RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 SETD3Q86TU7 594 aaPredicted RBP15.24■□□□□ 0.03
RTN4-210ENST00000427710 NLRP14Q86W24 1093 aa15.24■□□□□ 0.03
RTN4-210ENST00000427710 SYT12Q8IV01 421 aa15.24■□□□□ 0.03
RTN4-210ENST00000427710 SH2D3CQ8N5H7 860 aa15.24■□□□□ 0.03
RTN4-210ENST00000427710 KDM1BQ8NB78 822 aa15.24■□□□□ 0.03
RTN4-210ENST00000427710 SYN2Q92777 582 aaPredicted RBP15.24■□□□□ 0.03
RTN4-210ENST00000427710 NTAN1Q96AB6 310 aa15.24■□□□□ 0.03
RTN4-210ENST00000427710 TBC1D31Q96DN5 1066 aa15.24■□□□□ 0.03
RTN4-210ENST00000427710 ZNF419Q96HQ0 510 aaPredicted RBP15.24■□□□□ 0.03
RTN4-210ENST00000427710 BTBD6Q96KE9 485 aa15.24■□□□□ 0.03
RTN4-210ENST00000427710 PEBP4Q96S96 227 aa15.24■□□□□ 0.03
RTN4-210ENST00000427710 ISCUQ9H1K1 167 aa15.24■□□□□ 0.03
RTN4-210ENST00000427710 PABPC3Q9H361 631 aaKnown RBP15.24■□□□□ 0.03
RTN4-210ENST00000427710 C6orf106Q9H6K1 298 aaPredicted RBP15.24■□□□□ 0.03
RTN4-210ENST00000427710 FBRSQ9HAH7 460 aa15.24■□□□□ 0.03
RTN4-210ENST00000427710 TMEM51Q9NW97 253 aa15.24■□□□□ 0.03
RTN4-210ENST00000427710 FBXL12Q9NXK8 326 aa15.24■□□□□ 0.03
RTN4-210ENST00000427710 ARHGAP20Q9P2F6 1191 aa15.24■□□□□ 0.03
RTN4-210ENST00000427710 PCSK1NQ9UHG2 260 aa15.24■□□□□ 0.03
RTN4-210ENST00000427710 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.24■□□□□ 0.037e-14■■□□□ 11.4
RTN4-210ENST00000427710 A0A087X0T9 212 aa15.23■□□□□ 0.03
RTN4-210ENST00000427710 LNP1A1A4G5 178 aa15.23■□□□□ 0.03
RTN4-210ENST00000427710 TMEM191CA6NGB0 347 aa15.23■□□□□ 0.03
RTN4-210ENST00000427710 MEI4A8MW99 385 aa15.23■□□□□ 0.03
RTN4-210ENST00000427710 CBX4O00257 560 aa15.23■□□□□ 0.03
RTN4-210ENST00000427710 ATP9BO43861 1147 aa15.23■□□□□ 0.03
RTN4-210ENST00000427710 RNASEH1O60930 286 aaKnown RBP15.23■□□□□ 0.03
RTN4-210ENST00000427710 IGLV3-19P01714 112 aa15.23■□□□□ 0.03
RTN4-210ENST00000427710 CFIP05156 583 aa15.23■□□□□ 0.03
RTN4-210ENST00000427710 TPM3P06753 285 aa15.23■□□□□ 0.03
RTN4-210ENST00000427710 FAM228BP0C875 321 aa15.23■□□□□ 0.03
RTN4-210ENST00000427710 SLC8A1P32418 973 aa15.23■□□□□ 0.03
RTN4-210ENST00000427710 EIF4A3P38919 411 aaKnown RBP15.23■□□□□ 0.03
RTN4-210ENST00000427710 KRT83P78385 493 aa15.23■□□□□ 0.03
RTN4-210ENST00000427710 NRG1Q02297 640 aaPredicted RBP15.23■□□□□ 0.03
RTN4-210ENST00000427710 GNA12Q03113 381 aa15.23■□□□□ 0.03
RTN4-210ENST00000427710 ARID5BQ14865 1188 aa15.23■□□□□ 0.03
RTN4-210ENST00000427710 CA9Q16790 459 aa15.23■□□□□ 0.03
RTN4-210ENST00000427710 EFHC2Q5JST6 749 aa15.23■□□□□ 0.03
RTN4-210ENST00000427710 SPDYCQ5MJ68 293 aa15.23■□□□□ 0.03
RTN4-210ENST00000427710 PPP1R2P3Q6NXS1 205 aa15.23■□□□□ 0.03
RTN4-210ENST00000427710 LEKR1Q6ZMV7 388 aa15.23■□□□□ 0.03
RTN4-210ENST00000427710 ATP11CQ8NB49 1132 aa15.23■□□□□ 0.03
RTN4-210ENST00000427710 SNX19Q92543 992 aa15.23■□□□□ 0.03
RTN4-210ENST00000427710 ARHGEF26Q96DR7 871 aa15.23■□□□□ 0.03
RTN4-210ENST00000427710 PPP1R9BQ96SB3 815 aa15.23■□□□□ 0.03
RTN4-210ENST00000427710 EDEM2Q9BV94 578 aa15.23■□□□□ 0.03
RTN4-210ENST00000427710 THAP2Q9H0W7 228 aa15.23■□□□□ 0.03
RTN4-210ENST00000427710 MIR1-1HGQ9H1L0 117 aa15.23■□□□□ 0.03
RTN4-210ENST00000427710 TNKS2Q9H2K2 1166 aa15.23■□□□□ 0.03
RTN4-210ENST00000427710 ATP13A1Q9HD20 1204 aa15.23■□□□□ 0.03
RTN4-210ENST00000427710 DLL3Q9NYJ7 618 aa15.23■□□□□ 0.03
RTN4-210ENST00000427710 SARDHQ9UL12 918 aa15.23■□□□□ 0.03
RTN4-210ENST00000427710 SLCO1B1Q9Y6L6 691 aa15.23■□□□□ 0.03
RTN4-210ENST00000427710 TDRD6O60522 2096 aaKnown RBP15.23■□□□□ 0.03
RTN4-210ENST00000427710 ILVBLA1L0T0 632 aa15.22■□□□□ 0.03
RTN4-210ENST00000427710 FAM47DPA6NHR8 397 aa15.22■□□□□ 0.03
RTN4-210ENST00000427710 RNF103O00237 685 aa15.22■□□□□ 0.03
RTN4-210ENST00000427710 ZMPSTE24O75844 475 aa15.22■□□□□ 0.03
RTN4-210ENST00000427710 IL1BP01584 269 aa15.22■□□□□ 0.03
RTN4-210ENST00000427710 RHOQP17081 205 aa15.22■□□□□ 0.03
RTN4-210ENST00000427710 ARF5P84085 180 aa15.22■□□□□ 0.03
RTN4-210ENST00000427710 SCAPQ12770 1279 aa15.22■□□□□ 0.03
RTN4-210ENST00000427710 PUM1Q14671 1186 aaKnown RBP eCLIP15.22■□□□□ 0.033e-8■□□□□ 8.3
RTN4-210ENST00000427710 TTC31Q49AM3 519 aaPredicted RBP15.22■□□□□ 0.03
RTN4-210ENST00000427710 CCDC122Q5T0U0 273 aa15.22■□□□□ 0.03
RTN4-210ENST00000427710 ACBD5Q5T8D3 534 aaPredicted RBP15.22■□□□□ 0.03
RTN4-210ENST00000427710 STPG1Q5TH74 334 aa15.22■□□□□ 0.03
RTN4-210ENST00000427710 SPECC1LQ69YQ0 1117 aa15.22■□□□□ 0.03
RTN4-210ENST00000427710 IL31Q6EBC2 164 aa15.22■□□□□ 0.03
RTN4-210ENST00000427710 VSTM4Q8IW00 320 aa15.22■□□□□ 0.03
RTN4-210ENST00000427710 HDDC3Q8N4P3 179 aa15.22■□□□□ 0.03
RTN4-210ENST00000427710 AADATQ8N5Z0 425 aa15.22■□□□□ 0.03
RTN4-210ENST00000427710 DCAF4L2Q8NA75 395 aa15.22■□□□□ 0.03
RTN4-210ENST00000427710 NETO2Q8NC67 525 aa15.22■□□□□ 0.03
RTN4-210ENST00000427710 OR2I1PQ8NGU4 316 aa15.22■□□□□ 0.03
RTN4-210ENST00000427710 NETO1Q8TDF5 533 aa15.22■□□□□ 0.03
RTN4-210ENST00000427710 C2orf49Q9BVC5 232 aaPredicted RBP15.22■□□□□ 0.03
RTN4-210ENST00000427710 BTBD1Q9H0C5 482 aa15.22■□□□□ 0.03
RTN4-210ENST00000427710 NEUROG2Q9H2A3 272 aa15.22■□□□□ 0.03
RTN4-210ENST00000427710 TMEM248Q9NWD8 314 aa15.22■□□□□ 0.03
RTN4-210ENST00000427710 BZW2Q9Y6E2 419 aaKnown RBP15.22■□□□□ 0.03
RTN4-210ENST00000427710 C4orf47A7E2U8 309 aa15.21■□□□□ 0.03
RTN4-210ENST00000427710 METTL12A8MUP2 240 aa15.21■□□□□ 0.03
RTN4-210ENST00000427710 SLC30A4O14863 429 aa15.21■□□□□ 0.03
RTN4-210ENST00000427710 RNASEH2AO75792 299 aaKnown RBP15.21■□□□□ 0.03
RTN4-210ENST00000427710 FSBPO95073 299 aa15.21■□□□□ 0.03
RTN4-210ENST00000427710 SEMA4FO95754 770 aa15.21■□□□□ 0.03
RTN4-210ENST00000427710 C7P10643 843 aa15.21■□□□□ 0.03
RTN4-210ENST00000427710 TCF4P15884 667 aa15.21■□□□□ 0.03
RTN4-210ENST00000427710 KCNA4P22459 653 aa15.21■□□□□ 0.03
RTN4-210ENST00000427710 EPHB2P29323 1055 aa15.21■□□□□ 0.03
RTN4-210ENST00000427710 MIPP30301 263 aa15.21■□□□□ 0.03
RTN4-210ENST00000427710 L1CAMP32004 1257 aa15.21■□□□□ 0.03
RTN4-210ENST00000427710 MAPK8P45983 427 aa15.21■□□□□ 0.03
RTN4-210ENST00000427710 ADKP55263 362 aaKnown RBP15.21■□□□□ 0.03
RTN4-210ENST00000427710 ZBTB16Q05516 673 aa15.21■□□□□ 0.03
RTN4-210ENST00000427710 DUOXA1Q1HG43 343 aa15.21■□□□□ 0.03
RTN4-210ENST00000427710 PEAR1Q5VY43 1037 aaPredicted RBP15.21■□□□□ 0.03
RTN4-210ENST00000427710 DGLUCYQ7Z3D6 616 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms