZNF460Q14592 562 aa13.93□□□□□ -0.18
POLR1B-209ENST00000448770 GRM3Q14832 879 aa13.93□□□□□ -0.18
POLR1B-209ENST00000448770 PAFAH1B3Q15102 231 aaKnown RBP13.93□□□□□ -0.18
POLR1B-209ENST00000448770 ARMC3Q5W041 872 aa13.93□□□□□ -0.18
POLR1B-209ENST00000448770 SPATA24Q86W54 205 aa13.93□□□□□ -0.18
POLR1B-209ENST00000448770 MARVELD2Q8N4S9 558 aa13.93□□□□□ -0.18
POLR1B-209ENST00000448770 RNF217Q8TC41 542 aa13.93□□□□□ -0.18
POLR1B-209ENST00000448770 DNAJC1Q96KC8 554 aaKnown RBP13.93□□□□□ -0.18
POLR1B-209ENST00000448770 OXSMQ9NWU1 459 aa13.93□□□□□ -0.18
POLR1B-209ENST00000448770 UBP1Q9NZI7 540 aa13.93□□□□□ -0.18
POLR1B-209ENST00000448770 KLHL8Q9P2G9 620 aaPredicted RBP13.93□□□□□ -0.18
POLR1B-209ENST00000448770 SLC4A7Q9Y6M7 1214 aa13.93□□□□□ -0.18
POLR1B-209ENST00000448770 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.92□□□□□ -0.18
POLR1B-209ENST00000448770 PIGNO95427 931 aa13.92□□□□□ -0.18
POLR1B-209ENST00000448770 AP2A1O95782 977 aa13.92□□□□□ -0.18
POLR1B-209ENST00000448770 FYNP06241 537 aa13.92□□□□□ -0.18
POLR1B-209ENST00000448770 GABRB3P28472 473 aa13.92□□□□□ -0.18
POLR1B-209ENST00000448770 SPRP35270 261 aaPredicted RBP13.92□□□□□ -0.18
POLR1B-209ENST00000448770 AVPR1AP37288 418 aa13.92□□□□□ -0.18
POLR1B-209ENST00000448770 GARSP41250 739 aaKnown RBP13.92□□□□□ -0.18
POLR1B-209ENST00000448770 LAMB3Q13751 1172 aa13.92□□□□□ -0.18
POLR1B-209ENST00000448770 ARL13AQ5H913 290 aaPredicted RBP13.92□□□□□ -0.18
POLR1B-209ENST00000448770 TAPT1Q6NXT6 567 aa13.92□□□□□ -0.18
POLR1B-209ENST00000448770 UNC93AQ86WB7 457 aa13.92□□□□□ -0.18
POLR1B-209ENST00000448770 CRYBG2Q8N1P7 616 aa13.92□□□□□ -0.18
POLR1B-209ENST00000448770 ICA1LQ8NDH6 482 aa13.92□□□□□ -0.18
POLR1B-209ENST00000448770 VPS39Q96JC1 886 aa13.92□□□□□ -0.18
POLR1B-209ENST00000448770 BTBD9Q96Q07 612 aa13.92□□□□□ -0.18
POLR1B-209ENST00000448770 KCNK16Q96T55 309 aa13.92□□□□□ -0.18
POLR1B-209ENST00000448770 NPY6RQ99463 290 aa13.92□□□□□ -0.18
POLR1B-209ENST00000448770 NAT9Q9BTE0 207 aa13.92□□□□□ -0.18
POLR1B-209ENST00000448770 FAM96AQ9H5X1 160 aa13.92□□□□□ -0.18
POLR1B-209ENST00000448770 FAM124BQ9H5Z6 455 aaPredicted RBP13.92□□□□□ -0.18
POLR1B-209ENST00000448770 LRRC40Q9H9A6 602 aa13.92□□□□□ -0.18
POLR1B-209ENST00000448770 COPS7BQ9H9Q2 264 aaPredicted RBP13.92□□□□□ -0.18
POLR1B-209ENST00000448770 CASS4Q9NQ75 786 aa13.92□□□□□ -0.18
POLR1B-209ENST00000448770 IARS2Q9NSE4 1012 aaKnown RBP13.92□□□□□ -0.18
POLR1B-209ENST00000448770 KLK14Q9P0G3 267 aa13.92□□□□□ -0.18
POLR1B-209ENST00000448770 ADAM28Q9UKQ2 775 aa13.92□□□□□ -0.18
POLR1B-209ENST00000448770 COMMD3-BMI1R4GMX3 469 aa13.92□□□□□ -0.18
POLR1B-209ENST00000448770 A0A0G2JLL6 359 aaPredicted RBP13.92□□□□□ -0.18
POLR1B-209ENST00000448770 M0QYT0 321 aa13.92□□□□□ -0.18
POLR1B-209ENST00000448770 NRP1O14786 923 aa13.92□□□□□ -0.18
POLR1B-209ENST00000448770 ERCC2P18074 760 aa13.92□□□□□ -0.18
POLR1B-209ENST00000448770 SAT1P21673 171 aa13.92□□□□□ -0.18
POLR1B-209ENST00000448770 GRIA4P48058 902 aa13.92□□□□□ -0.18
POLR1B-209ENST00000448770 INHBCP55103 352 aa13.92□□□□□ -0.18
POLR1B-209ENST00000448770 ADGRE1Q14246 886 aa13.92□□□□□ -0.18
POLR1B-209ENST00000448770 TTLL4Q14679 1199 aa13.92□□□□□ -0.18
POLR1B-209ENST00000448770 PDK1Q15118 436 aa13.92□□□□□ -0.18
POLR1B-209ENST00000448770 FSCBQ5H9T9 825 aa13.92□□□□□ -0.18
POLR1B-209ENST00000448770 PAQR9Q6ZVX9 377 aa13.92□□□□□ -0.18
POLR1B-209ENST00000448770 PRRT2Q7Z6L0 340 aaPredicted RBP13.92□□□□□ -0.18
POLR1B-209ENST00000448770 NT5DC4Q86YG4 428 aa13.92□□□□□ -0.18
POLR1B-209ENST00000448770 MFSD6LQ8IWD5 586 aa13.92□□□□□ -0.18
POLR1B-209ENST00000448770 SPATA6LQ8N4H0 392 aa13.92□□□□□ -0.18
POLR1B-209ENST00000448770 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.92□□□□□ -0.18
POLR1B-209ENST00000448770 NT5C3BQ969T7 300 aa13.92□□□□□ -0.18
POLR1B-209ENST00000448770 PKP2Q99959 881 aa13.92□□□□□ -0.18
POLR1B-209ENST00000448770 ACE2Q9BYF1 805 aaPredicted RBP13.92□□□□□ -0.18
POLR1B-209ENST00000448770 PRDM16Q9HAZ2 1276 aa13.92□□□□□ -0.18
POLR1B-209ENST00000448770 RCOR3Q9P2K3 495 aaPredicted RBP13.92□□□□□ -0.18
POLR1B-209ENST00000448770 PPP1R1BQ9UD71 204 aaPredicted RBP13.92□□□□□ -0.18
POLR1B-209ENST00000448770 SLC39A10Q9ULF5 831 aa13.92□□□□□ -0.18
POLR1B-209ENST00000448770 DNAH12Q6ZR08 3092 aa13.92□□□□□ -0.18
POLR1B-209ENST00000448770 TMEM114B3SHH9 223 aa13.91□□□□□ -0.18
POLR1B-209ENST00000448770 ADM5C9JUS6 153 aa13.91□□□□□ -0.18
POLR1B-209ENST00000448770 CFLARO15519 480 aa13.91□□□□□ -0.18
POLR1B-209ENST00000448770 DENRO43583 198 aaKnown RBP13.91□□□□□ -0.18
POLR1B-209ENST00000448770 RECQL4O94761 1208 aa13.91□□□□□ -0.18
POLR1B-209ENST00000448770 DESP17661 470 aa13.91□□□□□ -0.18
POLR1B-209ENST00000448770 CYP2B6P20813 491 aa13.91□□□□□ -0.18
POLR1B-209ENST00000448770 ACAT1P24752 427 aaKnown RBP13.91□□□□□ -0.18
POLR1B-209ENST00000448770 SCNN1AP37088 669 aa13.91□□□□□ -0.18
POLR1B-209ENST00000448770 MPP3Q13368 585 aa13.91□□□□□ -0.18
POLR1B-209ENST00000448770 KCTD2Q14681 263 aa13.91□□□□□ -0.18
POLR1B-209ENST00000448770 C6orf52Q5T4I8 152 aa13.91□□□□□ -0.18
POLR1B-209ENST00000448770 TSTD2Q5T7W7 516 aa13.91□□□□□ -0.18
POLR1B-209ENST00000448770 ARMCX2Q7L311 632 aa13.91□□□□□ -0.18
POLR1B-209ENST00000448770 KCNMB4Q86W47 210 aa13.91□□□□□ -0.18
POLR1B-209ENST00000448770 PSTKQ8IV42 348 aaKnown RBP13.91□□□□□ -0.18
POLR1B-209ENST00000448770 SULF1Q8IWU6 871 aa13.91□□□□□ -0.18
POLR1B-209ENST00000448770 KCTD4Q8WVF5 259 aa13.91□□□□□ -0.18
POLR1B-209ENST00000448770 CNDP1Q96KN2 507 aa13.91□□□□□ -0.18
POLR1B-209ENST00000448770 FERMT1Q9BQL6 677 aa13.91□□□□□ -0.18
POLR1B-209ENST00000448770 RBM38Q9H0Z9 239 aaKnown RBP13.91□□□□□ -0.18
POLR1B-209ENST00000448770 RNF39Q9H2S5 420 aa13.91□□□□□ -0.18
POLR1B-209ENST00000448770 VCX3BQ9H321 246 aa13.91□□□□□ -0.18
POLR1B-209ENST00000448770 SUDS3Q9H7L9 328 aaPredicted RBP13.91□□□□□ -0.18
POLR1B-209ENST00000448770 GPRC5DQ9NZD1 345 aa13.91□□□□□ -0.18
POLR1B-209ENST00000448770 APPL1Q9UKG1 709 aa13.91□□□□□ -0.18
POLR1B-209ENST00000448770 AP4B1Q9Y6B7 739 aa13.91□□□□□ -0.18
POLR1B-209ENST00000448770 EEF2KO00418 725 aaKnown RBP13.91□□□□□ -0.18
POLR1B-209ENST00000448770 DAB1O75553 588 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms