RNA–Protein interactions for RNA: ENST00000424964.6

TMEM248-204, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-204ENST00000424964 CHD5Q8TDI0 1954 aa15.16■□□□□ 0.02
TMEM248-204ENST00000424964 CKAP5Q14008 2032 aa15.16■□□□□ 0.02
TMEM248-204ENST00000424964 RASA4BC9J798 803 aa15.16■□□□□ 0.02
TMEM248-204ENST00000424964 RASA4O43374 803 aa15.16■□□□□ 0.02
TMEM248-204ENST00000424964 CD48P09326 243 aa15.16■□□□□ 0.02
TMEM248-204ENST00000424964 GABRG2P18507 467 aa15.16■□□□□ 0.02
TMEM248-204ENST00000424964 CCZ1BP86790 482 aa15.16■□□□□ 0.02
TMEM248-204ENST00000424964 CCZ1P86791 482 aaPredicted RBP15.16■□□□□ 0.02
TMEM248-204ENST00000424964 MMRN1Q13201 1228 aa15.16■□□□□ 0.02
TMEM248-204ENST00000424964 DPYSQ14117 519 aa15.16■□□□□ 0.02
TMEM248-204ENST00000424964 PDK2Q15119 407 aa15.16■□□□□ 0.02
TMEM248-204ENST00000424964 IFI16Q16666 785 aaKnown RBP15.16■□□□□ 0.02
TMEM248-204ENST00000424964 RETSATQ6NUM9 610 aa15.16■□□□□ 0.02
TMEM248-204ENST00000424964 ZC3H14Q6PJT7 736 aaKnown RBP15.16■□□□□ 0.02
TMEM248-204ENST00000424964 WDR5BQ86VZ2 330 aa15.16■□□□□ 0.02
TMEM248-204ENST00000424964 RHOT1Q8IXI2 618 aa15.16■□□□□ 0.02
TMEM248-204ENST00000424964 UMODL1-AS1Q8N2C9 162 aa15.16■□□□□ 0.02
TMEM248-204ENST00000424964 MDGA1Q8NFP4 955 aa15.16■□□□□ 0.02
TMEM248-204ENST00000424964 NELL1Q92832 810 aa15.16■□□□□ 0.02
TMEM248-204ENST00000424964 HMCESQ96FZ2 354 aa15.16■□□□□ 0.02
TMEM248-204ENST00000424964 CELF6Q96J87 481 aaKnown RBP15.16■□□□□ 0.02
TMEM248-204ENST00000424964 ACE2Q9BYF1 805 aaPredicted RBP15.16■□□□□ 0.02
TMEM248-204ENST00000424964 TPSD1Q9BZJ3 242 aa15.16■□□□□ 0.02
TMEM248-204ENST00000424964 NOL6Q9H6R4 1146 aaKnown RBP15.16■□□□□ 0.02
TMEM248-204ENST00000424964 RCOR3Q9P2K3 495 aaPredicted RBP15.16■□□□□ 0.02
TMEM248-204ENST00000424964 TRIM10Q9UDY6 481 aa15.16■□□□□ 0.02
TMEM248-204ENST00000424964 EBF1Q9UH73 591 aa15.16■□□□□ 0.02
TMEM248-204ENST00000424964 PCDHGA2Q9Y5H1 932 aa15.16■□□□□ 0.02
TMEM248-204ENST00000424964 R4GN57 208 aa15.16■□□□□ 0.02
TMEM248-204ENST00000424964 CCDC163A0A0D9SF12 145 aa15.15■□□□□ 0.02
TMEM248-204ENST00000424964 A0A0U1RQJ8 604 aa15.15■□□□□ 0.02
TMEM248-204ENST00000424964 EDDM13A0A1B0GTR0 161 aa15.15■□□□□ 0.02
TMEM248-204ENST00000424964 MACROD2A1Z1Q3 448 aa15.15■□□□□ 0.02
TMEM248-204ENST00000424964 LRRD1A4D1F6 860 aa15.15■□□□□ 0.02
TMEM248-204ENST00000424964 KDELR3O43731 214 aa15.15■□□□□ 0.02
TMEM248-204ENST00000424964 SIN3BO75182 1162 aa15.15■□□□□ 0.02
TMEM248-204ENST00000424964 ZMPSTE24O75844 475 aa15.15■□□□□ 0.02
TMEM248-204ENST00000424964 MT-CO1P00395 513 aa15.15■□□□□ 0.02
TMEM248-204ENST00000424964 KDELR1P24390 212 aa15.15■□□□□ 0.02
TMEM248-204ENST00000424964 ARSEP51690 589 aa15.15■□□□□ 0.02
TMEM248-204ENST00000424964 NDST2P52849 883 aa15.15■□□□□ 0.02
TMEM248-204ENST00000424964 SLC20A2Q08357 652 aa15.15■□□□□ 0.02
TMEM248-204ENST00000424964 CAMK2GQ13555 558 aaPredicted RBP15.15■□□□□ 0.02
TMEM248-204ENST00000424964 DPYSL3Q14195 570 aa15.15■□□□□ 0.02
TMEM248-204ENST00000424964 DLG2Q15700 870 aa15.15■□□□□ 0.02
TMEM248-204ENST00000424964 HNRNPA1L2Q32P51 320 aaKnown RBP15.15■□□□□ 0.02
TMEM248-204ENST00000424964 PARP15Q460N3 678 aa15.15■□□□□ 0.02
TMEM248-204ENST00000424964 LRRC38Q5VT99 294 aa15.15■□□□□ 0.02
TMEM248-204ENST00000424964 C11orf63Q6NUN7 778 aa15.15■□□□□ 0.02
TMEM248-204ENST00000424964 TMCO3Q6UWJ1 677 aa15.15■□□□□ 0.02
TMEM248-204ENST00000424964 KIAA1324Q6UXG2 1013 aaKnown RBP15.15■□□□□ 0.02
TMEM248-204ENST00000424964 RASSF3Q86WH2 238 aa15.15■□□□□ 0.02
TMEM248-204ENST00000424964 TMPRSS6Q8IU80 811 aa15.15■□□□□ 0.02
TMEM248-204ENST00000424964 SH2D3CQ8N5H7 860 aa15.15■□□□□ 0.02
TMEM248-204ENST00000424964 FAM71BQ8TC56 605 aa15.15■□□□□ 0.02
TMEM248-204ENST00000424964 KIAA1524Q8TCG1 905 aa15.15■□□□□ 0.02
TMEM248-204ENST00000424964 RAPGEF5Q92565 580 aa15.15■□□□□ 0.02
TMEM248-204ENST00000424964 TSC1Q92574 1164 aa15.15■□□□□ 0.02
TMEM248-204ENST00000424964 SLC39A8Q9C0K1 460 aa15.15■□□□□ 0.02
TMEM248-204ENST00000424964 SLC6A17Q9H1V8 727 aa15.15■□□□□ 0.02
TMEM248-204ENST00000424964 PRDM16Q9HAZ2 1276 aa15.15■□□□□ 0.02
TMEM248-204ENST00000424964 CD248Q9HCU0 757 aa15.15■□□□□ 0.02
TMEM248-204ENST00000424964 PRSS16Q9NQE7 514 aa15.15■□□□□ 0.02
TMEM248-204ENST00000424964 DDX56Q9NY93 547 aaKnown RBP15.15■□□□□ 0.02
TMEM248-204ENST00000424964 HS3ST2Q9Y278 367 aa15.15■□□□□ 0.02
TMEM248-204ENST00000424964 MUC22E2RYF6 1773 aaPredicted RBP15.15■□□□□ 0.02
TMEM248-204ENST00000424964 CACNA1HO95180 2353 aa15.14■□□□□ 0.01
TMEM248-204ENST00000424964 TARSL2A2RTX5 802 aaKnown RBP15.14■□□□□ 0.01
TMEM248-204ENST00000424964 ARHGAP42A6NI28 874 aa15.14■□□□□ 0.01
TMEM248-204ENST00000424964 K7ERQ8 282 aa15.14■□□□□ 0.01
TMEM248-204ENST00000424964 DCLK1O15075 740 aa15.14■□□□□ 0.01
TMEM248-204ENST00000424964 ATP9BO43861 1147 aa15.14■□□□□ 0.01
TMEM248-204ENST00000424964 BNIP3LO60238 219 aa15.14■□□□□ 0.01
TMEM248-204ENST00000424964 KRT1P04264 644 aa15.14■□□□□ 0.01
TMEM248-204ENST00000424964 SRCP12931 536 aa15.14■□□□□ 0.01
TMEM248-204ENST00000424964 NDUFV2P19404 249 aa15.14■□□□□ 0.01
TMEM248-204ENST00000424964 IL4RP24394 825 aa15.14■□□□□ 0.01
TMEM248-204ENST00000424964 VASPP50552 380 aaPredicted RBP15.14■□□□□ 0.01
TMEM248-204ENST00000424964 GEMIN4P57678 1058 aaKnown RBP15.14■□□□□ 0.01
TMEM248-204ENST00000424964 ARF5P84085 180 aa15.14■□□□□ 0.01
TMEM248-204ENST00000424964 USP39Q53GS9 565 aaKnown RBP15.14■□□□□ 0.01
TMEM248-204ENST00000424964 C9orf64Q5T6V5 341 aa15.14■□□□□ 0.01
TMEM248-204ENST00000424964 LEKR1Q6ZMV7 388 aa15.14■□□□□ 0.01
TMEM248-204ENST00000424964 LZTR1Q8N653 840 aa15.14■□□□□ 0.01
TMEM248-204ENST00000424964 NETO2Q8NC67 525 aa15.14■□□□□ 0.01
TMEM248-204ENST00000424964 ZBTB44Q8NCP5 570 aa15.14■□□□□ 0.01
TMEM248-204ENST00000424964 OR2T3Q8NH03 318 aa15.14■□□□□ 0.01
TMEM248-204ENST00000424964 PRCCQ92733 491 aaPredicted RBP15.14■□□□□ 0.01
TMEM248-204ENST00000424964 MRGPRX1Q96LB2 322 aa15.14■□□□□ 0.01
TMEM248-204ENST00000424964 ZNF670Q9BS34 389 aa15.14■□□□□ 0.01
TMEM248-204ENST00000424964 TSGA10Q9BZW7 698 aa15.14■□□□□ 0.01
TMEM248-204ENST00000424964 MKRN2Q9H000 416 aaKnown RBP15.14■□□□□ 0.01
TMEM248-204ENST00000424964 LRRC19Q9H756 370 aa15.14■□□□□ 0.01
TMEM248-204ENST00000424964 FBRSQ9HAH7 460 aa15.14■□□□□ 0.01
TMEM248-204ENST00000424964 ETNK2Q9NVF9 386 aa15.14■□□□□ 0.01
TMEM248-204ENST00000424964 INVSQ9Y283 1065 aa15.14■□□□□ 0.01
TMEM248-204ENST00000424964 MFHAS1Q9Y4C4 1052 aa15.14■□□□□ 0.01
TMEM248-204ENST00000424964 WDFY4Q6ZS81 3184 aa15.14■□□□□ 0.01
TMEM248-204ENST00000424964 MUC6Q6W4X9 2439 aa15.14■□□□□ 0.01
TMEM248-204ENST00000424964 GRID2IPA4D2P6 1211 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms