RNA–Protein interactions for RNA: ENST00000422785.7

CDCA3-202, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 2,760 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-202ENST00000422785 C16orf46Q6P387 395 aa14.05□□□□□ -0.16
CDCA3-202ENST00000422785 USP33Q8TEY7 942 aa14.05□□□□□ -0.16
CDCA3-202ENST00000422785 FCRL5Q96RD9 977 aa14.05□□□□□ -0.16
CDCA3-202ENST00000422785 THAP1Q9NVV9 213 aa14.05□□□□□ -0.16
CDCA3-202ENST00000422785 NUDT5Q9UKK9 219 aa14.05□□□□□ -0.16
CDCA3-202ENST00000422785 TLR6Q9Y2C9 796 aa14.05□□□□□ -0.16
CDCA3-202ENST00000422785 E9PAM4 449 aa14.05□□□□□ -0.16
CDCA3-202ENST00000422785 ANXA9O76027 345 aa14.05□□□□□ -0.16
CDCA3-202ENST00000422785 TPH1P17752 444 aa14.05□□□□□ -0.16
CDCA3-202ENST00000422785 MLLT6P55198 1093 aaPredicted RBP14.05□□□□□ -0.16
CDCA3-202ENST00000422785 IRX4P78413 519 aa14.05□□□□□ -0.16
CDCA3-202ENST00000422785 DDR2Q16832 855 aa14.05□□□□□ -0.16
CDCA3-202ENST00000422785 HSP90AA5PQ58FG0 334 aa14.05□□□□□ -0.16
CDCA3-202ENST00000422785 VARS2Q5ST30 1063 aaKnown RBP14.05□□□□□ -0.16
CDCA3-202ENST00000422785 MBLAC2Q68D91 279 aa14.05□□□□□ -0.16
CDCA3-202ENST00000422785 KCNMB4Q86W47 210 aa14.05□□□□□ -0.16
CDCA3-202ENST00000422785 LRRC49Q8IUZ0 686 aa14.05□□□□□ -0.16
CDCA3-202ENST00000422785 ARHGAP18Q8N392 663 aa14.05□□□□□ -0.16
CDCA3-202ENST00000422785 DCLK2Q8N568 766 aa14.05□□□□□ -0.16
CDCA3-202ENST00000422785 RTL3Q8N8U3 475 aaKnown RBP14.05□□□□□ -0.16
CDCA3-202ENST00000422785 PPP1R2P1Q96PQ5 205 aa14.05□□□□□ -0.16
CDCA3-202ENST00000422785 AGAP2Q99490 1192 aa14.05□□□□□ -0.16
CDCA3-202ENST00000422785 KIFC1Q9BW19 673 aa14.05□□□□□ -0.16
CDCA3-202ENST00000422785 GLOD4Q9HC38 313 aa14.05□□□□□ -0.16
CDCA3-202ENST00000422785 SNX15Q9NRS6 342 aa14.05□□□□□ -0.16
CDCA3-202ENST00000422785 TMEM161AQ9NX61 479 aa14.05□□□□□ -0.16
CDCA3-202ENST00000422785 FNIP2Q9P278 1114 aa14.05□□□□□ -0.16
CDCA3-202ENST00000422785 PCDHB5Q9Y5E4 795 aa14.05□□□□□ -0.16
CDCA3-202ENST00000422785 A0A1W2PQ45 241 aaPredicted RBP14.05□□□□□ -0.16
CDCA3-202ENST00000422785 A0A1W2PQY0 241 aa14.05□□□□□ -0.16
CDCA3-202ENST00000422785 SLC2A3P11169 496 aa14.05□□□□□ -0.16
CDCA3-202ENST00000422785 PTPN4P29074 926 aa14.05□□□□□ -0.16
CDCA3-202ENST00000422785 MAGEA11P43364 429 aa14.05□□□□□ -0.16
CDCA3-202ENST00000422785 SERPINB8P50452 374 aa14.05□□□□□ -0.16
CDCA3-202ENST00000422785 PPM1JQ5JR12 505 aa14.05□□□□□ -0.16
CDCA3-202ENST00000422785 FAM91A1Q658Y4 838 aa14.05□□□□□ -0.16
CDCA3-202ENST00000422785 FSTL4Q6MZW2 842 aa14.05□□□□□ -0.16
CDCA3-202ENST00000422785 TIGD7Q6NT04 549 aaPredicted RBP14.05□□□□□ -0.16
CDCA3-202ENST00000422785 ARID3BQ8IVW6 561 aaPredicted RBP14.05□□□□□ -0.16
CDCA3-202ENST00000422785 PXYLP1Q8TE99 480 aa14.05□□□□□ -0.16
CDCA3-202ENST00000422785 SLC39A13Q96H72 371 aa14.05□□□□□ -0.16
CDCA3-202ENST00000422785 C20orf27Q9GZN8 174 aa14.05□□□□□ -0.16
CDCA3-202ENST00000422785 ZNF395Q9H8N7 513 aaPredicted RBP14.05□□□□□ -0.16
CDCA3-202ENST00000422785 C20orf96Q9NUD7 363 aaPredicted RBP14.05□□□□□ -0.16
CDCA3-202ENST00000422785 NDFIP2Q9NV92 336 aa14.05□□□□□ -0.16
CDCA3-202ENST00000422785 PLXNA3P51805 1871 aa14.04□□□□□ -0.16
CDCA3-202ENST00000422785 TTC3P53804 2025 aa14.04□□□□□ -0.16
CDCA3-202ENST00000422785 WASH4PA8MWX3 477 aa14.04□□□□□ -0.16
CDCA3-202ENST00000422785 MOCS2O96007 188 aaPredicted RBP14.04□□□□□ -0.16
CDCA3-202ENST00000422785 PROCP04070 461 aa14.04□□□□□ -0.16
CDCA3-202ENST00000422785 PRKCGP05129 697 aa14.04□□□□□ -0.16
CDCA3-202ENST00000422785 CSE1LP55060 971 aaKnown RBP14.04□□□□□ -0.16
CDCA3-202ENST00000422785 KRT72Q14CN4 511 aa14.04□□□□□ -0.16
CDCA3-202ENST00000422785 SDHAF4Q5VUM1 108 aa14.04□□□□□ -0.16
CDCA3-202ENST00000422785 C14orf80Q86SX3 495 aa14.04□□□□□ -0.16
CDCA3-202ENST00000422785 SPATA22Q8NHS9 363 aa14.04□□□□□ -0.16
CDCA3-202ENST00000422785 PPP1R14CQ8TAE6 165 aa14.04□□□□□ -0.16
CDCA3-202ENST00000422785 RAET1EQ8TD07 263 aa14.04□□□□□ -0.16
CDCA3-202ENST00000422785 ZNF419Q96HQ0 510 aaPredicted RBP14.04□□□□□ -0.16
CDCA3-202ENST00000422785 TBL1YQ9BQ87 522 aa14.04□□□□□ -0.16
CDCA3-202ENST00000422785 MCMBPQ9BTE3 642 aa14.04□□□□□ -0.16
CDCA3-202ENST00000422785 TBC1D10AQ9BXI6 508 aa14.04□□□□□ -0.16
CDCA3-202ENST00000422785 STARD7Q9NQZ5 370 aa14.04□□□□□ -0.16
CDCA3-202ENST00000422785 FBXO6Q9NRD1 293 aaPredicted RBP14.04□□□□□ -0.16
CDCA3-202ENST00000422785 IL37Q9NZH6 218 aa14.04□□□□□ -0.16
CDCA3-202ENST00000422785 MAGED2Q9UNF1 606 aaPredicted RBP14.04□□□□□ -0.16
CDCA3-202ENST00000422785 HBS1LQ9Y450 684 aaKnown RBP14.04□□□□□ -0.16
CDCA3-202ENST00000422785 C2orf71A6NGG8 1288 aa14.04□□□□□ -0.16
CDCA3-202ENST00000422785 TIMM44O43615 452 aa14.04□□□□□ -0.16
CDCA3-202ENST00000422785 FGF3P11487 239 aaPredicted RBP14.04□□□□□ -0.16
CDCA3-202ENST00000422785 NMBRP28336 390 aa14.04□□□□□ -0.16
CDCA3-202ENST00000422785 GRK4P32298 578 aa14.04□□□□□ -0.16
CDCA3-202ENST00000422785 GPR15P49685 360 aa14.04□□□□□ -0.16
CDCA3-202ENST00000422785 HSF5Q4G112 596 aaPredicted RBP14.04□□□□□ -0.16
CDCA3-202ENST00000422785 SWT1Q5T5J6 900 aaKnown RBP14.04□□□□□ -0.16
CDCA3-202ENST00000422785 LHX8Q68G74 356 aa14.04□□□□□ -0.16
CDCA3-202ENST00000422785 ZCCHC23Q6ZST2 131 aa14.04□□□□□ -0.16
CDCA3-202ENST00000422785 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.04□□□□□ -0.16
CDCA3-202ENST00000422785 CD99L2Q8TCZ2 262 aa14.04□□□□□ -0.16
CDCA3-202ENST00000422785 PTCD3Q96EY7 689 aaKnown RBP14.04□□□□□ -0.16
CDCA3-202ENST00000422785 TLE6Q9H808 572 aa14.04□□□□□ -0.16
CDCA3-202ENST00000422785 A8MUI8 341 aa14.03□□□□□ -0.16
CDCA3-202ENST00000422785 MPOP05164 745 aa14.03□□□□□ -0.16
CDCA3-202ENST00000422785 RPL10AP62906 217 aaKnown RBP14.03□□□□□ -0.16
CDCA3-202ENST00000422785 MPP3Q13368 585 aa14.03□□□□□ -0.16
CDCA3-202ENST00000422785 MRPL58Q14197 206 aaKnown RBP14.03□□□□□ -0.16
CDCA3-202ENST00000422785 PCLAFQ15004 111 aa14.03□□□□□ -0.16
CDCA3-202ENST00000422785 CCDC153Q494R4 210 aa14.03□□□□□ -0.16
CDCA3-202ENST00000422785 CTXN3Q4LDR2 81 aa14.03□□□□□ -0.16
CDCA3-202ENST00000422785 PDPK2PQ6A1A2 396 aa14.03□□□□□ -0.16
CDCA3-202ENST00000422785 CMC1Q7Z7K0 106 aa14.03□□□□□ -0.16
CDCA3-202ENST00000422785 REM2Q8IYK8 340 aaPredicted RBP14.03□□□□□ -0.16
CDCA3-202ENST00000422785 NSL1Q96IY1 281 aa14.03□□□□□ -0.16
CDCA3-202ENST00000422785 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.03□□□□□ -0.16
CDCA3-202ENST00000422785 WWP1Q9H0M0 922 aa14.03□□□□□ -0.16
CDCA3-202ENST00000422785 ARL8BQ9NVJ2 186 aa14.03□□□□□ -0.16
CDCA3-202ENST00000422785 NSMCE4AQ9NXX6 385 aa14.03□□□□□ -0.16
CDCA3-202ENST00000422785 MPP6Q9NZW5 540 aa14.03□□□□□ -0.16
CDCA3-202ENST00000422785 TMEM216Q9P0N5 145 aa14.03□□□□□ -0.16
CDCA3-202ENST00000422785 FCHO1O14526 889 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms