RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 TBC1D3LB9A6J9 549 aa10.32□□□□□ -0.76
GACAT3-201ENST00000426539 K7ERQ8 282 aa10.32□□□□□ -0.76
GACAT3-201ENST00000426539 M0QYT0 321 aa10.32□□□□□ -0.76
GACAT3-201ENST00000426539 TLR4O00206 839 aa10.32□□□□□ -0.76
GACAT3-201ENST00000426539 MCF2LO15068 1137 aa10.32□□□□□ -0.76
GACAT3-201ENST00000426539 SLC7A4O43246 635 aa10.32□□□□□ -0.76
GACAT3-201ENST00000426539 SNAP91O60641 907 aa10.32□□□□□ -0.76
GACAT3-201ENST00000426539 ADCY5O95622 1261 aa10.32□□□□□ -0.76
GACAT3-201ENST00000426539 MT-CO1P00395 513 aa10.32□□□□□ -0.76
GACAT3-201ENST00000426539 ITGAVP06756 1048 aa10.32□□□□□ -0.76
GACAT3-201ENST00000426539 CTSLP07711 333 aa10.32□□□□□ -0.76
GACAT3-201ENST00000426539 TBC1D3HP0C7X1 549 aa10.32□□□□□ -0.76
GACAT3-201ENST00000426539 EPHA8P29322 1005 aaPredicted RBP10.32□□□□□ -0.76
GACAT3-201ENST00000426539 MAT2AP31153 395 aaKnown RBP10.32□□□□□ -0.76
GACAT3-201ENST00000426539 NOS2P35228 1153 aa10.32□□□□□ -0.76
GACAT3-201ENST00000426539 NNMTP40261 264 aa10.32□□□□□ -0.76
GACAT3-201ENST00000426539 RXRGP48443 463 aa10.32□□□□□ -0.76
GACAT3-201ENST00000426539 CXCR3P49682 368 aa10.32□□□□□ -0.76
GACAT3-201ENST00000426539 OXCT1P55809 520 aa10.32□□□□□ -0.76
GACAT3-201ENST00000426539 TAS2R38P59533 333 aa10.32□□□□□ -0.76
GACAT3-201ENST00000426539 PTK2Q05397 1052 aa10.32□□□□□ -0.76
GACAT3-201ENST00000426539 CYP4F3Q08477 520 aa10.32□□□□□ -0.76
GACAT3-201ENST00000426539 CNTN1Q12860 1018 aa10.32□□□□□ -0.76
GACAT3-201ENST00000426539 BNIP3Q12983 259 aa10.32□□□□□ -0.76
GACAT3-201ENST00000426539 DNAJC3Q13217 504 aa10.32□□□□□ -0.76
GACAT3-201ENST00000426539 ZNF177Q13360 481 aaPredicted RBP10.32□□□□□ -0.76
GACAT3-201ENST00000426539 COL9A2Q14055 689 aaPredicted RBP10.32□□□□□ -0.76
GACAT3-201ENST00000426539 DLG2Q15700 870 aa10.32□□□□□ -0.76
GACAT3-201ENST00000426539 COL28A1Q2UY09 1125 aa10.32□□□□□ -0.76
GACAT3-201ENST00000426539 POM121L1PQ3SYA9 428 aa10.32□□□□□ -0.76
GACAT3-201ENST00000426539 ALFQ53S48 1182 aa10.32□□□□□ -0.76
GACAT3-201ENST00000426539 MIIPQ5JXC2 388 aa10.32□□□□□ -0.76
GACAT3-201ENST00000426539 TBC1D3GQ6DHY5 549 aa10.32□□□□□ -0.76
GACAT3-201ENST00000426539 TBC1D3CQ6IPX1 549 aa10.32□□□□□ -0.76
GACAT3-201ENST00000426539 NAPEPLDQ6IQ20 393 aa10.32□□□□□ -0.76
GACAT3-201ENST00000426539 TRNP1Q6NT89 227 aa10.32□□□□□ -0.76
GACAT3-201ENST00000426539 Q6ZVU0 165 aa10.32□□□□□ -0.76
GACAT3-201ENST00000426539 FAM71AQ8IYT1 594 aa10.32□□□□□ -0.76
GACAT3-201ENST00000426539 TBC1D3Q8IZP1 549 aaPredicted RBP10.32□□□□□ -0.76
GACAT3-201ENST00000426539 GALNT15Q8N3T1 639 aa10.32□□□□□ -0.76
GACAT3-201ENST00000426539 SH2D3CQ8N5H7 860 aa10.32□□□□□ -0.76
GACAT3-201ENST00000426539 OR8D1Q8WZ84 308 aa10.32□□□□□ -0.76
GACAT3-201ENST00000426539 TSC1Q92574 1164 aa10.32□□□□□ -0.76
GACAT3-201ENST00000426539 NT5C3BQ969T7 300 aa10.32□□□□□ -0.76
GACAT3-201ENST00000426539 MARVELD3Q96A59 401 aa10.32□□□□□ -0.76
GACAT3-201ENST00000426539 CNDP2Q96KP4 475 aaKnown RBP10.32□□□□□ -0.76
GACAT3-201ENST00000426539 GDF3Q9NR23 364 aa10.32□□□□□ -0.76
GACAT3-201ENST00000426539 TMPRSS4Q9NRS4 437 aa10.32□□□□□ -0.76
GACAT3-201ENST00000426539 ARHGEF38Q9NXL2 777 aa10.32□□□□□ -0.76
GACAT3-201ENST00000426539 CA5BQ9Y2D0 317 aa10.32□□□□□ -0.76
GACAT3-201ENST00000426539 ENC1O14682 589 aa10.31□□□□□ -0.76
GACAT3-201ENST00000426539 CLDN11O75508 207 aa10.31□□□□□ -0.76
GACAT3-201ENST00000426539 LDOC1O95751 146 aaPredicted RBP10.31□□□□□ -0.76
GACAT3-201ENST00000426539 SRCP12931 536 aa10.31□□□□□ -0.76
GACAT3-201ENST00000426539 CDH5P33151 784 aaPredicted RBP10.31□□□□□ -0.76
GACAT3-201ENST00000426539 KRT9P35527 623 aa10.31□□□□□ -0.76
GACAT3-201ENST00000426539 MTIF2P46199 727 aaKnown RBP10.31□□□□□ -0.76
GACAT3-201ENST00000426539 ACADVLP49748 655 aa10.31□□□□□ -0.76
GACAT3-201ENST00000426539 CDH4P55283 916 aa10.31□□□□□ -0.76
GACAT3-201ENST00000426539 UBE2HP62256 183 aa10.31□□□□□ -0.76
GACAT3-201ENST00000426539 KCNMA1Q12791 1236 aa10.31□□□□□ -0.76
GACAT3-201ENST00000426539 MAN2A1Q16706 1144 aa10.31□□□□□ -0.76
GACAT3-201ENST00000426539 INAVAQ3KP66 663 aa10.31□□□□□ -0.76
GACAT3-201ENST00000426539 ACCSLQ4AC99 568 aa10.31□□□□□ -0.76
GACAT3-201ENST00000426539 SFMBT2Q5VUG0 894 aa10.31□□□□□ -0.76
GACAT3-201ENST00000426539 SMYD5Q6GMV2 418 aa10.31□□□□□ -0.76
GACAT3-201ENST00000426539 PDZD3Q86UT5 571 aa10.31□□□□□ -0.76
GACAT3-201ENST00000426539 TRIM69Q86WT6 500 aa10.31□□□□□ -0.76
GACAT3-201ENST00000426539 EID2Q8N6I1 236 aa10.31□□□□□ -0.76
GACAT3-201ENST00000426539 MFSD2AQ8NA29 543 aa10.31□□□□□ -0.76
GACAT3-201ENST00000426539 MLKLQ8NB16 471 aa10.31□□□□□ -0.76
GACAT3-201ENST00000426539 PIP4K2CQ8TBX8 421 aa10.31□□□□□ -0.76
GACAT3-201ENST00000426539 HNRNPLLQ8WVV9 542 aaKnown RBP10.31□□□□□ -0.76
GACAT3-201ENST00000426539 SKA1Q96BD8 255 aa10.31□□□□□ -0.76
GACAT3-201ENST00000426539 TKTL2Q9H0I9 626 aa10.31□□□□□ -0.76
GACAT3-201ENST00000426539 SIK2Q9H0K1 926 aa10.31□□□□□ -0.76
GACAT3-201ENST00000426539 KDM4CQ9H3R0 1056 aa10.31□□□□□ -0.76
GACAT3-201ENST00000426539 CAAP1Q9H8G2 361 aa10.31□□□□□ -0.76
GACAT3-201ENST00000426539 ERVMER34-1Q9H9K5 563 aa10.31□□□□□ -0.76
GACAT3-201ENST00000426539 VPS51Q9UID3 782 aa10.31□□□□□ -0.76
GACAT3-201ENST00000426539 SLC25A13Q9UJS0 675 aa10.31□□□□□ -0.76
GACAT3-201ENST00000426539 VPS28Q9UK41 221 aa10.31□□□□□ -0.76
GACAT3-201ENST00000426539 TPX2Q9ULW0 747 aaKnown RBP10.31□□□□□ -0.76
GACAT3-201ENST00000426539 HS3ST2Q9Y278 367 aa10.31□□□□□ -0.76
GACAT3-201ENST00000426539 PCDHGA1Q9Y5H4 931 aa10.31□□□□□ -0.76
GACAT3-201ENST00000426539 APC2O95996 2303 aa10.3□□□□□ -0.76
GACAT3-201ENST00000426539 A0A0D9SEW6 157 aa10.3□□□□□ -0.76
GACAT3-201ENST00000426539 DRGXA6NNA5 263 aa10.3□□□□□ -0.76
GACAT3-201ENST00000426539 ALOX15BO15296 676 aa10.3□□□□□ -0.76
GACAT3-201ENST00000426539 YKT6O15498 198 aa10.3□□□□□ -0.76
GACAT3-201ENST00000426539 SMAD6O43541 496 aaKnown RBP10.3□□□□□ -0.76
GACAT3-201ENST00000426539 CYP11B1P15538 503 aa10.3□□□□□ -0.76
GACAT3-201ENST00000426539 GABRB2P47870 512 aa10.3□□□□□ -0.76
GACAT3-201ENST00000426539 SULT1E1P49888 294 aa10.3□□□□□ -0.76
GACAT3-201ENST00000426539 RNASE9P60153 205 aaKnown RBP10.3□□□□□ -0.76
GACAT3-201ENST00000426539 MTA1Q13330 715 aa10.3□□□□□ -0.76
GACAT3-201ENST00000426539 DRAP1Q14919 205 aaPredicted RBP10.3□□□□□ -0.76
GACAT3-201ENST00000426539 DPCR1Q3MIW9 517 aa10.3□□□□□ -0.76
GACAT3-201ENST00000426539 VWA3BQ502W6 1294 aa10.3□□□□□ -0.76
GACAT3-201ENST00000426539 SOWAHCQ53LP3 525 aaPredicted RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms