RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 YBX3P16989 372 aaKnown RBP eCLIP10.05□□□□□ -0.81e-6■□□□□ 10.8
MSH2-202ENST00000406134 GARSP41250 739 aaKnown RBP10.05□□□□□ -0.8
MSH2-202ENST00000406134 TKTL1P51854 596 aa10.05□□□□□ -0.8
MSH2-202ENST00000406134 MTTPP55157 894 aa10.05□□□□□ -0.8
MSH2-202ENST00000406134 KBTBD6Q86V97 674 aa10.05□□□□□ -0.8
MSH2-202ENST00000406134 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.05□□□□□ -0.8
MSH2-202ENST00000406134 FAM149B1Q96BN6 582 aa10.05□□□□□ -0.8
MSH2-202ENST00000406134 PCED1BQ96HM7 432 aa10.05□□□□□ -0.8
MSH2-202ENST00000406134 ZNF560Q96MR9 790 aa10.05□□□□□ -0.8
MSH2-202ENST00000406134 DDX50Q9BQ39 737 aaKnown RBP10.05□□□□□ -0.8
MSH2-202ENST00000406134 NAT9Q9BTE0 207 aa10.05□□□□□ -0.8
MSH2-202ENST00000406134 YIPF3Q9GZM5 350 aa10.05□□□□□ -0.8
MSH2-202ENST00000406134 SNX25Q9H3E2 840 aa10.05□□□□□ -0.8
MSH2-202ENST00000406134 OXSMQ9NWU1 459 aa10.05□□□□□ -0.8
MSH2-202ENST00000406134 PCDHGB4Q9UN71 923 aa10.05□□□□□ -0.8
MSH2-202ENST00000406134 PCDHGB5Q9Y5G0 923 aa10.05□□□□□ -0.8
MSH2-202ENST00000406134 GOLGA8TH3BQL2 631 aa10.04□□□□□ -0.8
MSH2-202ENST00000406134 CAPN15O75808 1086 aa10.04□□□□□ -0.8
MSH2-202ENST00000406134 ZNF865P0CJ78 1059 aaPredicted RBP10.04□□□□□ -0.8
MSH2-202ENST00000406134 CYP2C9P11712 490 aa10.04□□□□□ -0.8
MSH2-202ENST00000406134 CPA3P15088 417 aa10.04□□□□□ -0.8
MSH2-202ENST00000406134 NFKB1P19838 968 aa10.04□□□□□ -0.8
MSH2-202ENST00000406134 GRK2P25098 689 aa10.04□□□□□ -0.8
MSH2-202ENST00000406134 HCAR3P49019 387 aa10.04□□□□□ -0.8
MSH2-202ENST00000406134 CCDC153Q494R4 210 aa10.04□□□□□ -0.8
MSH2-202ENST00000406134 SV2CQ496J9 727 aa10.04□□□□□ -0.8
MSH2-202ENST00000406134 HSP90AA5PQ58FG0 334 aa10.04□□□□□ -0.8
MSH2-202ENST00000406134 LPCAT4Q643R3 524 aa10.04□□□□□ -0.8
MSH2-202ENST00000406134 PM20D1Q6GTS8 502 aa10.04□□□□□ -0.8
MSH2-202ENST00000406134 HMGCLL1Q8TB92 370 aa10.04□□□□□ -0.8
MSH2-202ENST00000406134 APOL2Q9BQE5 337 aa10.04□□□□□ -0.8
MSH2-202ENST00000406134 GATA5Q9BWX5 397 aaPredicted RBP10.04□□□□□ -0.8
MSH2-202ENST00000406134 SLC45A1Q9Y2W3 748 aa10.04□□□□□ -0.8
MSH2-202ENST00000406134 LAMA3Q16787 3333 aa10.04□□□□□ -0.8
MSH2-202ENST00000406134 PLXNA4Q9HCM2 1894 aa10.04□□□□□ -0.8
MSH2-202ENST00000406134 RRN3P2A6NIE6 340 aa10.04□□□□□ -0.8
MSH2-202ENST00000406134 CASQ2O14958 399 aaPredicted RBP10.04□□□□□ -0.8
MSH2-202ENST00000406134 FBXO21O94952 628 aa10.04□□□□□ -0.8
MSH2-202ENST00000406134 C2P06681 752 aa10.04□□□□□ -0.8
MSH2-202ENST00000406134 LYNP07948 512 aa10.04□□□□□ -0.8
MSH2-202ENST00000406134 ARSAP15289 507 aa10.04□□□□□ -0.8
MSH2-202ENST00000406134 MPSTP25325 297 aa10.04□□□□□ -0.8
MSH2-202ENST00000406134 PNPLA4P41247 253 aa10.04□□□□□ -0.8
MSH2-202ENST00000406134 ARCN1P48444 511 aaKnown RBP10.04□□□□□ -0.8
MSH2-202ENST00000406134 SERPINB8P50452 374 aa10.04□□□□□ -0.8
MSH2-202ENST00000406134 GRM3Q14832 879 aa10.04□□□□□ -0.8
MSH2-202ENST00000406134 PCBP1Q15365 356 aaKnown RBP eCLIP10.04□□□□□ -0.8
MSH2-202ENST00000406134 C1orf146Q5VVC0 180 aa10.04□□□□□ -0.8
MSH2-202ENST00000406134 ARHGAP12Q8IWW6 846 aa10.04□□□□□ -0.8
MSH2-202ENST00000406134 CCNYQ8ND76 341 aa10.04□□□□□ -0.8
MSH2-202ENST00000406134 URGCPQ8TCY9 931 aa10.04□□□□□ -0.8
MSH2-202ENST00000406134 GPR22Q99680 433 aa10.04□□□□□ -0.8
MSH2-202ENST00000406134 A0A096LPK6 155 aa10.03□□□□□ -0.8
MSH2-202ENST00000406134 MATN2O00339 956 aa10.03□□□□□ -0.8
MSH2-202ENST00000406134 PPP1R12AO14974 1030 aaPredicted RBP10.03□□□□□ -0.8
MSH2-202ENST00000406134 DCXO43602 365 aa10.03□□□□□ -0.8
MSH2-202ENST00000406134 FESP07332 822 aa10.03□□□□□ -0.8
MSH2-202ENST00000406134 USP17L7P0C7H9 530 aa10.03□□□□□ -0.8
MSH2-202ENST00000406134 PEX2P28328 305 aa10.03□□□□□ -0.8
MSH2-202ENST00000406134 TYK2P29597 1187 aa10.03□□□□□ -0.8
MSH2-202ENST00000406134 AXLP30530 894 aa10.03□□□□□ -0.8
MSH2-202ENST00000406134 COPAP53621 1224 aa10.03□□□□□ -0.8
MSH2-202ENST00000406134 SNX16P57768 344 aa10.03□□□□□ -0.8
MSH2-202ENST00000406134 IHHQ14623 411 aa10.03□□□□□ -0.8
MSH2-202ENST00000406134 CCDC6Q16204 474 aa10.03□□□□□ -0.8
MSH2-202ENST00000406134 AAGABQ6PD74 315 aa10.03□□□□□ -0.8
MSH2-202ENST00000406134 PID1Q7Z2X4 250 aa10.03□□□□□ -0.8
MSH2-202ENST00000406134 DHDDSQ86SQ9 333 aa10.03□□□□□ -0.8
MSH2-202ENST00000406134 FAM35AQ86V20 835 aa10.03□□□□□ -0.8
MSH2-202ENST00000406134 ZC3HC1Q86WB0 502 aaKnown RBP10.03□□□□□ -0.8
MSH2-202ENST00000406134 CEP97Q8IW35 865 aa10.03□□□□□ -0.8
MSH2-202ENST00000406134 CNTN4Q8IWV2 1026 aa10.03□□□□□ -0.8
MSH2-202ENST00000406134 CNDP1Q96KN2 507 aa10.03□□□□□ -0.8
MSH2-202ENST00000406134 ABHD16BQ9H3Z7 469 aa10.03□□□□□ -0.8
MSH2-202ENST00000406134 LRRC40Q9H9A6 602 aa10.03□□□□□ -0.8
MSH2-202ENST00000406134 CSNK1G1Q9HCP0 422 aa10.03□□□□□ -0.8
MSH2-202ENST00000406134 TNFRSF12AQ9NP84 129 aa10.03□□□□□ -0.8
MSH2-202ENST00000406134 RNF181Q9P0P0 153 aa10.03□□□□□ -0.8
MSH2-202ENST00000406134 STRNO43815 780 aa10.03□□□□□ -0.8
MSH2-202ENST00000406134 PGK1P00558 417 aa10.03□□□□□ -0.8
MSH2-202ENST00000406134 TPH1P17752 444 aa10.03□□□□□ -0.8
MSH2-202ENST00000406134 CXCR3P49682 368 aa10.03□□□□□ -0.8
MSH2-202ENST00000406134 AQP4P55087 323 aa10.03□□□□□ -0.8
MSH2-202ENST00000406134 DSG1Q02413 1049 aa10.03□□□□□ -0.8
MSH2-202ENST00000406134 KLF10Q13118 480 aa10.03□□□□□ -0.8
MSH2-202ENST00000406134 GRM2Q14416 872 aa10.03□□□□□ -0.8
MSH2-202ENST00000406134 ZNF460Q14592 562 aa10.03□□□□□ -0.8
MSH2-202ENST00000406134 MFSD10Q14728 455 aa10.03□□□□□ -0.8
MSH2-202ENST00000406134 IQSEC1Q6DN90 963 aa10.03□□□□□ -0.8
MSH2-202ENST00000406134 OTOP3Q7RTS5 596 aa10.03□□□□□ -0.8
MSH2-202ENST00000406134 LMNTD2Q8IXW0 634 aa10.03□□□□□ -0.8
MSH2-202ENST00000406134 CDKL2Q92772 493 aa10.03□□□□□ -0.8
MSH2-202ENST00000406134 STMN2Q93045 179 aa10.03□□□□□ -0.8
MSH2-202ENST00000406134 NDFIP2Q9NV92 336 aa10.03□□□□□ -0.8
MSH2-202ENST00000406134 LAMA2P24043 3122 aaKnown RBP10.03□□□□□ -0.8
MSH2-202ENST00000406134 E9PBE3 544 aa10.03□□□□□ -0.8
MSH2-202ENST00000406134 MAP3K7O43318 606 aa10.03□□□□□ -0.8
MSH2-202ENST00000406134 KLHL41O60662 606 aa10.03□□□□□ -0.8
MSH2-202ENST00000406134 LRIG2O94898 1065 aa10.03□□□□□ -0.8
MSH2-202ENST00000406134 KLHL2O95198 593 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms