RNA–Protein interactions for RNA: ENST00000412899.5

ITGA6-204, Transcript of integrin subunit alpha 6, humanhuman

TSL 1 (best)

Gene ITGA6, Length 970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-204ENST00000412899 STAT4Q14765 748 aa19.18■□□□□ 0.66
ITGA6-204ENST00000412899 KLHL40Q2TBA0 621 aa19.18■□□□□ 0.66
ITGA6-204ENST00000412899 ANO6Q4KMQ2 910 aa19.18■□□□□ 0.66
ITGA6-204ENST00000412899 EFHC1Q5JVL4 640 aa19.18■□□□□ 0.66
ITGA6-204ENST00000412899 CXorf57Q6NSI4 855 aaKnown RBP19.18■□□□□ 0.66
ITGA6-204ENST00000412899 FBXL22Q6P050 247 aa19.18■□□□□ 0.66
ITGA6-204ENST00000412899 ANKRD20A12PQ8NF67 263 aa19.18■□□□□ 0.66
ITGA6-204ENST00000412899 SHC3Q92529 594 aa19.18■□□□□ 0.66
ITGA6-204ENST00000412899 SARDHQ9UL12 918 aa19.18■□□□□ 0.66
ITGA6-204ENST00000412899 BAHCC1Q9P281 2608 aa19.18■□□□□ 0.66
ITGA6-204ENST00000412899 GOLGA4Q13439 2230 aaKnown RBP19.17■□□□□ 0.66
ITGA6-204ENST00000412899 ANKRD11Q6UB99 2663 aaPredicted RBP19.17■□□□□ 0.66
ITGA6-204ENST00000412899 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.17■□□□□ 0.66
ITGA6-204ENST00000412899 EIF4E1BA6NMX2 242 aaKnown RBP19.17■□□□□ 0.66
ITGA6-204ENST00000412899 BECN2A8MW95 431 aa19.17■□□□□ 0.66
ITGA6-204ENST00000412899 C1QTNF3-AMACRE9PGA6 284 aa19.17■□□□□ 0.66
ITGA6-204ENST00000412899 PLRG1O43660 514 aaKnown RBP19.17■□□□□ 0.66
ITGA6-204ENST00000412899 BNIP3LO60238 219 aa19.17■□□□□ 0.66
ITGA6-204ENST00000412899 GRAP2O75791 330 aa19.17■□□□□ 0.66
ITGA6-204ENST00000412899 GLI1P08151 1106 aa19.17■□□□□ 0.66
ITGA6-204ENST00000412899 NUDT1P36639 197 aa19.17■□□□□ 0.66
ITGA6-204ENST00000412899 RXRGP48443 463 aa19.17■□□□□ 0.66
ITGA6-204ENST00000412899 CENPCQ03188 943 aa19.17■□□□□ 0.66
ITGA6-204ENST00000412899 ZNF177Q13360 481 aaPredicted RBP19.17■□□□□ 0.66
ITGA6-204ENST00000412899 POM121L1PQ3SYA9 428 aa19.17■□□□□ 0.66
ITGA6-204ENST00000412899 SPATS2Q86XZ4 545 aaKnown RBP19.17■□□□□ 0.66
ITGA6-204ENST00000412899 AOPEPQ8N6M6 819 aa19.17■□□□□ 0.66
ITGA6-204ENST00000412899 FAM131CQ96AQ9 280 aa19.17■□□□□ 0.66
ITGA6-204ENST00000412899 PPP1R13BQ96KQ4 1090 aa19.17■□□□□ 0.66
ITGA6-204ENST00000412899 SLC2A13Q96QE2 648 aa19.17■□□□□ 0.66
ITGA6-204ENST00000412899 CPXM1Q96SM3 734 aa19.17■□□□□ 0.66
ITGA6-204ENST00000412899 ARHGAP20Q9P2F6 1191 aa19.17■□□□□ 0.66
ITGA6-204ENST00000412899 VPS28Q9UK41 221 aa19.17■□□□□ 0.66
ITGA6-204ENST00000412899 AJAP1Q9UKB5 411 aaPredicted RBP19.17■□□□□ 0.66
ITGA6-204ENST00000412899 VANGL2Q9ULK5 521 aa19.17■□□□□ 0.66
ITGA6-204ENST00000412899 DMTF1Q9Y222 760 aa19.17■□□□□ 0.66
ITGA6-204ENST00000412899 AK5Q9Y6K8 562 aa19.17■□□□□ 0.66
ITGA6-204ENST00000412899 NYNRINQ9P2P1 1898 aaKnown RBP19.17■□□□□ 0.66
ITGA6-204ENST00000412899 ACACAQ13085 2346 aa19.16■□□□□ 0.66
ITGA6-204ENST00000412899 ATP9BO43861 1147 aa19.16■□□□□ 0.66
ITGA6-204ENST00000412899 HSF2BPO75031 334 aa19.16■□□□□ 0.66
ITGA6-204ENST00000412899 ABCG1P45844 678 aa19.16■□□□□ 0.66
ITGA6-204ENST00000412899 VASPP50552 380 aaPredicted RBP19.16■□□□□ 0.66
ITGA6-204ENST00000412899 CNTN1Q12860 1018 aa19.16■□□□□ 0.66
ITGA6-204ENST00000412899 OVGP1Q12889 678 aa19.16■□□□□ 0.66
ITGA6-204ENST00000412899 TARDBPQ13148 414 aaKnown RBP eCLIP19.16■□□□□ 0.66
ITGA6-204ENST00000412899 NME3Q13232 169 aa19.16■□□□□ 0.66
ITGA6-204ENST00000412899 MTA1Q13330 715 aa19.16■□□□□ 0.66
ITGA6-204ENST00000412899 AUHQ13825 339 aaKnown RBP19.16■□□□□ 0.66
ITGA6-204ENST00000412899 RAPGEF1Q13905 1077 aa19.16■□□□□ 0.66
ITGA6-204ENST00000412899 DLG2Q15700 870 aa19.16■□□□□ 0.66
ITGA6-204ENST00000412899 FKBP15Q5T1M5 1219 aa19.16■□□□□ 0.66
ITGA6-204ENST00000412899 HES3Q5TGS1 186 aa19.16■□□□□ 0.66
ITGA6-204ENST00000412899 KLHDC7AQ5VTJ3 777 aa19.16■□□□□ 0.66
ITGA6-204ENST00000412899 DPY19L2P1Q6NXN4 242 aa19.16■□□□□ 0.66
ITGA6-204ENST00000412899 Q6ZVU0 165 aa19.16■□□□□ 0.66
ITGA6-204ENST00000412899 IQCHQ86VS3 1027 aa19.16■□□□□ 0.66
ITGA6-204ENST00000412899 PASD1Q8IV76 773 aa19.16■□□□□ 0.66
ITGA6-204ENST00000412899 PIP4K2CQ8TBX8 421 aa19.16■□□□□ 0.66
ITGA6-204ENST00000412899 TSC1Q92574 1164 aa19.16■□□□□ 0.66
ITGA6-204ENST00000412899 ALG14Q96F25 216 aa19.16■□□□□ 0.66
ITGA6-204ENST00000412899 FEM1AQ9BSK4 669 aa19.16■□□□□ 0.66
ITGA6-204ENST00000412899 ASNSD1Q9NWL6 643 aa19.16■□□□□ 0.66
ITGA6-204ENST00000412899 PPM1HQ9ULR3 514 aa19.16■□□□□ 0.66
ITGA6-204ENST00000412899 DSPP15924 2871 aaKnown RBP19.15■□□□□ 0.66
ITGA6-204ENST00000412899 URB1O60287 2271 aaKnown RBP19.15■□□□□ 0.66
ITGA6-204ENST00000412899 FOXN3O00409 490 aaPredicted RBP19.15■□□□□ 0.66
ITGA6-204ENST00000412899 MCF2LO15068 1137 aa19.15■□□□□ 0.66
ITGA6-204ENST00000412899 ALOX15BO15296 676 aa19.15■□□□□ 0.66
ITGA6-204ENST00000412899 SEMG2Q02383 582 aa19.15■□□□□ 0.66
ITGA6-204ENST00000412899 PTK2Q05397 1052 aa19.15■□□□□ 0.66
ITGA6-204ENST00000412899 NCAPHQ15003 741 aa19.15■□□□□ 0.66
ITGA6-204ENST00000412899 SETMARQ53H47 684 aaPredicted RBP19.15■□□□□ 0.66
ITGA6-204ENST00000412899 AGBL4Q5VU57 503 aa19.15■□□□□ 0.66
ITGA6-204ENST00000412899 SFMBT2Q5VUG0 894 aa19.15■□□□□ 0.66
ITGA6-204ENST00000412899 OR6B2Q6IFH4 312 aa19.15■□□□□ 0.66
ITGA6-204ENST00000412899 TRIM69Q86WT6 500 aa19.15■□□□□ 0.66
ITGA6-204ENST00000412899 WDTC1Q8N5D0 677 aa19.15■□□□□ 0.66
ITGA6-204ENST00000412899 OR52K2Q8NGK3 314 aa19.15■□□□□ 0.66
ITGA6-204ENST00000412899 CRELD1Q96HD1 420 aa19.15■□□□□ 0.66
ITGA6-204ENST00000412899 NOX5Q96PH1 765 aa19.15■□□□□ 0.66
ITGA6-204ENST00000412899 LIMA1Q9UHB6 759 aaKnown RBP19.15■□□□□ 0.66
ITGA6-204ENST00000412899 APC2O95996 2303 aa19.15■□□□□ 0.66
ITGA6-204ENST00000412899 PRAMEF26H0Y7S4 382 aa19.14■□□□□ 0.65
ITGA6-204ENST00000412899 SDC3O75056 442 aa19.14■□□□□ 0.65
ITGA6-204ENST00000412899 CLDN11O75508 207 aa19.14■□□□□ 0.65
ITGA6-204ENST00000412899 CKMT2P17540 419 aa19.14■□□□□ 0.65
ITGA6-204ENST00000412899 GGCXP38435 758 aa19.14■□□□□ 0.65
ITGA6-204ENST00000412899 IRAK1P51617 712 aa19.14■□□□□ 0.65
ITGA6-204ENST00000412899 COPB1P53618 953 aaKnown RBP19.14■□□□□ 0.65
ITGA6-204ENST00000412899 SNX16P57768 344 aa19.14■□□□□ 0.65
ITGA6-204ENST00000412899 ILKQ13418 452 aa19.14■□□□□ 0.65
ITGA6-204ENST00000412899 DRAP1Q14919 205 aaPredicted RBP19.14■□□□□ 0.65
ITGA6-204ENST00000412899 SMYD5Q6GMV2 418 aa19.14■□□□□ 0.65
ITGA6-204ENST00000412899 FBXL19Q6PCT2 694 aa19.14■□□□□ 0.65
ITGA6-204ENST00000412899 FAM183BPQ6ZVS7 135 aa19.14■□□□□ 0.65
ITGA6-204ENST00000412899 SH2D3CQ8N5H7 860 aa19.14■□□□□ 0.65
ITGA6-204ENST00000412899 BBC3Q96PG8 261 aaPredicted RBP19.14■□□□□ 0.65
ITGA6-204ENST00000412899 BPIFA3Q9BQP9 254 aa19.14■□□□□ 0.65
ITGA6-204ENST00000412899 SIK2Q9H0K1 926 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms