RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 WDCPQ9H6R7 721 aa15.51■□□□□ 0.07
UBXN4-203ENST00000416538 TM7SF3Q9NS93 570 aa15.51■□□□□ 0.07
UBXN4-203ENST00000416538 LIMA1Q9UHB6 759 aaKnown RBP15.51■□□□□ 0.07
UBXN4-203ENST00000416538 VPS51Q9UID3 782 aa15.51■□□□□ 0.07
UBXN4-203ENST00000416538 PCOLCE2Q9UKZ9 415 aa15.51■□□□□ 0.07
UBXN4-203ENST00000416538 NEU3Q9UQ49 428 aa15.51■□□□□ 0.07
UBXN4-203ENST00000416538 GOLGA4Q13439 2230 aaKnown RBP15.51■□□□□ 0.07
UBXN4-203ENST00000416538 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.5■□□□□ 0.07
UBXN4-203ENST00000416538 A0A1W2PPC4 97 aa15.5■□□□□ 0.07
UBXN4-203ENST00000416538 DRGXA6NNA5 263 aa15.5■□□□□ 0.07
UBXN4-203ENST00000416538 E9PAM4 449 aa15.5■□□□□ 0.07
UBXN4-203ENST00000416538 H0Y8X5 98 aa15.5■□□□□ 0.07
UBXN4-203ENST00000416538 SMAD6O43541 496 aaKnown RBP15.5■□□□□ 0.07
UBXN4-203ENST00000416538 RNASEH1O60930 286 aaKnown RBP15.5■□□□□ 0.07
UBXN4-203ENST00000416538 RTN2O75298 545 aa15.5■□□□□ 0.07
UBXN4-203ENST00000416538 ADH1BP00325 375 aa15.5■□□□□ 0.07
UBXN4-203ENST00000416538 IL1BP01584 269 aa15.5■□□□□ 0.07
UBXN4-203ENST00000416538 RHOCP08134 193 aa15.5■□□□□ 0.07
UBXN4-203ENST00000416538 ZNF883P0CG24 379 aa15.5■□□□□ 0.07
UBXN4-203ENST00000416538 SRCP12931 536 aa15.5■□□□□ 0.07
UBXN4-203ENST00000416538 ATP1A3P13637 1013 aa15.5■□□□□ 0.07
UBXN4-203ENST00000416538 GOT1P17174 413 aa15.5■□□□□ 0.07
UBXN4-203ENST00000416538 C5AR1P21730 350 aa15.5■□□□□ 0.07
UBXN4-203ENST00000416538 RDXP35241 583 aaKnown RBP15.5■□□□□ 0.07
UBXN4-203ENST00000416538 CTSKP43235 329 aa15.5■□□□□ 0.07
UBXN4-203ENST00000416538 SNX16P57768 344 aa15.5■□□□□ 0.07
UBXN4-203ENST00000416538 MYL5Q02045 173 aa15.5■□□□□ 0.07
UBXN4-203ENST00000416538 SULT2A1Q06520 285 aa15.5■□□□□ 0.07
UBXN4-203ENST00000416538 ZNF177Q13360 481 aaPredicted RBP15.5■□□□□ 0.07
UBXN4-203ENST00000416538 DLG2Q15700 870 aa15.5■□□□□ 0.07
UBXN4-203ENST00000416538 STX1AQ16623 288 aa15.5■□□□□ 0.07
UBXN4-203ENST00000416538 AGBL4Q5VU57 503 aa15.5■□□□□ 0.07
UBXN4-203ENST00000416538 PNPLA1Q8N8W4 532 aa15.5■□□□□ 0.07
UBXN4-203ENST00000416538 OR7D4Q8NG98 312 aa15.5■□□□□ 0.07
UBXN4-203ENST00000416538 OR2T34Q8NGX1 318 aa15.5■□□□□ 0.07
UBXN4-203ENST00000416538 SPAG5Q96R06 1193 aa15.5■□□□□ 0.07
UBXN4-203ENST00000416538 OMDQ99983 421 aa15.5■□□□□ 0.07
UBXN4-203ENST00000416538 TOR4AQ9NXH8 423 aa15.5■□□□□ 0.07
UBXN4-203ENST00000416538 TMEM63CQ9P1W3 806 aa15.5■□□□□ 0.07
UBXN4-203ENST00000416538 HS3ST2Q9Y278 367 aa15.5■□□□□ 0.07
UBXN4-203ENST00000416538 NCKAP1Q9Y2A7 1128 aa15.5■□□□□ 0.07
UBXN4-203ENST00000416538 ANKRD6Q9Y2G4 727 aa15.5■□□□□ 0.07
UBXN4-203ENST00000416538 LRRK1Q38SD2 2015 aa15.5■□□□□ 0.07
UBXN4-203ENST00000416538 PKD1L2Q7Z442 2459 aa15.49■□□□□ 0.07
UBXN4-203ENST00000416538 A0A1W2PR77 199 aa15.49■□□□□ 0.07
UBXN4-203ENST00000416538 ENDOD1O94919 500 aa15.49■□□□□ 0.07
UBXN4-203ENST00000416538 PROS1P07225 676 aa15.49■□□□□ 0.07
UBXN4-203ENST00000416538 FTH1P19P0C7X4 201 aa15.49■□□□□ 0.07
UBXN4-203ENST00000416538 UNGP13051 313 aaPredicted RBP15.49■□□□□ 0.07
UBXN4-203ENST00000416538 RRM1P23921 792 aa15.49■□□□□ 0.07
UBXN4-203ENST00000416538 ATP11AP98196 1134 aa15.49■□□□□ 0.07
UBXN4-203ENST00000416538 IL9RQ01113 521 aa15.49■□□□□ 0.07
UBXN4-203ENST00000416538 TRIP6Q15654 476 aaKnown RBP15.49■□□□□ 0.07
UBXN4-203ENST00000416538 MANEALQ5VSG8 457 aa15.49■□□□□ 0.07
UBXN4-203ENST00000416538 LINGO4Q6UY18 593 aa15.49■□□□□ 0.07
UBXN4-203ENST00000416538 DBX2Q6ZNG2 339 aa15.49■□□□□ 0.07
UBXN4-203ENST00000416538 ARCQ7LC44 396 aa15.49■□□□□ 0.07
UBXN4-203ENST00000416538 RAB44Q7Z6P3 723 aaPredicted RBP15.49■□□□□ 0.07
UBXN4-203ENST00000416538 SLCO6A1Q86UG4 719 aa15.49■□□□□ 0.07
UBXN4-203ENST00000416538 ZNF677Q86XU0 584 aa15.49■□□□□ 0.07
UBXN4-203ENST00000416538 CHCHD4Q8N4Q1 142 aa15.49■□□□□ 0.07
UBXN4-203ENST00000416538 DCAF4L2Q8NA75 395 aa15.49■□□□□ 0.07
UBXN4-203ENST00000416538 MUC3BQ9H195 1237 aa15.49■□□□□ 0.07
UBXN4-203ENST00000416538 ANO10Q9NW15 660 aa15.49■□□□□ 0.07
UBXN4-203ENST00000416538 SLC25A13Q9UJS0 675 aa15.49■□□□□ 0.07
UBXN4-203ENST00000416538 PPM1HQ9ULR3 514 aa15.49■□□□□ 0.07
UBXN4-203ENST00000416538 ACTL7AQ9Y615 435 aa15.49■□□□□ 0.07
UBXN4-203ENST00000416538 ANKRD36A6QL64 1941 aa15.49■□□□□ 0.07
UBXN4-203ENST00000416538 MYLKQ15746 1914 aa15.49■□□□□ 0.07
UBXN4-203ENST00000416538 ZFHX4Q86UP3 3567 aa15.49■□□□□ 0.07
UBXN4-203ENST00000416538 C2CD4BA6NLJ0 364 aa15.48■□□□□ 0.07
UBXN4-203ENST00000416538 FAM72CH0Y354 149 aa15.48■□□□□ 0.07
UBXN4-203ENST00000416538 LATO43561 262 aa15.48■□□□□ 0.07
UBXN4-203ENST00000416538 BNIP3LO60238 219 aa15.48■□□□□ 0.07
UBXN4-203ENST00000416538 ZNF821O75541 412 aaPredicted RBP15.48■□□□□ 0.07
UBXN4-203ENST00000416538 ZMPSTE24O75844 475 aa15.48■□□□□ 0.07
UBXN4-203ENST00000416538 F9P00740 461 aa15.48■□□□□ 0.07
UBXN4-203ENST00000416538 OXCT1P55809 520 aa15.48■□□□□ 0.07
UBXN4-203ENST00000416538 TAS2R38P59533 333 aa15.48■□□□□ 0.07
UBXN4-203ENST00000416538 RACK1P63244 317 aaKnown RBP15.48■□□□□ 0.07
UBXN4-203ENST00000416538 CNTN1Q12860 1018 aa15.48■□□□□ 0.07
UBXN4-203ENST00000416538 MTA1Q13330 715 aa15.48■□□□□ 0.07
UBXN4-203ENST00000416538 SHBQ15464 509 aa15.48■□□□□ 0.07
UBXN4-203ENST00000416538 CDO1Q16878 200 aa15.48■□□□□ 0.07
UBXN4-203ENST00000416538 ZNF423Q2M1K9 1284 aa15.48■□□□□ 0.07
UBXN4-203ENST00000416538 CCDC14Q49A88 953 aa15.48■□□□□ 0.07
UBXN4-203ENST00000416538 ACCSLQ4AC99 568 aa15.48■□□□□ 0.07
UBXN4-203ENST00000416538 PRAMEF14Q5SWL7 426 aa15.48■□□□□ 0.07
UBXN4-203ENST00000416538 FKBP15Q5T1M5 1219 aa15.48■□□□□ 0.07
UBXN4-203ENST00000416538 FAM72AQ5TYM5 149 aa15.48■□□□□ 0.07
UBXN4-203ENST00000416538 FAM72DQ6L9T8 149 aa15.48■□□□□ 0.07
UBXN4-203ENST00000416538 IL27RAQ6UWB1 636 aa15.48■□□□□ 0.07
UBXN4-203ENST00000416538 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.48■□□□□ 0.07
UBXN4-203ENST00000416538 SND1Q7KZF4 910 aaKnown RBP eCLIP15.48■□□□□ 0.07
UBXN4-203ENST00000416538 FAM72BQ86X60 149 aa15.48■□□□□ 0.07
UBXN4-203ENST00000416538 AOPEPQ8N6M6 819 aa15.48■□□□□ 0.07
UBXN4-203ENST00000416538 CHST14Q8NCH0 376 aa15.48■□□□□ 0.07
UBXN4-203ENST00000416538 OR14C36Q8NHC7 312 aa15.48■□□□□ 0.07
UBXN4-203ENST00000416538 PIP4K2CQ8TBX8 421 aa15.48■□□□□ 0.07
UBXN4-203ENST00000416538 RXFP2Q8WXD0 754 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms