RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 USP10Q14694 798 aaKnown RBP9.75□□□□□ -0.85
SMC1B-202ENST00000404354 STXBP2Q15833 593 aa9.75□□□□□ -0.85
SMC1B-202ENST00000404354 SLC44A4Q53GD3 710 aa9.75□□□□□ -0.85
SMC1B-202ENST00000404354 GJC2Q5T442 439 aaPredicted RBP9.75□□□□□ -0.85
SMC1B-202ENST00000404354 POTEHQ6S545 545 aa9.75□□□□□ -0.85
SMC1B-202ENST00000404354 MCUQ8NE86 351 aa9.75□□□□□ -0.85
SMC1B-202ENST00000404354 RDM1Q8NG50 284 aa9.75□□□□□ -0.85
SMC1B-202ENST00000404354 ZFRQ96KR1 1074 aaKnown RBP9.75□□□□□ -0.85
SMC1B-202ENST00000404354 DEFB129Q9H1M3 183 aa9.75□□□□□ -0.85
SMC1B-202ENST00000404354 PIF1Q9H611 641 aa9.75□□□□□ -0.85
SMC1B-202ENST00000404354 TRPC7Q9HCX4 862 aa9.75□□□□□ -0.85
SMC1B-202ENST00000404354 PFDN4Q9NQP4 134 aa9.75□□□□□ -0.85
SMC1B-202ENST00000404354 RAB26Q9ULW5 256 aa9.75□□□□□ -0.85
SMC1B-202ENST00000404354 AP4S1Q9Y587 144 aa9.75□□□□□ -0.85
SMC1B-202ENST00000404354 MAFBQ9Y5Q3 323 aaPredicted RBP9.75□□□□□ -0.85
SMC1B-202ENST00000404354 PFKMP08237 780 aa9.74□□□□□ -0.85
SMC1B-202ENST00000404354 IMPDH2P12268 514 aa9.74□□□□□ -0.85
SMC1B-202ENST00000404354 XIAPP98170 497 aa9.74□□□□□ -0.85
SMC1B-202ENST00000404354 CTBP1Q13363 440 aa9.74□□□□□ -0.85
SMC1B-202ENST00000404354 PDK2Q15119 407 aa9.74□□□□□ -0.85
SMC1B-202ENST00000404354 TREML2Q5T2D2 321 aa9.74□□□□□ -0.85
SMC1B-202ENST00000404354 MPZL3Q6UWV2 235 aa9.74□□□□□ -0.85
SMC1B-202ENST00000404354 UTS2BQ765I0 119 aa9.74□□□□□ -0.85
SMC1B-202ENST00000404354 AHI1Q8N157 1196 aa9.74□□□□□ -0.85
SMC1B-202ENST00000404354 LPGAT1Q92604 370 aa9.74□□□□□ -0.85
SMC1B-202ENST00000404354 GCOM2Q9BZD3 368 aaPredicted RBP9.74□□□□□ -0.85
SMC1B-202ENST00000404354 NAA50Q9GZZ1 169 aaKnown RBP9.74□□□□□ -0.85
SMC1B-202ENST00000404354 TLK1Q9UKI8 766 aa9.74□□□□□ -0.85
SMC1B-202ENST00000404354 COPG1Q9Y678 874 aaKnown RBP9.74□□□□□ -0.85
SMC1B-202ENST00000404354 KIAA1217Q5T5P2 1943 aa9.74□□□□□ -0.85
SMC1B-202ENST00000404354 BPTFQ12830 3046 aa9.74□□□□□ -0.85
SMC1B-202ENST00000404354 HDAC3O15379 428 aa9.74□□□□□ -0.85
SMC1B-202ENST00000404354 GARSP41250 739 aaKnown RBP9.74□□□□□ -0.85
SMC1B-202ENST00000404354 MAGEA3P43357 314 aa9.74□□□□□ -0.85
SMC1B-202ENST00000404354 RPL14P50914 215 aaKnown RBP9.74□□□□□ -0.85
SMC1B-202ENST00000404354 CSE1LP55060 971 aaKnown RBP9.74□□□□□ -0.85
SMC1B-202ENST00000404354 PRPSAP1Q14558 356 aa9.74□□□□□ -0.85
SMC1B-202ENST00000404354 GRM3Q14832 879 aa9.74□□□□□ -0.85
SMC1B-202ENST00000404354 AGKQ53H12 422 aa9.74□□□□□ -0.85
SMC1B-202ENST00000404354 LDLRAP1Q5SW96 308 aa9.74□□□□□ -0.85
SMC1B-202ENST00000404354 GPR107Q5VW38 600 aa9.74□□□□□ -0.85
SMC1B-202ENST00000404354 NCBP2-AS2Q69YL0 99 aa9.74□□□□□ -0.85
SMC1B-202ENST00000404354 ZBTB49Q6ZSB9 765 aa9.74□□□□□ -0.85
SMC1B-202ENST00000404354 HERC6Q8IVU3 1022 aa9.74□□□□□ -0.85
SMC1B-202ENST00000404354 ZNF567Q8N184 647 aa9.74□□□□□ -0.85
SMC1B-202ENST00000404354 LPAR1Q92633 364 aa9.74□□□□□ -0.85
SMC1B-202ENST00000404354 KHSRPQ92945 711 aaKnown RBP eCLIP9.74□□□□□ -0.85
SMC1B-202ENST00000404354 LRRC39Q96DD0 335 aa9.74□□□□□ -0.85
SMC1B-202ENST00000404354 TBCBQ99426 244 aa9.74□□□□□ -0.85
SMC1B-202ENST00000404354 ATXN3LQ9H3M9 355 aa9.74□□□□□ -0.85
SMC1B-202ENST00000404354 EFCAB1Q9HAE3 211 aa9.74□□□□□ -0.85
SMC1B-202ENST00000404354 GIMAP2Q9UG22 337 aa9.74□□□□□ -0.85
SMC1B-202ENST00000404354 GIPC1O14908 333 aa9.74□□□□□ -0.85
SMC1B-202ENST00000404354 GCATO75600 419 aa9.74□□□□□ -0.85
SMC1B-202ENST00000404354 ZNF189O75820 626 aaPredicted RBP9.74□□□□□ -0.85
SMC1B-202ENST00000404354 PIGRP01833 764 aa9.74□□□□□ -0.85
SMC1B-202ENST00000404354 PGK2P07205 417 aa9.74□□□□□ -0.85
SMC1B-202ENST00000404354 FAM163BP0C2L3 166 aa9.74□□□□□ -0.85
SMC1B-202ENST00000404354 ZNF26P17031 533 aaPredicted RBP9.74□□□□□ -0.85
SMC1B-202ENST00000404354 GLDCP23378 1020 aa9.74□□□□□ -0.85
SMC1B-202ENST00000404354 NEDD8Q15843 81 aa9.74□□□□□ -0.85
SMC1B-202ENST00000404354 DCAF6Q58WW2 860 aa9.74□□□□□ -0.85
SMC1B-202ENST00000404354 ZPBP2Q6X784 338 aa9.74□□□□□ -0.85
SMC1B-202ENST00000404354 ZNF554Q86TJ5 538 aa9.74□□□□□ -0.85
SMC1B-202ENST00000404354 NT5DC4Q86YG4 428 aa9.74□□□□□ -0.85
SMC1B-202ENST00000404354 SLC41A1Q8IVJ1 513 aa9.74□□□□□ -0.85
SMC1B-202ENST00000404354 CYGBQ8WWM9 190 aa9.74□□□□□ -0.85
SMC1B-202ENST00000404354 HESX1Q9UBX0 185 aa9.74□□□□□ -0.85
SMC1B-202ENST00000404354 ZNF214Q9UL59 606 aaPredicted RBP9.74□□□□□ -0.85
SMC1B-202ENST00000404354 A0A0A0MRY4 1105 aa9.73□□□□□ -0.85
SMC1B-202ENST00000404354 A0A1W2PPW3 197 aa9.73□□□□□ -0.85
SMC1B-202ENST00000404354 GRID2O43424 1007 aa9.73□□□□□ -0.85
SMC1B-202ENST00000404354 VTNP04004 478 aa9.73□□□□□ -0.85
SMC1B-202ENST00000404354 VDRP11473 427 aa9.73□□□□□ -0.85
SMC1B-202ENST00000404354 PGAM1P18669 254 aa9.73□□□□□ -0.85
SMC1B-202ENST00000404354 ARL4AP40617 200 aa9.73□□□□□ -0.85
SMC1B-202ENST00000404354 GRIA3P42263 894 aa9.73□□□□□ -0.85
SMC1B-202ENST00000404354 PSME3P61289 254 aa9.73□□□□□ -0.85
SMC1B-202ENST00000404354 CTBSQ01459 385 aa9.73□□□□□ -0.85
SMC1B-202ENST00000404354 CD300CQ08708 224 aa9.73□□□□□ -0.85
SMC1B-202ENST00000404354 IKBKEQ14164 716 aa9.73□□□□□ -0.85
SMC1B-202ENST00000404354 OLFML1Q6UWY5 402 aa9.73□□□□□ -0.85
SMC1B-202ENST00000404354 TIFABQ6ZNK6 161 aa9.73□□□□□ -0.85
SMC1B-202ENST00000404354 ADCY4Q8NFM4 1077 aa9.73□□□□□ -0.85
SMC1B-202ENST00000404354 EXT2Q93063 718 aa9.73□□□□□ -0.85
SMC1B-202ENST00000404354 PHF21BQ96EK2 531 aa9.73□□□□□ -0.85
SMC1B-202ENST00000404354 THAP11Q96EK4 314 aa9.73□□□□□ -0.85
SMC1B-202ENST00000404354 RMND5BQ96G75 393 aaPredicted RBP9.73□□□□□ -0.85
SMC1B-202ENST00000404354 SPATA13Q96N96 652 aa9.73□□□□□ -0.85
SMC1B-202ENST00000404354 NT5C1AQ9BXI3 368 aa9.73□□□□□ -0.85
SMC1B-202ENST00000404354 MKS1Q9NXB0 559 aa9.73□□□□□ -0.85
SMC1B-202ENST00000404354 CDYLQ9Y232 598 aa9.73□□□□□ -0.85
SMC1B-202ENST00000404354 SNX10Q9Y5X0 201 aa9.73□□□□□ -0.85
SMC1B-202ENST00000404354 MATN2O00339 956 aa9.73□□□□□ -0.85
SMC1B-202ENST00000404354 SPRP35270 261 aaPredicted RBP9.73□□□□□ -0.85
SMC1B-202ENST00000404354 PPARGP37231 505 aaPredicted RBP9.73□□□□□ -0.85
SMC1B-202ENST00000404354 SLC6A3Q01959 620 aa9.73□□□□□ -0.85
SMC1B-202ENST00000404354 SEMA5AQ13591 1074 aa9.73□□□□□ -0.85
SMC1B-202ENST00000404354 PLCL1Q15111 1095 aa9.73□□□□□ -0.85
SMC1B-202ENST00000404354 EFCAB12Q6NXP0 572 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms