RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	STAMBP	O95630	424 aa		12.78	□□□□□ -0.36
DDR1-238	ENST00000446312	SLC4A1	P02730	911 aa		12.78	□□□□□ -0.36
DDR1-238	ENST00000446312	C2	P06681	752 aa		12.78	□□□□□ -0.36
DDR1-238	ENST00000446312	MYCLP1	P12525	358 aa	Predicted RBP	12.78	□□□□□ -0.36
DDR1-238	ENST00000446312	PRKCH	P24723	683 aa		12.78	□□□□□ -0.36
DDR1-238	ENST00000446312	PIK3R1	P27986	724 aa		12.78	□□□□□ -0.36
DDR1-238	ENST00000446312	SH3BGR	P55822	239 aa	Predicted RBP	12.78	□□□□□ -0.36
DDR1-238	ENST00000446312	GJA9	P57773	515 aa		12.78	□□□□□ -0.36
DDR1-238	ENST00000446312	SLC6A3	Q01959	620 aa		12.78	□□□□□ -0.36
DDR1-238	ENST00000446312	CACNB2	Q08289	660 aa	Predicted RBP	12.78	□□□□□ -0.36
DDR1-238	ENST00000446312	WASHC5	Q12768	1159 aa		12.78	□□□□□ -0.36
DDR1-238	ENST00000446312	TNFAIP1	Q13829	316 aa		12.78	□□□□□ -0.36
DDR1-238	ENST00000446312	USP10	Q14694	798 aa	Known RBP	12.78	□□□□□ -0.36
DDR1-238	ENST00000446312	SURF1	Q15526	300 aa		12.78	□□□□□ -0.36
DDR1-238	ENST00000446312	PCSK7	Q16549	785 aa		12.78	□□□□□ -0.36
DDR1-238	ENST00000446312	LSM12	Q3MHD2	195 aa	Known RBP	12.78	□□□□□ -0.36
DDR1-238	ENST00000446312	BOLA3	Q53S33	107 aa		12.78	□□□□□ -0.36
DDR1-238	ENST00000446312	ARL13A	Q5H913	290 aa	Predicted RBP	12.78	□□□□□ -0.36
DDR1-238	ENST00000446312	RWDD4	Q6NW29	188 aa	Known RBP	12.78	□□□□□ -0.36
DDR1-238	ENST00000446312	CDKL3	Q8IVW4	592 aa	Predicted RBP	12.78	□□□□□ -0.36
DDR1-238	ENST00000446312	LRRC43	Q8N309	656 aa		12.78	□□□□□ -0.36
DDR1-238	ENST00000446312	OR9I1	Q8NGQ6	314 aa		12.78	□□□□□ -0.36
DDR1-238	ENST00000446312	EIF2A	Q9BY44	585 aa	Known RBP	12.78	□□□□□ -0.36
DDR1-238	ENST00000446312	RHOBTB2	Q9BYZ6	727 aa		12.78	□□□□□ -0.36
DDR1-238	ENST00000446312	CHST12	Q9NRB3	414 aa		12.78	□□□□□ -0.36
DDR1-238	ENST00000446312	RUVBL2	Q9Y230	463 aa	Known RBP	12.78	□□□□□ -0.36
DDR1-238	ENST00000446312	EFR3B	Q9Y2G0	817 aa		12.78	□□□□□ -0.36
DDR1-238	ENST00000446312	SNX13	Q9Y5W8	968 aa		12.78	□□□□□ -0.36
DDR1-238	ENST00000446312	BEST1	O76090	585 aa		12.78	□□□□□ -0.36
DDR1-238	ENST00000446312	ASL	P04424	464 aa		12.78	□□□□□ -0.36
DDR1-238	ENST00000446312	CKMT2	P17540	419 aa		12.78	□□□□□ -0.36
DDR1-238	ENST00000446312	CES1	P23141	567 aa		12.78	□□□□□ -0.36
DDR1-238	ENST00000446312	CRABP2	P29373	138 aa		12.78	□□□□□ -0.36
DDR1-238	ENST00000446312	LRRC8B	Q6P9F7	803 aa		12.78	□□□□□ -0.36
DDR1-238	ENST00000446312	CATSPERG	Q6ZRH7	1159 aa		12.78	□□□□□ -0.36
DDR1-238	ENST00000446312	DSEL	Q8IZU8	1212 aa		12.78	□□□□□ -0.36
DDR1-238	ENST00000446312	ZNF567	Q8N184	647 aa		12.78	□□□□□ -0.36
DDR1-238	ENST00000446312	FBXW8	Q8N3Y1	598 aa		12.78	□□□□□ -0.36
DDR1-238	ENST00000446312	SDR16C5	Q8N3Y7	309 aa		12.78	□□□□□ -0.36
DDR1-238	ENST00000446312	METTL25	Q8N6Q8	603 aa		12.78	□□□□□ -0.36
DDR1-238	ENST00000446312	SLC7A14	Q8TBB6	771 aa		12.78	□□□□□ -0.36
DDR1-238	ENST00000446312	RNF34	Q969K3	372 aa		12.78	□□□□□ -0.36
DDR1-238	ENST00000446312	SPON1	Q9HCB6	807 aa		12.78	□□□□□ -0.36
DDR1-238	ENST00000446312	ARHGAP26	Q9UNA1	814 aa		12.78	□□□□□ -0.36
DDR1-238	ENST00000446312	GNE	Q9Y223	722 aa	Known RBP	12.78	□□□□□ -0.36
DDR1-238	ENST00000446312	SAC3D1	A6NKF1	404 aa		12.77	□□□□□ -0.36
DDR1-238	ENST00000446312	KCNU1	A8MYU2	1149 aa		12.77	□□□□□ -0.36
DDR1-238	ENST00000446312	ZBTB42	B2RXF5	422 aa		12.77	□□□□□ -0.36
DDR1-238	ENST00000446312	ADM5	C9JUS6	153 aa		12.77	□□□□□ -0.36
DDR1-238	ENST00000446312	CRTAM	O95727	393 aa		12.77	□□□□□ -0.36
DDR1-238	ENST00000446312	JCHAIN	P01591	159 aa		12.77	□□□□□ -0.36
DDR1-238	ENST00000446312	CASP2	P42575	452 aa		12.77	□□□□□ -0.36
DDR1-238	ENST00000446312	DPP6	P42658	865 aa		12.77	□□□□□ -0.36
DDR1-238	ENST00000446312	GABRB2	P47870	512 aa		12.77	□□□□□ -0.36
DDR1-238	ENST00000446312	CHN2	P52757	468 aa		12.77	□□□□□ -0.36
DDR1-238	ENST00000446312	MPP1	Q00013	466 aa		12.77	□□□□□ -0.36
DDR1-238	ENST00000446312	MBTD1	Q05BQ5	628 aa		12.77	□□□□□ -0.36
DDR1-238	ENST00000446312	LSAMP	Q13449	338 aa		12.77	□□□□□ -0.36
DDR1-238	ENST00000446312	TARBP2	Q15633	366 aa	Known RBP	12.77	□□□□□ -0.36
DDR1-238	ENST00000446312	DGKD	Q16760	1214 aa		12.77	□□□□□ -0.36
DDR1-238	ENST00000446312	NCBP2-AS2	Q69YL0	99 aa		12.77	□□□□□ -0.36
DDR1-238	ENST00000446312	NT5DC4	Q86YG4	428 aa		12.77	□□□□□ -0.36
DDR1-238	ENST00000446312	LILRA2	Q8N149	483 aa		12.77	□□□□□ -0.36
DDR1-238	ENST00000446312	SREK1	Q8WXA9	508 aa	Known RBP	12.77	□□□□□ -0.36
DDR1-238	ENST00000446312	EME1	Q96AY2	570 aa		12.77	□□□□□ -0.36
DDR1-238	ENST00000446312	SLC4A5	Q9BY07	1137 aa		12.77	□□□□□ -0.36
DDR1-238	ENST00000446312	CDHR5	Q9HBB8	845 aa		12.77	□□□□□ -0.36
DDR1-238	ENST00000446312	TXNRD2	Q9NNW7	524 aa		12.77	□□□□□ -0.36
DDR1-238	ENST00000446312	ZDHHC2	Q9UIJ5	367 aa		12.77	□□□□□ -0.36
DDR1-238	ENST00000446312	FBXO9	Q9UK97	447 aa	Predicted RBP	12.77	□□□□□ -0.36
DDR1-238	ENST00000446312	AURKC	Q9UQB9	309 aa		12.77	□□□□□ -0.36
DDR1-238	ENST00000446312	GLRA3	O75311	464 aa		12.77	□□□□□ -0.37
DDR1-238	ENST00000446312	MT-CYB	P00156	380 aa	Predicted RBP	12.77	□□□□□ -0.37
DDR1-238	ENST00000446312	PRKCG	P05129	697 aa		12.77	□□□□□ -0.37
DDR1-238	ENST00000446312	NMBR	P28336	390 aa		12.77	□□□□□ -0.37
DDR1-238	ENST00000446312	FDFT1	P37268	417 aa		12.77	□□□□□ -0.37
DDR1-238	ENST00000446312	GRIA4	P48058	902 aa		12.77	□□□□□ -0.37
DDR1-238	ENST00000446312	TMED10	P49755	219 aa	Known RBP	12.77	□□□□□ -0.37
DDR1-238	ENST00000446312	CEACAM7	Q14002	265 aa		12.77	□□□□□ -0.37
DDR1-238	ENST00000446312	PPP1R3A	Q16821	1122 aa		12.77	□□□□□ -0.37
DDR1-238	ENST00000446312	GEN1	Q17RS7	908 aa		12.77	□□□□□ -0.37
DDR1-238	ENST00000446312	MTX3	Q5HYI7	312 aa		12.77	□□□□□ -0.37
DDR1-238	ENST00000446312	CHST15	Q7LFX5	561 aa	Predicted RBP	12.77	□□□□□ -0.37
DDR1-238	ENST00000446312	ZNF354C	Q86Y25	554 aa		12.77	□□□□□ -0.37
DDR1-238	ENST00000446312	RTKN2	Q8IZC4	609 aa		12.77	□□□□□ -0.37
DDR1-238	ENST00000446312	SIX5	Q8N196	739 aa		12.77	□□□□□ -0.37
DDR1-238	ENST00000446312	RNF169	Q8NCN4	708 aa		12.77	□□□□□ -0.37
DDR1-238	ENST00000446312	KCNN1	Q92952	543 aa		12.77	□□□□□ -0.37
DDR1-238	ENST00000446312	CMTM5	Q96DZ9	223 aa		12.77	□□□□□ -0.37
DDR1-238	ENST00000446312	CIB1	Q99828	191 aa		12.77	□□□□□ -0.37
DDR1-238	ENST00000446312	LHX5	Q9H2C1	402 aa		12.77	□□□□□ -0.37
DDR1-238	ENST00000446312	SOX17	Q9H6I2	414 aa	Predicted RBP	12.77	□□□□□ -0.37
DDR1-238	ENST00000446312	TMEM134	Q9H6X4	195 aa		12.77	□□□□□ -0.37
DDR1-238	ENST00000446312	CIDEB	Q9UHD4	219 aa		12.77	□□□□□ -0.37
DDR1-238	ENST00000446312	CROT	Q9UKG9	612 aa		12.77	□□□□□ -0.37
DDR1-238	ENST00000446312	KLHL2	O95198	593 aa		12.77	□□□□□ -0.37
DDR1-238	ENST00000446312	GRM3	Q14832	879 aa		12.77	□□□□□ -0.37
DDR1-238	ENST00000446312	ANO4	Q32M45	955 aa		12.77	□□□□□ -0.37
DDR1-238	ENST00000446312	MYLK3	Q32MK0	819 aa		12.77	□□□□□ -0.37
DDR1-238	ENST00000446312	IPMK	Q8NFU5	416 aa		12.77	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms