RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 TGFB1I1O43294 461 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 TBC1D12O60347 775 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 SYNCRIPO60506 623 aaKnown RBP3.31□□□□□ -1.88
KNL1-202ENST00000399668 CCNT2O60583 730 aaKnown RBP3.31□□□□□ -1.88
KNL1-202ENST00000399668 ALDH1A2O94788 518 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 FBXO21O94952 628 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 RTN3O95197 1032 aaPredicted RBP3.31□□□□□ -1.88
KNL1-202ENST00000399668 CPSF4O95639 269 aaKnown RBP3.31□□□□□ -1.88
KNL1-202ENST00000399668 MPOP05164 745 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 CYP3A4P08684 503 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 POU1F1P28069 291 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 HALP42357 657 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 MMP13P45452 471 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 CD151P48509 253 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 RAP1GDS1P52306 607 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 NAGLUP54802 743 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 TAS2R40P59535 323 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 FSTL1Q12841 308 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 CSTF3Q12996 717 aaKnown RBP3.31□□□□□ -1.88
KNL1-202ENST00000399668 NFYCQ13952 458 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 RRP1BQ14684 758 aaKnown RBP3.31□□□□□ -1.88
KNL1-202ENST00000399668 FASTKD3Q14CZ7 662 aaKnown RBP3.31□□□□□ -1.88
KNL1-202ENST00000399668 CNGA2Q16280 664 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 CCDC142Q17RM4 750 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 ZNF284Q2VY69 593 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 CRY2Q49AN0 593 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 SLC30A9Q6PML9 568 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 TRMT11Q7Z4G4 463 aaKnown RBP3.31□□□□□ -1.88
KNL1-202ENST00000399668 MILR1Q7Z6M3 343 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 IRF2BP1Q8IU81 584 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 PSTKQ8IV42 348 aaKnown RBP3.31□□□□□ -1.88
KNL1-202ENST00000399668 TBC1D19Q8N5T2 526 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 C4orf32Q8N8J7 132 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 NMD3Q96D46 503 aaKnown RBP3.31□□□□□ -1.88
KNL1-202ENST00000399668 KREMEN1Q96MU8 473 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 CDK5RAP1Q96SZ6 601 aaKnown RBP3.31□□□□□ -1.88
KNL1-202ENST00000399668 MTIF3Q9H2K0 278 aaKnown RBP3.31□□□□□ -1.88
KNL1-202ENST00000399668 BLOC1S6Q9UL45 172 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 EIF3LQ9Y262 564 aaKnown RBP3.31□□□□□ -1.88
KNL1-202ENST00000399668 SIPA1L1O43166 1804 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 TICRRQ7Z2Z1 1910 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 MANSC4A6NHS7 340 aaPredicted RBP3.31□□□□□ -1.88
KNL1-202ENST00000399668 ADAMTS3O15072 1205 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 B4GALT5O43286 388 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 ATP6V1G2O95670 118 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 APOA1P02647 267 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 ARL4DP49703 201 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 PKNOX1P55347 436 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 SKOR1P84550 965 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 CHRNB3Q05901 458 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 MTFR1Q15390 333 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 TAF2Q6P1X5 1199 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 BNC2Q6ZN30 1099 aaPredicted RBP3.31□□□□□ -1.88
KNL1-202ENST00000399668 LRRC55Q6ZSA7 311 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 GPR142Q7Z601 462 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 MYO1HQ8N1T3 1032 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 OR52K2Q8NGK3 314 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 PLEKHA8Q96JA3 519 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 ZFP42Q96MM3 310 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 KCTD14Q9BQ13 255 aaPredicted RBP3.31□□□□□ -1.88
KNL1-202ENST00000399668 SNRNP25Q9BV90 132 aaKnown RBP3.31□□□□□ -1.88
KNL1-202ENST00000399668 RNF208Q9H0X6 261 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 POMKQ9H5K3 350 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 TMEM134Q9H6X4 195 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 NMRAL1Q9HBL8 299 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 POPDC2Q9HBU9 364 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 FBXO6Q9NRD1 293 aaPredicted RBP3.31□□□□□ -1.88
KNL1-202ENST00000399668 TBC1D13Q9NVG8 400 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 NINJ2Q9NZG7 142 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 ZNF112Q9UJU3 913 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 SOX13Q9UN79 622 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 ST3GAL5Q9UNP4 418 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 PCDHB5Q9Y5E4 795 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 COL18A1P39060 1754 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 CDH23Q9H251 3354 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 ASTN2O75129 1339 aaPredicted RBP3.31□□□□□ -1.88
KNL1-202ENST00000399668 F8W810 466 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 APOC4-APOC2K7ER74 178 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 M0R3G1 203 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 BTN3A1O00481 513 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 KPNA3O00505 521 aaPredicted RBP3.31□□□□□ -1.88
KNL1-202ENST00000399668 NOL4O94818 638 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 CLPTM1O96005 669 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 APOC2P02655 101 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 PAEPP09466 180 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 SMIM10L2AP0DMW4 78 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 SMIM10L2BP0DMW5 78 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 AKR1A1P14550 325 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 SLC2A4P14672 509 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 MSH3P20585 1137 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 LRPAP1P30533 357 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 ATP5C1P36542 298 aaKnown RBP3.31□□□□□ -1.88
KNL1-202ENST00000399668 GP5P40197 560 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 OXCT1P55809 520 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 BTG3Q14201 252 aaPredicted RBP3.31□□□□□ -1.88
KNL1-202ENST00000399668 ZACNQ401N2 412 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 SETMARQ53H47 684 aaPredicted RBP3.31□□□□□ -1.88
KNL1-202ENST00000399668 SDHAF4Q5VUM1 108 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 ZNF280DQ6N043 979 aa3.31□□□□□ -1.88
KNL1-202ENST00000399668 CYP2R1Q6VVX0 501 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms