RNA–Protein interactions for RNA: ENST00000415380.6

SCARB1-203, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2 BASIC

Gene SCARB1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-203ENST00000415380 PMLP29590 882 aa18.34■□□□□ 0.53
SCARB1-203ENST00000415380 GRIA4P48058 902 aa18.34■□□□□ 0.53
SCARB1-203ENST00000415380 TMEM62Q0P6H9 643 aa18.34■□□□□ 0.53
SCARB1-203ENST00000415380 SLC27A1Q6PCB7 646 aa18.34■□□□□ 0.53
SCARB1-203ENST00000415380 RP9Q8TA86 221 aaKnown RBP18.34■□□□□ 0.53
SCARB1-203ENST00000415380 SLC16A10Q8TF71 515 aa18.34■□□□□ 0.53
SCARB1-203ENST00000415380 RCN3Q96D15 328 aa18.34■□□□□ 0.53
SCARB1-203ENST00000415380 APOL2Q9BQE5 337 aa18.34■□□□□ 0.53
SCARB1-203ENST00000415380 TASP1Q9H6P5 420 aa18.34■□□□□ 0.53
SCARB1-203ENST00000415380 CHRAC1Q9NRG0 131 aa18.34■□□□□ 0.53
SCARB1-203ENST00000415380 UBAP1Q9NZ09 502 aa18.34■□□□□ 0.53
SCARB1-203ENST00000415380 SLC39A10Q9ULF5 831 aa18.34■□□□□ 0.53
SCARB1-203ENST00000415380 RALGAPA2Q2PPJ7 1873 aa18.34■□□□□ 0.53
SCARB1-203ENST00000415380 GOLGA8TH3BQL2 631 aa18.34■□□□□ 0.53
SCARB1-203ENST00000415380 ERCC2P18074 760 aa18.34■□□□□ 0.53
SCARB1-203ENST00000415380 MSX2P35548 267 aaPredicted RBP18.34■□□□□ 0.53
SCARB1-203ENST00000415380 NDUFV1P49821 464 aa18.34■□□□□ 0.53
SCARB1-203ENST00000415380 PGGT1BP53609 377 aa18.34■□□□□ 0.53
SCARB1-203ENST00000415380 CSE1LP55060 971 aaKnown RBP18.34■□□□□ 0.53
SCARB1-203ENST00000415380 CYLC2Q14093 348 aaPredicted RBP18.34■□□□□ 0.53
SCARB1-203ENST00000415380 FLOT2Q14254 428 aa18.34■□□□□ 0.53
SCARB1-203ENST00000415380 PIGGQ5H8A4 983 aa18.34■□□□□ 0.53
SCARB1-203ENST00000415380 KCTD11Q693B1 232 aa18.34■□□□□ 0.53
SCARB1-203ENST00000415380 TAPT1Q6NXT6 567 aa18.34■□□□□ 0.53
SCARB1-203ENST00000415380 MAMDC4Q6UXC1 1216 aa18.34■□□□□ 0.53
SCARB1-203ENST00000415380 ZYG11AQ6WRX3 759 aa18.34■□□□□ 0.53
SCARB1-203ENST00000415380 SPATA24Q86W54 205 aa18.34■□□□□ 0.53
SCARB1-203ENST00000415380 TMEM151AQ8N4L1 468 aa18.34■□□□□ 0.53
SCARB1-203ENST00000415380 ADAM32Q8TC27 787 aa18.34■□□□□ 0.53
SCARB1-203ENST00000415380 LRGUKQ96M69 825 aa18.34■□□□□ 0.53
SCARB1-203ENST00000415380 MLPHQ9BV36 600 aaPredicted RBP18.34■□□□□ 0.53
SCARB1-203ENST00000415380 NUF2Q9BZD4 464 aa18.34■□□□□ 0.53
SCARB1-203ENST00000415380 NXF3Q9H4D5 531 aaKnown RBP18.34■□□□□ 0.53
SCARB1-203ENST00000415380 EPB41L1Q9H4G0 881 aa18.34■□□□□ 0.53
SCARB1-203ENST00000415380 LTBP3Q9NS15 1303 aa18.33■□□□□ 0.53
SCARB1-203ENST00000415380 BRCA1P38398 1863 aaKnown RBP18.33■□□□□ 0.53
SCARB1-203ENST00000415380 PIRO00625 290 aa18.33■□□□□ 0.53
SCARB1-203ENST00000415380 PIGNO95427 931 aa18.33■□□□□ 0.53
SCARB1-203ENST00000415380 SBK3P0C264 359 aa18.33■□□□□ 0.53
SCARB1-203ENST00000415380 SPATA31D3P0C874 917 aa18.33■□□□□ 0.53
SCARB1-203ENST00000415380 CYP2B6P20813 491 aa18.33■□□□□ 0.53
SCARB1-203ENST00000415380 CD68P34810 354 aaPredicted RBP18.33■□□□□ 0.53
SCARB1-203ENST00000415380 GRM3Q14832 879 aa18.33■□□□□ 0.53
SCARB1-203ENST00000415380 GRIK4Q16099 956 aa18.33■□□□□ 0.53
SCARB1-203ENST00000415380 ARL13AQ5H913 290 aaPredicted RBP18.33■□□□□ 0.53
SCARB1-203ENST00000415380 LIPMQ5VYY2 423 aa18.33■□□□□ 0.53
SCARB1-203ENST00000415380 ALKAL1Q6UXT8 129 aa18.33■□□□□ 0.53
SCARB1-203ENST00000415380 SPATA31D4Q6ZUB0 917 aa18.33■□□□□ 0.53
SCARB1-203ENST00000415380 ZNF410Q86VK4 478 aa18.33■□□□□ 0.53
SCARB1-203ENST00000415380 RNF169Q8NCN4 708 aa18.33■□□□□ 0.53
SCARB1-203ENST00000415380 PPTC7Q8NI37 304 aa18.33■□□□□ 0.53
SCARB1-203ENST00000415380 CLIC5Q9NZA1 410 aa18.33■□□□□ 0.53
SCARB1-203ENST00000415380 MID2Q9UJV3 735 aa18.33■□□□□ 0.53
SCARB1-203ENST00000415380 PCDHGB4Q9UN71 923 aa18.33■□□□□ 0.53
SCARB1-203ENST00000415380 PCDHGB5Q9Y5G0 923 aa18.33■□□□□ 0.53
SCARB1-203ENST00000415380 POLR2AP24928 1970 aaKnown RBP18.33■□□□□ 0.52
SCARB1-203ENST00000415380 ASB14A6NK59 587 aa18.33■□□□□ 0.52
SCARB1-203ENST00000415380 H3BRB1 525 aa18.33■□□□□ 0.52
SCARB1-203ENST00000415380 BEST1O76090 585 aa18.33■□□□□ 0.52
SCARB1-203ENST00000415380 RECQL4O94761 1208 aa18.33■□□□□ 0.52
SCARB1-203ENST00000415380 AKAP5P24588 427 aa18.33■□□□□ 0.52
SCARB1-203ENST00000415380 PPARGP37231 505 aaPredicted RBP18.33■□□□□ 0.52
SCARB1-203ENST00000415380 PKNOX1P55347 436 aa18.33■□□□□ 0.52
SCARB1-203ENST00000415380 LAMB3Q13751 1172 aa18.33■□□□□ 0.52
SCARB1-203ENST00000415380 ADGRE1Q14246 886 aa18.33■□□□□ 0.52
SCARB1-203ENST00000415380 CNGA3Q16281 694 aa18.33■□□□□ 0.52
SCARB1-203ENST00000415380 RARS2Q5T160 578 aaKnown RBP18.33■□□□□ 0.52
SCARB1-203ENST00000415380 TMEM198Q66K66 360 aa18.33■□□□□ 0.52
SCARB1-203ENST00000415380 ISLR2Q6UXK2 745 aa18.33■□□□□ 0.52
SCARB1-203ENST00000415380 CPSF7Q8N684 471 aaKnown RBP18.33■□□□□ 0.52
SCARB1-203ENST00000415380 C1QTNF1Q9BXJ1 281 aa18.33■□□□□ 0.52
SCARB1-203ENST00000415380 ZNF385DQ9H6B1 395 aa18.33■□□□□ 0.52
SCARB1-203ENST00000415380 TUT1Q9H6E5 874 aaKnown RBP18.33■□□□□ 0.52
SCARB1-203ENST00000415380 ZDHHC2Q9UIJ5 367 aa18.33■□□□□ 0.52
SCARB1-203ENST00000415380 RIMS3Q9UJD0 308 aa18.33■□□□□ 0.52
SCARB1-203ENST00000415380 VPS28Q9UK41 221 aa18.33■□□□□ 0.52
SCARB1-203ENST00000415380 STAP1Q9ULZ2 295 aa18.33■□□□□ 0.52
SCARB1-203ENST00000415380 OTOFQ9HC10 1997 aa18.32■□□□□ 0.52
SCARB1-203ENST00000415380 CLDN5O00501 218 aa18.32■□□□□ 0.52
SCARB1-203ENST00000415380 CFLARO15519 480 aa18.32■□□□□ 0.52
SCARB1-203ENST00000415380 CRTAMO95727 393 aa18.32■□□□□ 0.52
SCARB1-203ENST00000415380 APOA4P06727 396 aa18.32■□□□□ 0.52
SCARB1-203ENST00000415380 TPH1P17752 444 aa18.32■□□□□ 0.52
SCARB1-203ENST00000415380 TFEBP19484 476 aa18.32■□□□□ 0.52
SCARB1-203ENST00000415380 SAT1P21673 171 aa18.32■□□□□ 0.52
SCARB1-203ENST00000415380 MS4A2Q01362 244 aa18.32■□□□□ 0.52
SCARB1-203ENST00000415380 CEACAM7Q14002 265 aa18.32■□□□□ 0.52
SCARB1-203ENST00000415380 HFE2Q6ZVN8 426 aa18.32■□□□□ 0.52
SCARB1-203ENST00000415380 CATSPER4Q7RTX7 472 aa18.32■□□□□ 0.52
SCARB1-203ENST00000415380 APPL2Q8NEU8 664 aa18.32■□□□□ 0.52
SCARB1-203ENST00000415380 USP13Q92995 863 aaPredicted RBP18.32■□□□□ 0.52
SCARB1-203ENST00000415380 WNT8BQ93098 351 aa18.32■□□□□ 0.52
SCARB1-203ENST00000415380 NMD3Q96D46 503 aaKnown RBP18.32■□□□□ 0.52
SCARB1-203ENST00000415380 PRICKLE1Q96MT3 831 aaPredicted RBP18.32■□□□□ 0.52
SCARB1-203ENST00000415380 CATSPER2Q96P56 530 aa18.32■□□□□ 0.52
SCARB1-203ENST00000415380 EPAS1Q99814 870 aa18.32■□□□□ 0.52
SCARB1-203ENST00000415380 ANLNQ9NQW6 1124 aa18.32■□□□□ 0.52
SCARB1-203ENST00000415380 NDUFA13Q9P0J0 144 aa18.32■□□□□ 0.52
SCARB1-203ENST00000415380 UBQLN1Q9UMX0 589 aaKnown RBP18.32■□□□□ 0.52
SCARB1-203ENST00000415380 CSRP3P50461 194 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms