RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 RNF219Q5W0B1 726 aaPredicted RBP9.57□□□□□ -0.88
NUP43-204ENST00000403890 RAB11FIP2Q7L804 512 aa9.57□□□□□ -0.88
NUP43-204ENST00000403890 DCP2Q8IU60 420 aaKnown RBP9.57□□□□□ -0.88
NUP43-204ENST00000403890 CCDC117Q8IWD4 279 aaPredicted RBP9.57□□□□□ -0.88
NUP43-204ENST00000403890 ZNF507Q8TCN5 953 aa9.57□□□□□ -0.88
NUP43-204ENST00000403890 RNF139Q8WU17 664 aa9.57□□□□□ -0.88
NUP43-204ENST00000403890 HTR3CQ8WXA8 447 aa9.57□□□□□ -0.88
NUP43-204ENST00000403890 TWNKQ96RR1 684 aa9.57□□□□□ -0.88
NUP43-204ENST00000403890 MYOCQ99972 504 aa9.57□□□□□ -0.88
NUP43-204ENST00000403890 UBXN6Q9BZV1 441 aa9.57□□□□□ -0.88
NUP43-204ENST00000403890 PREBQ9HCU5 417 aa9.57□□□□□ -0.88
NUP43-204ENST00000403890 SFMBT1Q9UHJ3 866 aa9.57□□□□□ -0.88
NUP43-204ENST00000403890 SALL4Q9UJQ4 1053 aa9.57□□□□□ -0.88
NUP43-204ENST00000403890 CEP83Q9Y592 693 aa9.57□□□□□ -0.88
NUP43-204ENST00000403890 PCDHB11Q9Y5F2 797 aa9.57□□□□□ -0.88
NUP43-204ENST00000403890 CSNK1G3Q9Y6M4 447 aa9.57□□□□□ -0.88
NUP43-204ENST00000403890 GOLGA6L7A0A1B0GV03 622 aa9.56□□□□□ -0.88
NUP43-204ENST00000403890 H3BQV1 296 aa9.56□□□□□ -0.88
NUP43-204ENST00000403890 TMX2-CTNND1H3BSU7 103 aa9.56□□□□□ -0.88
NUP43-204ENST00000403890 TPP1O14773 563 aa9.56□□□□□ -0.88
NUP43-204ENST00000403890 MUSKO15146 869 aa9.56□□□□□ -0.88
NUP43-204ENST00000403890 EIF3DO15371 548 aaKnown RBP eCLIP9.56□□□□□ -0.88
NUP43-204ENST00000403890 MOCS3O95396 460 aa9.56□□□□□ -0.88
NUP43-204ENST00000403890 ZBED1O96006 694 aa9.56□□□□□ -0.88
NUP43-204ENST00000403890 PRLRP16471 622 aa9.56□□□□□ -0.88
NUP43-204ENST00000403890 NNMTP40261 264 aa9.56□□□□□ -0.88
NUP43-204ENST00000403890 ASPAP45381 313 aa9.56□□□□□ -0.88
NUP43-204ENST00000403890 SLC11A2P49281 568 aa9.56□□□□□ -0.88
NUP43-204ENST00000403890 PDX1P52945 283 aa9.56□□□□□ -0.88
NUP43-204ENST00000403890 CLDN10P78369 228 aa9.56□□□□□ -0.88
NUP43-204ENST00000403890 INCA1Q0VD86 236 aa9.56□□□□□ -0.88
NUP43-204ENST00000403890 CNTN1Q12860 1018 aa9.56□□□□□ -0.88
NUP43-204ENST00000403890 KCNAB2Q13303 367 aa9.56□□□□□ -0.88
NUP43-204ENST00000403890 CDH18Q13634 790 aa9.56□□□□□ -0.88
NUP43-204ENST00000403890 PITRM1Q5JRX3 1037 aa9.56□□□□□ -0.88
NUP43-204ENST00000403890 RAB41Q5JT25 222 aa9.56□□□□□ -0.88
NUP43-204ENST00000403890 PERM1Q5SV97 790 aa9.56□□□□□ -0.88
NUP43-204ENST00000403890 PPP1R26Q5T8A7 1209 aaPredicted RBP9.56□□□□□ -0.88
NUP43-204ENST00000403890 AGBL4Q5VU57 503 aa9.56□□□□□ -0.88
NUP43-204ENST00000403890 PM20D1Q6GTS8 502 aa9.56□□□□□ -0.88
NUP43-204ENST00000403890 NEK5Q6P3R8 708 aa9.56□□□□□ -0.88
NUP43-204ENST00000403890 BORAQ6PGQ7 559 aa9.56□□□□□ -0.88
NUP43-204ENST00000403890 Q6ZSR6 202 aa9.56□□□□□ -0.88
NUP43-204ENST00000403890 VASH2Q86V25 355 aa9.56□□□□□ -0.88
NUP43-204ENST00000403890 ZNF548Q8NEK5 533 aaPredicted RBP9.56□□□□□ -0.88
NUP43-204ENST00000403890 SPATA20Q8TB22 786 aa9.56□□□□□ -0.88
NUP43-204ENST00000403890 FAM174AQ8TBP5 190 aa9.56□□□□□ -0.88
NUP43-204ENST00000403890 PLEKHO2Q8TD55 490 aa9.56□□□□□ -0.88
NUP43-204ENST00000403890 PARD3BQ8TEW8 1205 aa9.56□□□□□ -0.88
NUP43-204ENST00000403890 TAF4BQ92750 862 aa9.56□□□□□ -0.88
NUP43-204ENST00000403890 KLK6Q92876 244 aa9.56□□□□□ -0.88
NUP43-204ENST00000403890 GLMNQ92990 594 aa9.56□□□□□ -0.88
NUP43-204ENST00000403890 NAT6Q93015 286 aa9.56□□□□□ -0.88
NUP43-204ENST00000403890 RPL10LQ96L21 214 aaKnown RBP9.56□□□□□ -0.88
NUP43-204ENST00000403890 SPAG5Q96R06 1193 aa9.56□□□□□ -0.88
NUP43-204ENST00000403890 IL12RB2Q99665 862 aa9.56□□□□□ -0.88
NUP43-204ENST00000403890 STRADBQ9C0K7 418 aa9.56□□□□□ -0.88
NUP43-204ENST00000403890 DNAI2Q9GZS0 605 aa9.56□□□□□ -0.88
NUP43-204ENST00000403890 TUBD1Q9UJT1 453 aa9.56□□□□□ -0.88
NUP43-204ENST00000403890 PLAAQ9Y263 795 aa9.56□□□□□ -0.88
NUP43-204ENST00000403890 ITPR3Q14573 2671 aa9.56□□□□□ -0.88
NUP43-204ENST00000403890 FBN2P35556 2912 aa9.55□□□□□ -0.88
NUP43-204ENST00000403890 A0A1W2PQU0 124 aa9.55□□□□□ -0.88
NUP43-204ENST00000403890 TYW5A2RUC4 315 aaKnown RBP9.55□□□□□ -0.88
NUP43-204ENST00000403890 LRRIQ3A6PVS8 624 aaPredicted RBP9.55□□□□□ -0.88
NUP43-204ENST00000403890 H3BM21 787 aa9.55□□□□□ -0.88
NUP43-204ENST00000403890 AQP9O43315 295 aa9.55□□□□□ -0.88
NUP43-204ENST00000403890 EXOC3O60645 756 aa9.55□□□□□ -0.88
NUP43-204ENST00000403890 CSF2P04141 144 aa9.55□□□□□ -0.88
NUP43-204ENST00000403890 VAV1P15498 845 aa9.55□□□□□ -0.88
NUP43-204ENST00000403890 WT1P19544 449 aaPredicted RBP9.55□□□□□ -0.88
NUP43-204ENST00000403890 HNRNPA2B1P22626 353 aaKnown RBP9.55□□□□□ -0.88
NUP43-204ENST00000403890 SLC6A4P31645 630 aa9.55□□□□□ -0.88
NUP43-204ENST00000403890 TXLNAP40222 546 aa9.55□□□□□ -0.88
NUP43-204ENST00000403890 TKTL1P51854 596 aa9.55□□□□□ -0.88
NUP43-204ENST00000403890 POLE2P56282 527 aa9.55□□□□□ -0.88
NUP43-204ENST00000403890 CLDN2P57739 230 aa9.55□□□□□ -0.88
NUP43-204ENST00000403890 ZNF284Q2VY69 593 aa9.55□□□□□ -0.88
NUP43-204ENST00000403890 DEFB133Q30KQ1 61 aa9.55□□□□□ -0.88
NUP43-204ENST00000403890 FAM133BQ5BKY9 247 aaKnown RBP9.55□□□□□ -0.88
NUP43-204ENST00000403890 FSCBQ5H9T9 825 aa9.55□□□□□ -0.88
NUP43-204ENST00000403890 BSPRYQ5W0U4 402 aa9.55□□□□□ -0.88
NUP43-204ENST00000403890 CCDC73Q6ZRK6 1079 aa9.55□□□□□ -0.88
NUP43-204ENST00000403890 MMS22LQ6ZRQ5 1243 aa9.55□□□□□ -0.88
NUP43-204ENST00000403890 EPM2AIP1Q7L775 607 aaPredicted RBP9.55□□□□□ -0.88
NUP43-204ENST00000403890 ABI3BPQ7Z7G0 1075 aa9.55□□□□□ -0.88
NUP43-204ENST00000403890 PIGZQ86VD9 579 aa9.55□□□□□ -0.88
NUP43-204ENST00000403890 UNC45BQ8IWX7 931 aa9.55□□□□□ -0.88
NUP43-204ENST00000403890 SLC22A18ASQ8N1D0 253 aa9.55□□□□□ -0.88
NUP43-204ENST00000403890 CARNMT1Q8N4J0 409 aa9.55□□□□□ -0.88
NUP43-204ENST00000403890 HJURPQ8NCD3 748 aaPredicted RBP9.55□□□□□ -0.88
NUP43-204ENST00000403890 NDRG1Q92597 394 aaKnown RBP9.55□□□□□ -0.88
NUP43-204ENST00000403890 EDEM1Q92611 657 aa9.55□□□□□ -0.88
NUP43-204ENST00000403890 HEXIM2Q96MH2 286 aaKnown RBP9.55□□□□□ -0.88
NUP43-204ENST00000403890 NOX5Q96PH1 765 aa9.55□□□□□ -0.88
NUP43-204ENST00000403890 SYNDIG1Q9H7V2 258 aa9.55□□□□□ -0.88
NUP43-204ENST00000403890 EPB41L5Q9HCM4 733 aa9.55□□□□□ -0.88
NUP43-204ENST00000403890 FZD3Q9NPG1 666 aa9.55□□□□□ -0.88
NUP43-204ENST00000403890 TMPRSS4Q9NRS4 437 aa9.55□□□□□ -0.88
NUP43-204ENST00000403890 SARDHQ9UL12 918 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms