RNA–Protein interactions for RNA: ENST00000438191.1

RPE-209, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 5

Gene RPE, Length 426 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-209ENST00000438191 CRELD2Q6UXH1 353 aaPredicted RBP9.4□□□□□ -0.9
RPE-209ENST00000438191 RD3Q7Z3Z2 195 aa9.4□□□□□ -0.9
RPE-209ENST00000438191 TMEM135Q86UB9 458 aa9.4□□□□□ -0.9
RPE-209ENST00000438191 NXPE1Q8N323 547 aa9.4□□□□□ -0.9
RPE-209ENST00000438191 CSGALNACT2Q8N6G5 542 aa9.4□□□□□ -0.9
RPE-209ENST00000438191 Q8N9G6 341 aaPredicted RBP9.4□□□□□ -0.9
RPE-209ENST00000438191 SYT2Q8N9I0 419 aaPredicted RBP9.4□□□□□ -0.9
RPE-209ENST00000438191 KDM1BQ8NB78 822 aa9.4□□□□□ -0.9
RPE-209ENST00000438191 WFDC5Q8TCV5 224 aa9.4□□□□□ -0.9
RPE-209ENST00000438191 BTN2A2Q8WVV5 523 aa9.4□□□□□ -0.9
RPE-209ENST00000438191 BRF1Q92994 677 aa9.4□□□□□ -0.9
RPE-209ENST00000438191 ART4Q93070 314 aa9.4□□□□□ -0.9
RPE-209ENST00000438191 TTC17Q96AE7 1141 aa9.4□□□□□ -0.9
RPE-209ENST00000438191 C14orf79Q96F83 325 aa9.4□□□□□ -0.9
RPE-209ENST00000438191 FAM84AQ96KN4 292 aa9.4□□□□□ -0.9
RPE-209ENST00000438191 LRRC61Q9BV99 259 aa9.4□□□□□ -0.9
RPE-209ENST00000438191 CLPBQ9H078 707 aa9.4□□□□□ -0.9
RPE-209ENST00000438191 MRPL40Q9NQ50 206 aaKnown RBP9.4□□□□□ -0.9
RPE-209ENST00000438191 RCOR3Q9P2K3 495 aaPredicted RBP9.4□□□□□ -0.9
RPE-209ENST00000438191 SIX4Q9UIU6 781 aa9.4□□□□□ -0.9
RPE-209ENST00000438191 KIAA1024Q9UPX6 916 aa9.4□□□□□ -0.9
RPE-209ENST00000438191 NEU2Q9Y3R4 380 aa9.4□□□□□ -0.9
RPE-209ENST00000438191 PCDHB3Q9Y5E6 796 aa9.4□□□□□ -0.9
RPE-209ENST00000438191 PCDHGA9Q9Y5G4 932 aaKnown RBP9.4□□□□□ -0.9
RPE-209ENST00000438191 HS3ST3A1Q9Y663 406 aa9.4□□□□□ -0.9
RPE-209ENST00000438191 ZSCAN5CA6NGD5 496 aaPredicted RBP9.39□□□□□ -0.91
RPE-209ENST00000438191 HGSO14964 777 aaPredicted RBP9.39□□□□□ -0.91
RPE-209ENST00000438191 SPINT1O43278 529 aa9.39□□□□□ -0.91
RPE-209ENST00000438191 ASLP04424 464 aa9.39□□□□□ -0.91
RPE-209ENST00000438191 HMBSP08397 361 aa9.39□□□□□ -0.91
RPE-209ENST00000438191 F8A1P23610 371 aa9.39□□□□□ -0.91
RPE-209ENST00000438191 NCKAP1LP55160 1127 aa9.39□□□□□ -0.91
RPE-209ENST00000438191 CCT2P78371 535 aaKnown RBP9.39□□□□□ -0.91
RPE-209ENST00000438191 CNTN1Q12860 1018 aa9.39□□□□□ -0.91
RPE-209ENST00000438191 FOXD4Q12950 439 aaPredicted RBP9.39□□□□□ -0.91
RPE-209ENST00000438191 SEMA5AQ13591 1074 aa9.39□□□□□ -0.91
RPE-209ENST00000438191 ERV3-1Q14264 604 aa9.39□□□□□ -0.91
RPE-209ENST00000438191 ZNF630Q2M218 657 aaPredicted RBP9.39□□□□□ -0.91
RPE-209ENST00000438191 C10orf120Q5SQS8 335 aa9.39□□□□□ -0.91
RPE-209ENST00000438191 TMEM198Q66K66 360 aa9.39□□□□□ -0.91
RPE-209ENST00000438191 KYAT3Q6YP21 454 aaKnown RBP9.39□□□□□ -0.91
RPE-209ENST00000438191 ZNF517Q6ZMY9 492 aaPredicted RBP9.39□□□□□ -0.91
RPE-209ENST00000438191 PAQR9Q6ZVX9 377 aa9.39□□□□□ -0.91
RPE-209ENST00000438191 OR6C4Q8NGE1 309 aa9.39□□□□□ -0.91
RPE-209ENST00000438191 PNPLA2Q96AD5 504 aa9.39□□□□□ -0.91
RPE-209ENST00000438191 CENPTQ96BT3 561 aa9.39□□□□□ -0.91
RPE-209ENST00000438191 TBATAQ96M53 351 aa9.39□□□□□ -0.91
RPE-209ENST00000438191 MRPL45Q9BRJ2 306 aaKnown RBP9.39□□□□□ -0.91
RPE-209ENST00000438191 SLC25A23Q9BV35 468 aa9.39□□□□□ -0.91
RPE-209ENST00000438191 ASPSCR1Q9BZE9 553 aa9.39□□□□□ -0.91
RPE-209ENST00000438191 CXXC4Q9H2H0 198 aa9.39□□□□□ -0.91
RPE-209ENST00000438191 DPEP3Q9H4B8 488 aa9.39□□□□□ -0.91
RPE-209ENST00000438191 DMAP1Q9NPF5 467 aaPredicted RBP9.39□□□□□ -0.91
RPE-209ENST00000438191 ANO2Q9NQ90 1003 aa9.39□□□□□ -0.91
RPE-209ENST00000438191 DDX19AQ9NUU7 478 aaKnown RBP9.39□□□□□ -0.91
RPE-209ENST00000438191 SIRPGQ9P1W8 387 aa9.39□□□□□ -0.91
RPE-209ENST00000438191 APOBEC3BQ9UH17 382 aaKnown RBP9.39□□□□□ -0.91
RPE-209ENST00000438191 APPL1Q9UKG1 709 aa9.39□□□□□ -0.91
RPE-209ENST00000438191 ITGA11Q9UKX5 1188 aa9.39□□□□□ -0.91
RPE-209ENST00000438191 SARDHQ9UL12 918 aa9.39□□□□□ -0.91
RPE-209ENST00000438191 PCDHGB6Q9Y5F9 930 aa9.39□□□□□ -0.91
RPE-209ENST00000438191 ANKRD63C9JTQ0 380 aa9.38□□□□□ -0.91
RPE-209ENST00000438191 E9PMD0 336 aa9.38□□□□□ -0.91
RPE-209ENST00000438191 IL18RAPO95256 599 aa9.38□□□□□ -0.91
RPE-209ENST00000438191 F9P00740 461 aa9.38□□□□□ -0.91
RPE-209ENST00000438191 KRT19P08727 400 aa9.38□□□□□ -0.91
RPE-209ENST00000438191 VAV1P15498 845 aa9.38□□□□□ -0.91
RPE-209ENST00000438191 TSHRP16473 764 aa9.38□□□□□ -0.91
RPE-209ENST00000438191 HTR1EP28566 365 aa9.38□□□□□ -0.91
RPE-209ENST00000438191 GNL1P36915 607 aaPredicted RBP9.38□□□□□ -0.91
RPE-209ENST00000438191 CCT6AP40227 531 aaKnown RBP9.38□□□□□ -0.91
RPE-209ENST00000438191 RBP5P82980 135 aa9.38□□□□□ -0.91
RPE-209ENST00000438191 COG7P83436 770 aa9.38□□□□□ -0.91
RPE-209ENST00000438191 CDK18Q07002 472 aa9.38□□□□□ -0.91
RPE-209ENST00000438191 ELAVL3Q14576 367 aaKnown RBP9.38□□□□□ -0.91
RPE-209ENST00000438191 VWA2Q5GFL6 755 aa9.38□□□□□ -0.91
RPE-209ENST00000438191 NEK5Q6P3R8 708 aa9.38□□□□□ -0.91
RPE-209ENST00000438191 BNC2Q6ZN30 1099 aaPredicted RBP9.38□□□□□ -0.91
RPE-209ENST00000438191 Q6ZUG5 572 aa9.38□□□□□ -0.91
RPE-209ENST00000438191 PARS2Q7L3T8 475 aaKnown RBP9.38□□□□□ -0.91
RPE-209ENST00000438191 SPRED1Q7Z699 444 aa9.38□□□□□ -0.91
RPE-209ENST00000438191 FAM35AQ86V20 835 aa9.38□□□□□ -0.91
RPE-209ENST00000438191 HORMAD1Q86X24 394 aa9.38□□□□□ -0.91
RPE-209ENST00000438191 SMC5Q8IY18 1101 aa9.38□□□□□ -0.91
RPE-209ENST00000438191 CISD2Q8N5K1 135 aaKnown RBP9.38□□□□□ -0.91
RPE-209ENST00000438191 RCBTB1Q8NDN9 531 aa9.38□□□□□ -0.91
RPE-209ENST00000438191 CHDHQ8NE62 594 aaPredicted RBP9.38□□□□□ -0.91
RPE-209ENST00000438191 ZMIZ2Q8NF64 920 aa9.38□□□□□ -0.91
RPE-209ENST00000438191 ARSGQ96EG1 525 aa9.38□□□□□ -0.91
RPE-209ENST00000438191 LMLNQ96KR4 655 aa9.38□□□□□ -0.91
RPE-209ENST00000438191 CGRRF1Q99675 332 aa9.38□□□□□ -0.91
RPE-209ENST00000438191 TIPINQ9BVW5 301 aa9.38□□□□□ -0.91
RPE-209ENST00000438191 FBXO44Q9H4M3 255 aa9.38□□□□□ -0.91
RPE-209ENST00000438191 MCCC2Q9HCC0 563 aa9.38□□□□□ -0.91
RPE-209ENST00000438191 IPO11Q9UI26 975 aaKnown RBP9.38□□□□□ -0.91
RPE-209ENST00000438191 RCAN3Q9UKA8 241 aa9.38□□□□□ -0.91
RPE-209ENST00000438191 INTS6Q9UL03 887 aaKnown RBP9.38□□□□□ -0.91
RPE-209ENST00000438191 PNMA8BQ9ULN7 279 aaPredicted RBP9.38□□□□□ -0.91
RPE-209ENST00000438191 A0A1W2PQH9 124 aa9.37□□□□□ -0.91
RPE-209ENST00000438191 A6NCN8 305 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms