RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 DLG2Q15700 870 aa10.06□□□□□ -0.8
HDAC6-207ENST00000430858 DCAF12L1Q5VU92 463 aa10.06□□□□□ -0.8
HDAC6-207ENST00000430858 HGSNATQ68CP4 663 aa10.06□□□□□ -0.8
HDAC6-207ENST00000430858 RWDD4Q6NW29 188 aaKnown RBP10.06□□□□□ -0.8
HDAC6-207ENST00000430858 SCYL2Q6P3W7 929 aa10.06□□□□□ -0.8
HDAC6-207ENST00000430858 TMC6Q7Z403 805 aa10.06□□□□□ -0.8
HDAC6-207ENST00000430858 DSG4Q86SJ6 1040 aa10.06□□□□□ -0.8
HDAC6-207ENST00000430858 MMAAQ8IVH4 418 aaKnown RBP10.06□□□□□ -0.8
HDAC6-207ENST00000430858 STK40Q8N2I9 435 aa10.06□□□□□ -0.8
HDAC6-207ENST00000430858 SH2D3CQ8N5H7 860 aa10.06□□□□□ -0.8
HDAC6-207ENST00000430858 ATP11CQ8NB49 1132 aa10.06□□□□□ -0.8
HDAC6-207ENST00000430858 GANCQ8TET4 914 aa10.06□□□□□ -0.8
HDAC6-207ENST00000430858 FNIP1Q8TF40 1166 aa10.06□□□□□ -0.8
HDAC6-207ENST00000430858 CPLX3Q8WVH0 158 aa10.06□□□□□ -0.8
HDAC6-207ENST00000430858 OR8D1Q8WZ84 308 aa10.06□□□□□ -0.8
HDAC6-207ENST00000430858 TBC1D31Q96DN5 1066 aa10.06□□□□□ -0.8
HDAC6-207ENST00000430858 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.06□□□□□ -0.8
HDAC6-207ENST00000430858 XPO4Q9C0E2 1151 aaKnown RBP10.06□□□□□ -0.8
HDAC6-207ENST00000430858 ISCUQ9H1K1 167 aa10.06□□□□□ -0.8
HDAC6-207ENST00000430858 MRPL47Q9HD33 250 aaKnown RBP10.06□□□□□ -0.8
HDAC6-207ENST00000430858 TMEM248Q9NWD8 314 aa10.06□□□□□ -0.8
HDAC6-207ENST00000430858 FBXL12Q9NXK8 326 aa10.06□□□□□ -0.8
HDAC6-207ENST00000430858 CNOT8Q9UFF9 292 aaKnown RBP10.06□□□□□ -0.8
HDAC6-207ENST00000430858 VPS51Q9UID3 782 aa10.06□□□□□ -0.8
HDAC6-207ENST00000430858 FARP1Q9Y4F1 1045 aaPredicted RBP10.06□□□□□ -0.8
HDAC6-207ENST00000430858 SCINQ9Y6U3 715 aa10.06□□□□□ -0.8
HDAC6-207ENST00000430858 CXorf51AA0A1B0GTR3 108 aa10.05□□□□□ -0.8
HDAC6-207ENST00000430858 A0A1W2PP55 124 aa10.05□□□□□ -0.8
HDAC6-207ENST00000430858 TMEM191CA6NGB0 347 aa10.05□□□□□ -0.8
HDAC6-207ENST00000430858 FAM72CH0Y354 149 aa10.05□□□□□ -0.8
HDAC6-207ENST00000430858 CBX4O00257 560 aa10.05□□□□□ -0.8
HDAC6-207ENST00000430858 MCF2LO15068 1137 aa10.05□□□□□ -0.8
HDAC6-207ENST00000430858 MID1O15344 667 aa10.05□□□□□ -0.8
HDAC6-207ENST00000430858 ATMINO43313 823 aaPredicted RBP10.05□□□□□ -0.8
HDAC6-207ENST00000430858 SEMA4FO95754 770 aa10.05□□□□□ -0.8
HDAC6-207ENST00000430858 IL1BP01584 269 aa10.05□□□□□ -0.8
HDAC6-207ENST00000430858 SYPP08247 313 aa10.05□□□□□ -0.8
HDAC6-207ENST00000430858 SRCP12931 536 aa10.05□□□□□ -0.8
HDAC6-207ENST00000430858 VAV1P15498 845 aa10.05□□□□□ -0.8
HDAC6-207ENST00000430858 ENGP17813 658 aa10.05□□□□□ -0.8
HDAC6-207ENST00000430858 OGDHQ02218 1023 aa10.05□□□□□ -0.8
HDAC6-207ENST00000430858 GFPT1Q06210 699 aaPredicted RBP10.05□□□□□ -0.8
HDAC6-207ENST00000430858 TRIM14Q14142 442 aa10.05□□□□□ -0.8
HDAC6-207ENST00000430858 NFKBIBQ15653 356 aa10.05□□□□□ -0.8
HDAC6-207ENST00000430858 FAM72AQ5TYM5 149 aa10.05□□□□□ -0.8
HDAC6-207ENST00000430858 FAM46CQ5VWP2 391 aa10.05□□□□□ -0.8
HDAC6-207ENST00000430858 DAB2IPQ5VWQ8 1189 aa10.05□□□□□ -0.8
HDAC6-207ENST00000430858 FAM72DQ6L9T8 149 aa10.05□□□□□ -0.8
HDAC6-207ENST00000430858 RETSATQ6NUM9 610 aa10.05□□□□□ -0.8
HDAC6-207ENST00000430858 NLRP14Q86W24 1093 aa10.05□□□□□ -0.8
HDAC6-207ENST00000430858 FAM72BQ86X60 149 aa10.05□□□□□ -0.8
HDAC6-207ENST00000430858 DRC7Q8IY82 874 aa10.05□□□□□ -0.8
HDAC6-207ENST00000430858 OR7D4Q8NG98 312 aa10.05□□□□□ -0.8
HDAC6-207ENST00000430858 ZNF653Q96CK0 615 aa10.05□□□□□ -0.8
HDAC6-207ENST00000430858 CCDC114Q96M63 670 aa10.05□□□□□ -0.8
HDAC6-207ENST00000430858 EPAS1Q99814 870 aa10.05□□□□□ -0.8
HDAC6-207ENST00000430858 OMDQ99983 421 aa10.05□□□□□ -0.8
HDAC6-207ENST00000430858 NCAPGQ9BPX3 1015 aa10.05□□□□□ -0.8
HDAC6-207ENST00000430858 SPON2Q9BUD6 331 aa10.05□□□□□ -0.8
HDAC6-207ENST00000430858 NEUROG2Q9H2A3 272 aa10.05□□□□□ -0.8
HDAC6-207ENST00000430858 CAPN10Q9HC96 672 aa10.05□□□□□ -0.8
HDAC6-207ENST00000430858 ATP13A1Q9HD20 1204 aa10.05□□□□□ -0.8
HDAC6-207ENST00000430858 TMEM9BQ9NQ34 198 aa10.05□□□□□ -0.8
HDAC6-207ENST00000430858 ADAMTS1Q9UHI8 967 aa10.05□□□□□ -0.8
HDAC6-207ENST00000430858 FZD4Q9ULV1 537 aa10.05□□□□□ -0.8
HDAC6-207ENST00000430858 FZD10Q9ULW2 581 aa10.05□□□□□ -0.8
HDAC6-207ENST00000430858 NEU3Q9UQ49 428 aa10.05□□□□□ -0.8
HDAC6-207ENST00000430858 RALGAPA1Q6GYQ0 2036 aa10.04□□□□□ -0.8
HDAC6-207ENST00000430858 A0A1B0GTW7 788 aa10.04□□□□□ -0.8
HDAC6-207ENST00000430858 DCDC2BA2VCK2 349 aa10.04□□□□□ -0.8
HDAC6-207ENST00000430858 C4orf47A7E2U8 309 aa10.04□□□□□ -0.8
HDAC6-207ENST00000430858 EIF3CLB5ME19 914 aaKnown RBP10.04□□□□□ -0.8
HDAC6-207ENST00000430858 C1QTNF3-AMACRE9PGA6 284 aa10.04□□□□□ -0.8
HDAC6-207ENST00000430858 CDX4O14627 284 aaPredicted RBP10.04□□□□□ -0.8
HDAC6-207ENST00000430858 TM4SF5O14894 197 aa10.04□□□□□ -0.8
HDAC6-207ENST00000430858 RAMP2O60895 175 aa10.04□□□□□ -0.8
HDAC6-207ENST00000430858 RNASEH2AO75792 299 aaKnown RBP10.04□□□□□ -0.8
HDAC6-207ENST00000430858 ZMPSTE24O75844 475 aa10.04□□□□□ -0.8
HDAC6-207ENST00000430858 RNF8O76064 485 aa10.04□□□□□ -0.8
HDAC6-207ENST00000430858 MT-CO1P00395 513 aa10.04□□□□□ -0.8
HDAC6-207ENST00000430858 GOT1P17174 413 aa10.04□□□□□ -0.8
HDAC6-207ENST00000430858 MAOBP27338 520 aa10.04□□□□□ -0.8
HDAC6-207ENST00000430858 EPHB2P29323 1055 aa10.04□□□□□ -0.8
HDAC6-207ENST00000430858 CASP14P31944 242 aa10.04□□□□□ -0.8
HDAC6-207ENST00000430858 HTR7P34969 479 aa10.04□□□□□ -0.8
HDAC6-207ENST00000430858 PSMD8P48556 350 aa10.04□□□□□ -0.8
HDAC6-207ENST00000430858 ATXN3P54252 364 aaPredicted RBP10.04□□□□□ -0.8
HDAC6-207ENST00000430858 ACAP1Q15027 740 aa10.04□□□□□ -0.8
HDAC6-207ENST00000430858 SPECC1LQ69YQ0 1117 aa10.04□□□□□ -0.8
HDAC6-207ENST00000430858 LINGO4Q6UY18 593 aa10.04□□□□□ -0.8
HDAC6-207ENST00000430858 Q6ZVU0 165 aa10.04□□□□□ -0.8
HDAC6-207ENST00000430858 DNAAF5Q86Y56 855 aa10.04□□□□□ -0.8
HDAC6-207ENST00000430858 PYROXD2Q8N2H3 581 aa10.04□□□□□ -0.8
HDAC6-207ENST00000430858 HDDC3Q8N4P3 179 aa10.04□□□□□ -0.8
HDAC6-207ENST00000430858 RTL3Q8N8U3 475 aaKnown RBP10.04□□□□□ -0.8
HDAC6-207ENST00000430858 ARHGEF2Q92974 986 aaKnown RBP10.04□□□□□ -0.8
HDAC6-207ENST00000430858 EIF3CQ99613 913 aaKnown RBP10.04□□□□□ -0.8
HDAC6-207ENST00000430858 ACE2Q9BYF1 805 aaPredicted RBP10.04□□□□□ -0.8
HDAC6-207ENST00000430858 MAGEB5Q9BZ81 275 aa10.04□□□□□ -0.8
HDAC6-207ENST00000430858 CEP44Q9C0F1 390 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms