RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 RABGAP1LQ5R372 815 aa15.07■□□□□ 0
PDAP1-202ENST00000426447 FOXR1Q6PIV2 292 aa15.07■□□□□ 0
PDAP1-202ENST00000426447 CCDC81Q6ZN84 652 aa15.07■□□□□ 0
PDAP1-202ENST00000426447 PRICKLE2Q7Z3G6 844 aa15.07■□□□□ 0
PDAP1-202ENST00000426447 CIR1Q86X95 450 aaPredicted RBP15.07■□□□□ 0
PDAP1-202ENST00000426447 SMYD4Q8IYR2 804 aaPredicted RBP15.07■□□□□ 0
PDAP1-202ENST00000426447 UBR7Q8N806 425 aa15.07■□□□□ 0
PDAP1-202ENST00000426447 TMEM145Q8NBT3 493 aa15.07■□□□□ 0
PDAP1-202ENST00000426447 OR13H1Q8NG92 308 aa15.07■□□□□ 0
PDAP1-202ENST00000426447 IFI44Q8TCB0 444 aa15.07■□□□□ 0
PDAP1-202ENST00000426447 TSG101Q99816 390 aa15.07■□□□□ 0
PDAP1-202ENST00000426447 DUSP23Q9BVJ7 150 aa15.07■□□□□ 0
PDAP1-202ENST00000426447 USP29Q9HBJ7 922 aa15.07■□□□□ 0
PDAP1-202ENST00000426447 FZD3Q9NPG1 666 aa15.07■□□□□ 0
PDAP1-202ENST00000426447 ASCL3Q9NQ33 180 aa15.07■□□□□ 0
PDAP1-202ENST00000426447 DYRK4Q9NR20 520 aa15.07■□□□□ 0
PDAP1-202ENST00000426447 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.07■□□□□ 0
PDAP1-202ENST00000426447 DNAJC28Q9NX36 388 aa15.07■□□□□ 0
PDAP1-202ENST00000426447 SATB2Q9UPW6 733 aa15.07■□□□□ 0
PDAP1-202ENST00000426447 HPSEQ9Y251 543 aa15.07■□□□□ 0
PDAP1-202ENST00000426447 CPED1A4D0V7 1026 aa15.06■□□□□ 0
PDAP1-202ENST00000426447 KCNU1A8MYU2 1149 aa15.06■□□□□ 0
PDAP1-202ENST00000426447 RNF225M0QZC1 329 aaPredicted RBP15.06■□□□□ 0
PDAP1-202ENST00000426447 KPNA3O00505 521 aaPredicted RBP15.06■□□□□ 0
PDAP1-202ENST00000426447 SCAMP1O15126 338 aa15.06■□□□□ 0
PDAP1-202ENST00000426447 ALOX15BO15296 676 aa15.06■□□□□ 0
PDAP1-202ENST00000426447 ATP9BO43861 1147 aa15.06■□□□□ 0
PDAP1-202ENST00000426447 PCDH8O95206 1070 aa15.06■□□□□ 0
PDAP1-202ENST00000426447 TRUB2O95900 331 aaKnown RBP15.06■□□□□ 0
PDAP1-202ENST00000426447 CALCAP01258 141 aa15.06■□□□□ 0
PDAP1-202ENST00000426447 GIMD1P0DJR0 217 aa15.06■□□□□ 0
PDAP1-202ENST00000426447 KRT10P13645 584 aa15.06■□□□□ 0
PDAP1-202ENST00000426447 HNRNPA2B1P22626 353 aaKnown RBP15.06■□□□□ 0
PDAP1-202ENST00000426447 NDUFA8P51970 172 aa15.06■□□□□ 0
PDAP1-202ENST00000426447 CLDN2P57739 230 aa15.06■□□□□ 0
PDAP1-202ENST00000426447 ISXQ2M1V0 245 aa15.06■□□□□ 0
PDAP1-202ENST00000426447 TTC39BQ5VTQ0 682 aaPredicted RBP15.06■□□□□ 0
PDAP1-202ENST00000426447 KIAA1614Q5VZ46 1190 aa15.06■□□□□ 0
PDAP1-202ENST00000426447 NEK5Q6P3R8 708 aa15.06■□□□□ 0
PDAP1-202ENST00000426447 Q6ZVU0 165 aa15.06■□□□□ 0
PDAP1-202ENST00000426447 PPM1KQ8N3J5 372 aa15.06■□□□□ 0
PDAP1-202ENST00000426447 SNRNP27Q8WVK2 155 aaKnown RBP15.06■□□□□ 0
PDAP1-202ENST00000426447 SLC46A1Q96NT5 459 aa15.06■□□□□ 0
PDAP1-202ENST00000426447 NT5C1BQ96P26 610 aa15.06■□□□□ 0
PDAP1-202ENST00000426447 ZSWIM1Q9BR11 485 aa15.06■□□□□ 0
PDAP1-202ENST00000426447 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.06■□□□□ 0
PDAP1-202ENST00000426447 HEMK1Q9Y5R4 338 aaPredicted RBP15.06■□□□□ 0
PDAP1-202ENST00000426447 TENM4Q6N022 2769 aa15.05■□□□□ 0
PDAP1-202ENST00000426447 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.05■□□□□ -0
PDAP1-202ENST00000426447 TCAF2A6NFQ2 919 aa15.05■□□□□ -0
PDAP1-202ENST00000426447 K7ENP7 123 aa15.05■□□□□ -0
PDAP1-202ENST00000426447 K7ESM1 405 aa15.05■□□□□ -0
PDAP1-202ENST00000426447 SLC16A3O15427 465 aaKnown RBP15.05■□□□□ -0
PDAP1-202ENST00000426447 NEBLO76041 1014 aa15.05■□□□□ -0
PDAP1-202ENST00000426447 CENPBP07199 599 aaPredicted RBP15.05■□□□□ -0
PDAP1-202ENST00000426447 ACADSBP45954 432 aa15.05■□□□□ -0
PDAP1-202ENST00000426447 TAS2R38P59533 333 aa15.05■□□□□ -0
PDAP1-202ENST00000426447 HNRNPKP61978 463 aaKnown RBP eCLIP15.05■□□□□ -0
PDAP1-202ENST00000426447 FKBP3Q00688 224 aaKnown RBP15.05■□□□□ -0
PDAP1-202ENST00000426447 ZNF177Q13360 481 aaPredicted RBP15.05■□□□□ -0
PDAP1-202ENST00000426447 CDKN3Q16667 212 aa15.05■□□□□ -0
PDAP1-202ENST00000426447 INO80CQ6PI98 192 aaPredicted RBP15.05■□□□□ -0
PDAP1-202ENST00000426447 KRBA2Q6ZNG9 492 aa15.05■□□□□ -0
PDAP1-202ENST00000426447 Q6ZSR6 202 aa15.05■□□□□ -0
PDAP1-202ENST00000426447 HORMAD1Q86X24 394 aa15.05■□□□□ -0
PDAP1-202ENST00000426447 GRAMD1AQ96CP6 724 aa15.05■□□□□ -0
PDAP1-202ENST00000426447 IFT43Q96FT9 208 aa15.05■□□□□ -0
PDAP1-202ENST00000426447 ATXN7L3BQ96GX2 97 aa15.05■□□□□ -0
PDAP1-202ENST00000426447 SPATA32Q96LK8 384 aa15.05■□□□□ -0
PDAP1-202ENST00000426447 CCDC114Q96M63 670 aa15.05■□□□□ -0
PDAP1-202ENST00000426447 RPRD1AQ96P16 312 aaPredicted RBP15.05■□□□□ -0
PDAP1-202ENST00000426447 FEM1AQ9BSK4 669 aa15.05■□□□□ -0
PDAP1-202ENST00000426447 FAM117AQ9C073 453 aa15.05■□□□□ -0
PDAP1-202ENST00000426447 CAAP1Q9H8G2 361 aa15.05■□□□□ -0
PDAP1-202ENST00000426447 POPDC2Q9HBU9 364 aa15.05■□□□□ -0
PDAP1-202ENST00000426447 ARMCX3Q9UH62 379 aaPredicted RBP15.05■□□□□ -0
PDAP1-202ENST00000426447 IPO11Q9UI26 975 aaKnown RBP15.05■□□□□ -0
PDAP1-202ENST00000426447 VPS28Q9UK41 221 aa15.05■□□□□ -0
PDAP1-202ENST00000426447 SYNJ2BP-COX16A0A087WUM0 186 aa15.04■□□□□ -0
PDAP1-202ENST00000426447 SLC2A3P11169 496 aa15.04■□□□□ -0
PDAP1-202ENST00000426447 TGM2P21980 687 aa15.04■□□□□ -0
PDAP1-202ENST00000426447 VASPP50552 380 aaPredicted RBP15.04■□□□□ -0
PDAP1-202ENST00000426447 YWHAZP63104 245 aaKnown RBP15.04■□□□□ -0
PDAP1-202ENST00000426447 ZNF284Q2VY69 593 aa15.04■□□□□ -0
PDAP1-202ENST00000426447 ZSCAN23Q3MJ62 389 aa15.04■□□□□ -0
PDAP1-202ENST00000426447 PIP5KL1Q5T9C9 394 aa15.04■□□□□ -0
PDAP1-202ENST00000426447 BEND5Q7L4P6 421 aa15.04■□□□□ -0
PDAP1-202ENST00000426447 PTAR1Q7Z6K3 402 aaPredicted RBP15.04■□□□□ -0
PDAP1-202ENST00000426447 DCP2Q8IU60 420 aaKnown RBP15.04■□□□□ -0
PDAP1-202ENST00000426447 ARL14Q8N4G2 192 aa15.04■□□□□ -0
PDAP1-202ENST00000426447 SH2D3CQ8N5H7 860 aa15.04■□□□□ -0
PDAP1-202ENST00000426447 FAM174AQ8TBP5 190 aa15.04■□□□□ -0
PDAP1-202ENST00000426447 NOX5Q96PH1 765 aa15.04■□□□□ -0
PDAP1-202ENST00000426447 MED15Q96RN5 788 aa15.04■□□□□ -0
PDAP1-202ENST00000426447 NCKIPSDQ9NZQ3 722 aa15.04■□□□□ -0
PDAP1-202ENST00000426447 COX16Q9P0S2 106 aa15.04■□□□□ -0
PDAP1-202ENST00000426447 CFAP46Q8IYW2 2715 aa15.04■□□□□ -0
PDAP1-202ENST00000426447 LY6G6EA0A0G2JKS1 128 aa15.03■□□□□ -0
PDAP1-202ENST00000426447 A6NNZ2 444 aa15.03■□□□□ -0
PDAP1-202ENST00000426447 H3BM21 787 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms