RNA–Protein interactions for RNA: ENST00000431473.3

RIMKLA-202, Transcript of ribosomal modification protein rimK like family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIMKLA, Length 8,909 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIMKLA-202ENST00000431473 MCUBQ9NWR8 336 aa11.9□□□□□ -0.5
RIMKLA-202ENST00000431473 MBD2Q9UBB5 411 aa11.9□□□□□ -0.5
RIMKLA-202ENST00000431473 PCDHGA4Q9Y5G9 962 aa11.9□□□□□ -0.5
RIMKLA-202ENST00000431473 BCLAF3A2AJT9 711 aaKnown RBP11.9□□□□□ -0.51
RIMKLA-202ENST00000431473 CKBP12277 381 aa11.9□□□□□ -0.51
RIMKLA-202ENST00000431473 RXRGP48443 463 aa11.9□□□□□ -0.51
RIMKLA-202ENST00000431473 ATAD3BQ5T9A4 648 aa11.9□□□□□ -0.51
RIMKLA-202ENST00000431473 KLHL28Q9NXS3 571 aa11.9□□□□□ -0.51
RIMKLA-202ENST00000431473 PLA2G4CQ9UP65 541 aa11.9□□□□□ -0.51
RIMKLA-202ENST00000431473 PSMD12O00232 456 aaPredicted RBP11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 HLA-DQA2P01906 255 aa11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 SERPINF2P08697 491 aa11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 UMPSP11172 480 aa11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 ACAT1P24752 427 aaKnown RBP11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 MIPP30301 263 aa11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 GRIA4P48058 902 aa11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 FBXO47Q5MNV8 452 aa11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 BROXQ5VW32 411 aa11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 GCNT7Q6ZNI0 430 aa11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 ARHGAP36Q6ZRI8 547 aa11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 RNASE11Q8TAA1 199 aaKnown RBP11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 FAM151AQ8WW52 585 aa11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 TLR8Q9NR97 1041 aaKnown RBP11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 CDK7P50613 346 aa11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 ZNF157P51786 506 aaPredicted RBP11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 PRKAA2P54646 552 aa11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 CTXN3Q4LDR2 81 aa11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 SLC45A4Q5BKX6 768 aa11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 DHDDSQ86SQ9 333 aa11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 HIPK1Q86Z02 1210 aa11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 POC5Q8NA72 575 aa11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 PDE2AO00408 941 aaPredicted RBP11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 NUDT14O95848 222 aa11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 PSMB4P28070 264 aa11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 FNBP1LQ5T0N5 605 aa11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 RNF43Q68DV7 783 aa11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 DET1Q7L5Y6 550 aa11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 ULK2Q8IYT8 1036 aa11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 MOSPD2Q8NHP6 518 aa11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 REXO5Q96IC2 774 aaKnown RBP11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 BBS4Q96RK4 519 aa11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 GANQ9H2C0 597 aa11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 HACL1Q9UJ83 578 aa11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 H7C4K7 107 aa11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 ATP5BP06576 529 aaKnown RBP11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 TSPAN8P19075 237 aa11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 LY6KQ17RY6 165 aa11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 SLC25A24Q6NUK1 477 aa11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 ZNF540Q8NDQ6 660 aa11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 SLC25A23Q9BV35 468 aa11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 FBXO6Q9NRD1 293 aaPredicted RBP11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 DSEQ9UL01 958 aa11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 F8VP50 259 aa11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 GPR182O15218 404 aa11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 NTSR2O95665 410 aa11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 RBL1P28749 1068 aa11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 INO80DQ53TQ3 878 aaPredicted RBP11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 CCDC157Q569K6 752 aa11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 MARK2Q7KZI7 788 aaKnown RBP11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 SAMD7Q7Z3H4 446 aa11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 SPATA20Q8TB22 786 aa11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 PIWIL2Q8TC59 973 aaKnown RBP11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 PGM2Q96G03 612 aa11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 RIMS1Q86UR5 1692 aaKnown RBP11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 MAP2K7O14733 419 aa11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 ERCC2P18074 760 aa11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 NELFEP18615 380 aaKnown RBP11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 CCNA2P20248 432 aa11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 TNFRSF8P28908 595 aa11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 NTRK3Q16288 839 aa11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 MZT2BQ6NZ67 158 aa11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 USP7Q93009 1102 aa11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 SLITRK2Q9H156 845 aa11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 ETNK2Q9NVF9 386 aa11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 TP73O15350 636 aa11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 SNX3O60493 162 aa11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 RAMP2O60895 175 aa11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 MSX2P35548 267 aaPredicted RBP11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 PURAQ00577 322 aaKnown RBP11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 ST3GAL1Q11201 340 aa11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 MTSS1LQ765P7 747 aa11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 RNF44Q7L0R7 432 aa11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 SPATA6LQ8N4H0 392 aa11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 HPS1Q92902 700 aa11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 ZFP14Q9HCL3 533 aa11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 UBA2Q9UBT2 640 aaPredicted RBP11.89□□□□□ -0.51
RIMKLA-202ENST00000431473 A8MUI8 341 aa11.88□□□□□ -0.51
RIMKLA-202ENST00000431473 COX4I1P13073 169 aa11.88□□□□□ -0.51
RIMKLA-202ENST00000431473 CDH3P22223 829 aa11.88□□□□□ -0.51
RIMKLA-202ENST00000431473 LGALS3BPQ08380 585 aa11.88□□□□□ -0.51
RIMKLA-202ENST00000431473 LPIN1Q14693 890 aa11.88□□□□□ -0.51
RIMKLA-202ENST00000431473 SLC30A10Q6XR72 485 aa11.88□□□□□ -0.51
RIMKLA-202ENST00000431473 PCDH8O95206 1070 aa11.88□□□□□ -0.51
RIMKLA-202ENST00000431473 COX7A2P14406 83 aa11.88□□□□□ -0.51
RIMKLA-202ENST00000431473 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.88□□□□□ -0.51
RIMKLA-202ENST00000431473 CD302Q8IX05 232 aa11.88□□□□□ -0.51
RIMKLA-202ENST00000431473 LRRN4Q8WUT4 740 aa11.88□□□□□ -0.51
RIMKLA-202ENST00000431473 OSMRQ99650 979 aa11.88□□□□□ -0.51
RIMKLA-202ENST00000431473 FDXACB1Q9BRP7 624 aaPredicted RBP11.88□□□□□ -0.51
RIMKLA-202ENST00000431473 CIPCQ9C0C6 399 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms