RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 SAP25Q8TEE9 199 aa19.74■□□□□ 0.75
CPSF7-204ENST00000413232 NT5C3BQ969T7 300 aa19.74■□□□□ 0.75
CPSF7-204ENST00000413232 TUBGCP2Q9BSJ2 902 aa19.74■□□□□ 0.75
CPSF7-204ENST00000413232 TKTL2Q9H0I9 626 aa19.74■□□□□ 0.75
CPSF7-204ENST00000413232 CLSTN2Q9H4D0 955 aa19.74■□□□□ 0.75
CPSF7-204ENST00000413232 CCDC86Q9H6F5 360 aaKnown RBP19.74■□□□□ 0.75
CPSF7-204ENST00000413232 SYNCQ9H7C4 482 aa19.74■□□□□ 0.75
CPSF7-204ENST00000413232 ASXL3Q9C0F0 2248 aa19.74■□□□□ 0.75
CPSF7-204ENST00000413232 CHD5Q8TDI0 1954 aa19.74■□□□□ 0.75
CPSF7-204ENST00000413232 ATRXP46100 2492 aa19.73■□□□□ 0.75
CPSF7-204ENST00000413232 K7ERQ8 282 aa19.73■□□□□ 0.75
CPSF7-204ENST00000413232 MCF2LO15068 1137 aa19.73■□□□□ 0.75
CPSF7-204ENST00000413232 DFNA5O60443 496 aa19.73■□□□□ 0.75
CPSF7-204ENST00000413232 CTSLP07711 333 aa19.73■□□□□ 0.75
CPSF7-204ENST00000413232 CYP11B1P15538 503 aa19.73■□□□□ 0.75
CPSF7-204ENST00000413232 CDH5P33151 784 aaPredicted RBP19.73■□□□□ 0.75
CPSF7-204ENST00000413232 OXCT1P55809 520 aa19.73■□□□□ 0.75
CPSF7-204ENST00000413232 CLDN6P56747 220 aa19.73■□□□□ 0.75
CPSF7-204ENST00000413232 TAS2R38P59533 333 aa19.73■□□□□ 0.75
CPSF7-204ENST00000413232 BNIP3Q12983 259 aa19.73■□□□□ 0.75
CPSF7-204ENST00000413232 CAMK2BQ13554 666 aa19.73■□□□□ 0.75
CPSF7-204ENST00000413232 TPD52L1Q16890 204 aaPredicted RBP19.73■□□□□ 0.75
CPSF7-204ENST00000413232 AGBL4Q5VU57 503 aa19.73■□□□□ 0.75
CPSF7-204ENST00000413232 LRSAM1Q6UWE0 723 aa19.73■□□□□ 0.75
CPSF7-204ENST00000413232 DHRS13Q6UX07 377 aa19.73■□□□□ 0.75
CPSF7-204ENST00000413232 PIP4K2CQ8TBX8 421 aa19.73■□□□□ 0.75
CPSF7-204ENST00000413232 OR8D1Q8WZ84 308 aa19.73■□□□□ 0.75
CPSF7-204ENST00000413232 TBCBQ99426 244 aa19.73■□□□□ 0.75
CPSF7-204ENST00000413232 WDCPQ9H6R7 721 aa19.73■□□□□ 0.75
CPSF7-204ENST00000413232 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.73■□□□□ 0.755e-9■■□□□ 12.4
CPSF7-204ENST00000413232 SLC25A13Q9UJS0 675 aa19.73■□□□□ 0.75
CPSF7-204ENST00000413232 VPS28Q9UK41 221 aa19.73■□□□□ 0.75
CPSF7-204ENST00000413232 LHX6Q9UPM6 363 aa19.73■□□□□ 0.75
CPSF7-204ENST00000413232 GPSM3Q9Y4H4 160 aa19.73■□□□□ 0.75
CPSF7-204ENST00000413232 A0A0D9SEW6 157 aa19.72■□□□□ 0.75
CPSF7-204ENST00000413232 TLR4O00206 839 aa19.72■□□□□ 0.75
CPSF7-204ENST00000413232 PLRG1O43660 514 aaKnown RBP19.72■□□□□ 0.75
CPSF7-204ENST00000413232 BNIP3LO60238 219 aa19.72■□□□□ 0.75
CPSF7-204ENST00000413232 CLDN11O75508 207 aa19.72■□□□□ 0.75
CPSF7-204ENST00000413232 SRCP12931 536 aa19.72■□□□□ 0.75
CPSF7-204ENST00000413232 PRKCSHP14314 528 aaPredicted RBP19.72■□□□□ 0.75
CPSF7-204ENST00000413232 GABRB2P47870 512 aa19.72■□□□□ 0.75
CPSF7-204ENST00000413232 SULT1E1P49888 294 aa19.72■□□□□ 0.75
CPSF7-204ENST00000413232 CDH4P55283 916 aa19.72■□□□□ 0.75
CPSF7-204ENST00000413232 NXPH1P58417 271 aa19.72■□□□□ 0.75
CPSF7-204ENST00000413232 DNAJC3Q13217 504 aa19.72■□□□□ 0.75
CPSF7-204ENST00000413232 RAPGEF1Q13905 1077 aa19.72■□□□□ 0.75
CPSF7-204ENST00000413232 SMAD1Q15797 465 aaKnown RBP19.72■□□□□ 0.75
CPSF7-204ENST00000413232 KLHDC7AQ5VTJ3 777 aa19.72■□□□□ 0.75
CPSF7-204ENST00000413232 TAF3Q5VWG9 929 aa19.72■□□□□ 0.75
CPSF7-204ENST00000413232 C19orf48Q6RUI8 117 aa19.72■□□□□ 0.75
CPSF7-204ENST00000413232 XYLT1Q86Y38 959 aa19.72■□□□□ 0.75
CPSF7-204ENST00000413232 NAA15Q9BXJ9 866 aaKnown RBP19.72■□□□□ 0.75
CPSF7-204ENST00000413232 CAAP1Q9H8G2 361 aa19.72■□□□□ 0.75
CPSF7-204ENST00000413232 SAMSN1Q9NSI8 373 aaKnown RBP19.72■□□□□ 0.75
CPSF7-204ENST00000413232 MPP6Q9NZW5 540 aa19.72■□□□□ 0.75
CPSF7-204ENST00000413232 FTSJ1Q9UET6 329 aa19.72■□□□□ 0.75
CPSF7-204ENST00000413232 CA5BQ9Y2D0 317 aa19.72■□□□□ 0.75
CPSF7-204ENST00000413232 TRABD2BA6NFA1 517 aa19.71■□□□□ 0.75
CPSF7-204ENST00000413232 DRGXA6NNA5 263 aa19.71■□□□□ 0.75
CPSF7-204ENST00000413232 SMAD6O43541 496 aaKnown RBP19.71■□□□□ 0.75
CPSF7-204ENST00000413232 GLDCP23378 1020 aa19.71■□□□□ 0.75
CPSF7-204ENST00000413232 FLT3P36888 993 aa19.71■□□□□ 0.75
CPSF7-204ENST00000413232 SMYD5Q6GMV2 418 aa19.71■□□□□ 0.75
CPSF7-204ENST00000413232 NOP9Q86U38 636 aaKnown RBP19.71■□□□□ 0.75
CPSF7-204ENST00000413232 TMEM35BQ8NCS4 154 aa19.71■□□□□ 0.75
CPSF7-204ENST00000413232 C18orf8Q96DM3 657 aa19.71■□□□□ 0.75
CPSF7-204ENST00000413232 PGAP3Q96FM1 320 aaPredicted RBP19.71■□□□□ 0.75
CPSF7-204ENST00000413232 MUC3BQ9H195 1237 aa19.71■□□□□ 0.75
CPSF7-204ENST00000413232 GDF3Q9NR23 364 aa19.71■□□□□ 0.75
CPSF7-204ENST00000413232 VPS51Q9UID3 782 aa19.71■□□□□ 0.75
CPSF7-204ENST00000413232 HS3ST2Q9Y278 367 aa19.71■□□□□ 0.75
CPSF7-204ENST00000413232 SLC7A4O43246 635 aa19.7■□□□□ 0.74
CPSF7-204ENST00000413232 ITGAVP06756 1048 aa19.7■□□□□ 0.74
CPSF7-204ENST00000413232 RRM1P23921 792 aa19.7■□□□□ 0.74
CPSF7-204ENST00000413232 EPHA8P29322 1005 aaPredicted RBP19.7■□□□□ 0.74
CPSF7-204ENST00000413232 DEUP1Q05D60 604 aa19.7■□□□□ 0.74
CPSF7-204ENST00000413232 RAB6CQ53S08 254 aa19.7■□□□□ 0.74
CPSF7-204ENST00000413232 BRMS1LQ5PSV4 323 aa19.7■□□□□ 0.74
CPSF7-204ENST00000413232 FAM102AQ5T9C2 384 aaPredicted RBP19.7■□□□□ 0.74
CPSF7-204ENST00000413232 PIP5KL1Q5T9C9 394 aa19.7■□□□□ 0.74
CPSF7-204ENST00000413232 NAPEPLDQ6IQ20 393 aa19.7■□□□□ 0.74
CPSF7-204ENST00000413232 LINGO4Q6UY18 593 aa19.7■□□□□ 0.74
CPSF7-204ENST00000413232 KANSL1Q7Z3B3 1105 aa19.7■□□□□ 0.74
CPSF7-204ENST00000413232 BNIPLQ7Z465 357 aa19.7■□□□□ 0.74
CPSF7-204ENST00000413232 TFAP2DQ7Z6R9 452 aa19.7■□□□□ 0.74
CPSF7-204ENST00000413232 DSG4Q86SJ6 1040 aa19.7■□□□□ 0.74
CPSF7-204ENST00000413232 PRPF39Q86UA1 669 aaKnown RBP19.7■□□□□ 0.74
CPSF7-204ENST00000413232 ZDHHC17Q8IUH5 632 aa19.7■□□□□ 0.74
CPSF7-204ENST00000413232 EID2Q8N6I1 236 aa19.7■□□□□ 0.74
CPSF7-204ENST00000413232 MFSD2AQ8NA29 543 aa19.7■□□□□ 0.74
CPSF7-204ENST00000413232 OR2A12Q8NGT7 310 aa19.7■□□□□ 0.74
CPSF7-204ENST00000413232 SKA1Q96BD8 255 aa19.7■□□□□ 0.74
CPSF7-204ENST00000413232 PPP1R9BQ96SB3 815 aa19.7■□□□□ 0.74
CPSF7-204ENST00000413232 RAB6CQ9H0N0 254 aa19.7■□□□□ 0.74
CPSF7-204ENST00000413232 KDM4CQ9H3R0 1056 aa19.7■□□□□ 0.74
CPSF7-204ENST00000413232 RRN3Q9NYV6 651 aa19.7■□□□□ 0.74
CPSF7-204ENST00000413232 ZNF212Q9UDV6 495 aa19.7■□□□□ 0.74
CPSF7-204ENST00000413232 RAXQ9Y2V3 346 aa19.7■□□□□ 0.74
CPSF7-204ENST00000413232 IGLV3-10A0A075B6K4 115 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms