RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 ZXDAP98168 799 aa16.06■□□□□ 0.16
DDX55-203ENST00000421670 NOMO1Q15155 1222 aa16.06■□□□□ 0.16
DDX55-203ENST00000421670 TMEM196Q5HYL7 178 aa16.06■□□□□ 0.16
DDX55-203ENST00000421670 MBLAC2Q68D91 279 aa16.06■□□□□ 0.16
DDX55-203ENST00000421670 FSTL4Q6MZW2 842 aa16.06■□□□□ 0.16
DDX55-203ENST00000421670 LINGO4Q6UY18 593 aa16.06■□□□□ 0.16
DDX55-203ENST00000421670 ZC3H18Q86VM9 953 aaKnown RBP16.06■□□□□ 0.16
DDX55-203ENST00000421670 DCAF4L2Q8NA75 395 aa16.06■□□□□ 0.16
DDX55-203ENST00000421670 KIF18AQ8NI77 898 aa16.06■□□□□ 0.16
DDX55-203ENST00000421670 ACTRT1Q8TDG2 376 aa16.06■□□□□ 0.16
DDX55-203ENST00000421670 WFIKKN2Q8TEU8 576 aa16.06■□□□□ 0.16
DDX55-203ENST00000421670 CYB5D2Q8WUJ1 264 aa16.06■□□□□ 0.16
DDX55-203ENST00000421670 LGMNQ99538 433 aa16.06■□□□□ 0.16
DDX55-203ENST00000421670 C2orf49Q9BVC5 232 aaPredicted RBP16.06■□□□□ 0.16
DDX55-203ENST00000421670 ZDHHC4Q9NPG8 344 aa16.06■□□□□ 0.16
DDX55-203ENST00000421670 TTC7AQ9ULT0 858 aaPredicted RBP16.06■□□□□ 0.16
DDX55-203ENST00000421670 ACTL7AQ9Y615 435 aa16.06■□□□□ 0.16
DDX55-203ENST00000421670 ANKRD36A6QL64 1941 aa16.06■□□□□ 0.16
DDX55-203ENST00000421670 POLR2EP19388 210 aaKnown RBP16.05■□□□□ 0.16
DDX55-203ENST00000421670 STK19P49842 368 aaPredicted RBP16.05■□□□□ 0.16
DDX55-203ENST00000421670 SEC13P55735 322 aa16.05■□□□□ 0.16
DDX55-203ENST00000421670 ARF5P84085 180 aa16.05■□□□□ 0.16
DDX55-203ENST00000421670 PRKCQQ04759 706 aa16.05■□□□□ 0.16
DDX55-203ENST00000421670 DMC1Q14565 340 aa16.05■□□□□ 0.16
DDX55-203ENST00000421670 PREPLQ4J6C6 727 aaPredicted RBP16.05■□□□□ 0.16
DDX55-203ENST00000421670 ZNF852Q6ZMS4 543 aa16.05■□□□□ 0.16
DDX55-203ENST00000421670 CCNYQ8ND76 341 aa16.05■□□□□ 0.16
DDX55-203ENST00000421670 C1orf54Q8WWF1 131 aa16.05■□□□□ 0.16
DDX55-203ENST00000421670 RPL10LQ96L21 214 aaKnown RBP16.05■□□□□ 0.16
DDX55-203ENST00000421670 AP1M1Q9BXS5 423 aa16.05■□□□□ 0.16
DDX55-203ENST00000421670 SP110Q9HB58 689 aa16.05■□□□□ 0.16
DDX55-203ENST00000421670 IPO11Q9UI26 975 aaKnown RBP16.05■□□□□ 0.16
DDX55-203ENST00000421670 HPCAL4Q9UM19 191 aa16.05■□□□□ 0.16
DDX55-203ENST00000421670 TECTAO75443 2155 aa16.05■□□□□ 0.16
DDX55-203ENST00000421670 K7EQS6 105 aa16.04■□□□□ 0.16
DDX55-203ENST00000421670 PDE2AO00408 941 aaPredicted RBP16.04■□□□□ 0.16
DDX55-203ENST00000421670 PPP1R12AO14974 1030 aaPredicted RBP16.04■□□□□ 0.16
DDX55-203ENST00000421670 MCF2LO15068 1137 aa16.04■□□□□ 0.16
DDX55-203ENST00000421670 KDELR3O43731 214 aa16.04■□□□□ 0.16
DDX55-203ENST00000421670 MAFKO60675 156 aa16.04■□□□□ 0.16
DDX55-203ENST00000421670 ZMPSTE24O75844 475 aa16.04■□□□□ 0.16
DDX55-203ENST00000421670 MX2P20592 715 aa16.04■□□□□ 0.16
DDX55-203ENST00000421670 EIF3EP60228 445 aaKnown RBP16.04■□□□□ 0.16
DDX55-203ENST00000421670 GRSF1Q12849 480 aaKnown RBP eCLIP16.04■□□□□ 0.16
DDX55-203ENST00000421670 PDK1Q15118 436 aa16.04■□□□□ 0.16
DDX55-203ENST00000421670 FAM182AQ5T1J6 154 aa16.04■□□□□ 0.16
DDX55-203ENST00000421670 SUGP1Q8IWZ8 645 aaKnown RBP16.04■□□□□ 0.16
DDX55-203ENST00000421670 HDAC11Q96DB2 347 aa16.04■□□□□ 0.16
DDX55-203ENST00000421670 C10orf88Q9H8K7 445 aa16.04■□□□□ 0.16
DDX55-203ENST00000421670 ELOVL2Q9NXB9 296 aa16.04■□□□□ 0.16
DDX55-203ENST00000421670 RAD54BQ9Y620 910 aa16.04■□□□□ 0.16
DDX55-203ENST00000421670 CKAP5Q14008 2032 aa16.04■□□□□ 0.16
DDX55-203ENST00000421670 MAN2B1O00754 1011 aa16.04■□□□□ 0.16
DDX55-203ENST00000421670 NCAM2O15394 837 aa16.04■□□□□ 0.16
DDX55-203ENST00000421670 PRAMEF11O60813 436 aa16.04■□□□□ 0.16
DDX55-203ENST00000421670 MT-CO1P00395 513 aa16.04■□□□□ 0.16
DDX55-203ENST00000421670 ECT2LQ008S8 904 aa16.04■□□□□ 0.16
DDX55-203ENST00000421670 AP1B1Q10567 949 aa16.04■□□□□ 0.16
DDX55-203ENST00000421670 EIF4HQ15056 248 aaKnown RBP16.04■□□□□ 0.16
DDX55-203ENST00000421670 TTC13Q8NBP0 860 aa16.04■□□□□ 0.16
DDX55-203ENST00000421670 EXOC4Q96A65 974 aa16.04■□□□□ 0.16
DDX55-203ENST00000421670 TTC17Q96AE7 1141 aa16.04■□□□□ 0.16
DDX55-203ENST00000421670 ACDQ96AP0 544 aa16.04■□□□□ 0.16
DDX55-203ENST00000421670 QKIQ96PU8 341 aaKnown RBP eCLIP16.04■□□□□ 0.16
DDX55-203ENST00000421670 NAP1L3Q99457 506 aaPredicted RBP16.04■□□□□ 0.16
DDX55-203ENST00000421670 FOXQ1Q9C009 403 aa16.04■□□□□ 0.16
DDX55-203ENST00000421670 PDFQ9HBH1 243 aa16.04■□□□□ 0.16
DDX55-203ENST00000421670 RBM12Q9NTZ6 932 aaKnown RBP16.04■□□□□ 0.16
DDX55-203ENST00000421670 HCN2Q9UL51 889 aa16.04■□□□□ 0.16
DDX55-203ENST00000421670 DNPEPQ9ULA0 475 aa16.04■□□□□ 0.16
DDX55-203ENST00000421670 H7C0C1 242 aa16.03■□□□□ 0.16
DDX55-203ENST00000421670 KRIT1O00522 736 aa16.03■□□□□ 0.16
DDX55-203ENST00000421670 DCXO43602 365 aa16.03■□□□□ 0.16
DDX55-203ENST00000421670 DLDP09622 509 aaKnown RBP16.03■□□□□ 0.16
DDX55-203ENST00000421670 RBP3P10745 1247 aa16.03■□□□□ 0.16
DDX55-203ENST00000421670 VAV1P15498 845 aa16.03■□□□□ 0.16
DDX55-203ENST00000421670 DRD1P21728 446 aa16.03■□□□□ 0.16
DDX55-203ENST00000421670 TARSP26639 723 aaKnown RBP16.03■□□□□ 0.16
DDX55-203ENST00000421670 ATP5OP48047 213 aa16.03■□□□□ 0.16
DDX55-203ENST00000421670 STARD6P59095 220 aa16.03■□□□□ 0.16
DDX55-203ENST00000421670 IL10RBQ08334 325 aa16.03■□□□□ 0.16
DDX55-203ENST00000421670 PPIDQ08752 370 aaKnown RBP16.03■□□□□ 0.16
DDX55-203ENST00000421670 SNX1Q13596 522 aa16.03■□□□□ 0.16
DDX55-203ENST00000421670 CCINQ13939 588 aa16.03■□□□□ 0.16
DDX55-203ENST00000421670 UBXN2BQ14CS0 331 aa16.03■□□□□ 0.16
DDX55-203ENST00000421670 PRKD1Q15139 912 aaPredicted RBP16.03■□□□□ 0.16
DDX55-203ENST00000421670 PTPRNQ16849 979 aa16.03■□□□□ 0.16
DDX55-203ENST00000421670 EMC10Q5UCC4 262 aa16.03■□□□□ 0.16
DDX55-203ENST00000421670 EGFLAMQ63HQ2 1017 aa16.03■□□□□ 0.16
DDX55-203ENST00000421670 NUDT18Q6ZVK8 323 aa16.03■□□□□ 0.16
DDX55-203ENST00000421670 BZW1Q7L1Q6 419 aaKnown RBP16.03■□□□□ 0.16
DDX55-203ENST00000421670 PRELID2Q8N945 189 aa16.03■□□□□ 0.16
DDX55-203ENST00000421670 TFB1MQ8WVM0 346 aaKnown RBP16.03■□□□□ 0.16
DDX55-203ENST00000421670 MAIP1Q8WWC4 291 aa16.03■□□□□ 0.16
DDX55-203ENST00000421670 TBC1D17Q9HA65 648 aa16.03■□□□□ 0.16
DDX55-203ENST00000421670 SLC25A13Q9UJS0 675 aa16.03■□□□□ 0.16
DDX55-203ENST00000421670 ERVW-1Q9UQF0 538 aa16.03■□□□□ 0.16
DDX55-203ENST00000421670 MTF2Q9Y483 593 aaPredicted RBP16.03■□□□□ 0.16
DDX55-203ENST00000421670 A0A0A0MRY4 1105 aa16.02■□□□□ 0.16
DDX55-203ENST00000421670 KANSL1LA0AUZ9 987 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms