RNA–Protein interactions for RNA: ENST00000398519.9

CSNK1D-204, Transcript of casein kinase 1 delta, humanhuman

TSL 5 BASIC

Gene CSNK1D, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-204ENST00000398519 RASA4O43374 803 aa17.76■□□□□ 0.43
CSNK1D-204ENST00000398519 ATG13O75143 517 aa17.76■□□□□ 0.43
CSNK1D-204ENST00000398519 ZMPSTE24O75844 475 aa17.76■□□□□ 0.43
CSNK1D-204ENST00000398519 ZRANB2O95218 330 aaKnown RBP eCLIP17.76■□□□□ 0.436e-6■■■■□ 21
CSNK1D-204ENST00000398519 NTSR1P30989 418 aa17.76■□□□□ 0.43
CSNK1D-204ENST00000398519 WASP42768 502 aa17.76■□□□□ 0.43
CSNK1D-204ENST00000398519 STK19P49842 368 aaPredicted RBP17.76■□□□□ 0.43
CSNK1D-204ENST00000398519 SPOCD1Q6ZMY3 1216 aa17.76■□□□□ 0.43
CSNK1D-204ENST00000398519 TP53INP2Q8IXH6 220 aa17.76■□□□□ 0.43
CSNK1D-204ENST00000398519 ACDQ96AP0 544 aa17.76■□□□□ 0.43
CSNK1D-204ENST00000398519 SLC39A8Q9C0K1 460 aa17.76■□□□□ 0.43
CSNK1D-204ENST00000398519 STON1Q9Y6Q2 735 aa17.76■□□□□ 0.43
CSNK1D-204ENST00000398519 DDX3YO15523 660 aaKnown RBP17.75■□□□□ 0.43
CSNK1D-204ENST00000398519 SRPRAP08240 638 aaKnown RBP17.75■□□□□ 0.43
CSNK1D-204ENST00000398519 PRKCHP24723 683 aa17.75■□□□□ 0.43
CSNK1D-204ENST00000398519 RWDD2BP57060 319 aa17.75■□□□□ 0.43
CSNK1D-204ENST00000398519 ARF5P84085 180 aa17.75■□□□□ 0.43
CSNK1D-204ENST00000398519 SERINC3Q13530 473 aa17.75■□□□□ 0.43
CSNK1D-204ENST00000398519 FNDC3BQ53EP0 1204 aaKnown RBP17.75■□□□□ 0.43
CSNK1D-204ENST00000398519 SERPINA13PQ6UXR4 307 aa17.75■□□□□ 0.43
CSNK1D-204ENST00000398519 MAMSTRQ6ZN01 415 aa17.75■□□□□ 0.43
CSNK1D-204ENST00000398519 SYT13Q7L8C5 426 aa17.75■□□□□ 0.43
CSNK1D-204ENST00000398519 RCOR2Q8IZ40 523 aa17.75■□□□□ 0.43
CSNK1D-204ENST00000398519 LZTR1Q8N653 840 aa17.75■□□□□ 0.43
CSNK1D-204ENST00000398519 DTWD2Q8NBA8 298 aa17.75■□□□□ 0.43
CSNK1D-204ENST00000398519 TRIM58Q8NG06 486 aa17.75■□□□□ 0.43
CSNK1D-204ENST00000398519 RBM41Q96IZ5 413 aaKnown RBP17.75■□□□□ 0.43
CSNK1D-204ENST00000398519 GABRG3Q99928 467 aa17.75■□□□□ 0.43
CSNK1D-204ENST00000398519 TMEM245Q9H330 911 aa17.75■□□□□ 0.43
CSNK1D-204ENST00000398519 SPATA6Q9NWH7 488 aaPredicted RBP17.75■□□□□ 0.43
CSNK1D-204ENST00000398519 SLCO3A1Q9UIG8 710 aa17.75■□□□□ 0.43
CSNK1D-204ENST00000398519 NYNRINQ9P2P1 1898 aaKnown RBP17.75■□□□□ 0.43
CSNK1D-204ENST00000398519 WDFY4Q6ZS81 3184 aa17.75■□□□□ 0.43
CSNK1D-204ENST00000398519 MFSD11O43934 449 aa17.74■□□□□ 0.43
CSNK1D-204ENST00000398519 MT-CO1P00395 513 aa17.74■□□□□ 0.43
CSNK1D-204ENST00000398519 SATB1Q01826 763 aa17.74■□□□□ 0.43
CSNK1D-204ENST00000398519 PAFAH1B3Q15102 231 aaKnown RBP17.74■□□□□ 0.43
CSNK1D-204ENST00000398519 E2F5Q15329 346 aa17.74■□□□□ 0.43
CSNK1D-204ENST00000398519 LLGL1Q15334 1064 aa17.74■□□□□ 0.43
CSNK1D-204ENST00000398519 TFDP3Q5H9I0 405 aa17.74■□□□□ 0.43
CSNK1D-204ENST00000398519 EOGTQ5NDL2 527 aa17.74■□□□□ 0.43
CSNK1D-204ENST00000398519 MEI1Q5TIA1 1274 aa17.74■□□□□ 0.43
CSNK1D-204ENST00000398519 SLC9A4Q6AI14 798 aa17.74■□□□□ 0.43
CSNK1D-204ENST00000398519 LINGO4Q6UY18 593 aa17.74■□□□□ 0.43
CSNK1D-204ENST00000398519 CCDC50Q8IVM0 306 aa17.74■□□□□ 0.43
CSNK1D-204ENST00000398519 UBL4BQ8N7F7 174 aa17.74■□□□□ 0.43
CSNK1D-204ENST00000398519 PLD5Q8N7P1 536 aa17.74■□□□□ 0.43
CSNK1D-204ENST00000398519 ZNF366Q8N895 744 aa17.74■□□□□ 0.43
CSNK1D-204ENST00000398519 KDM1BQ8NB78 822 aa17.74■□□□□ 0.43
CSNK1D-204ENST00000398519 SLC25A13Q9UJS0 675 aa17.74■□□□□ 0.43
CSNK1D-204ENST00000398519 HS3ST2Q9Y278 367 aa17.74■□□□□ 0.43
CSNK1D-204ENST00000398519 MYO18AQ92614 2054 aaKnown RBP17.74■□□□□ 0.43
CSNK1D-204ENST00000398519 hCG_1818297A0A087WSY0 165 aa17.74■□□□□ 0.43
CSNK1D-204ENST00000398519 A0A1W2PQF6 199 aa17.74■□□□□ 0.43
CSNK1D-204ENST00000398519 DFFAO00273 331 aa17.74■□□□□ 0.43
CSNK1D-204ENST00000398519 KDELR3O43731 214 aa17.74■□□□□ 0.43
CSNK1D-204ENST00000398519 KRT10P13645 584 aa17.74■□□□□ 0.43
CSNK1D-204ENST00000398519 HLA-EP13747 358 aa17.74■□□□□ 0.43
CSNK1D-204ENST00000398519 HOXB2P14652 356 aa17.74■□□□□ 0.43
CSNK1D-204ENST00000398519 SERPINB6P35237 376 aa17.74■□□□□ 0.43
CSNK1D-204ENST00000398519 VASPP50552 380 aaPredicted RBP17.74■□□□□ 0.43
CSNK1D-204ENST00000398519 PAPOLAP51003 745 aaKnown RBP17.74■□□□□ 0.43
CSNK1D-204ENST00000398519 DNA2P51530 1060 aa17.74■□□□□ 0.43
CSNK1D-204ENST00000398519 ST8SIA6P61647 398 aa17.74■□□□□ 0.43
CSNK1D-204ENST00000398519 DCAF12L1Q5VU92 463 aa17.74■□□□□ 0.43
CSNK1D-204ENST00000398519 SDE2Q6IQ49 451 aa17.74■□□□□ 0.43
CSNK1D-204ENST00000398519 TMEM92Q6UXU6 159 aa17.74■□□□□ 0.43
CSNK1D-204ENST00000398519 ZNF354CQ86Y25 554 aa17.74■□□□□ 0.43
CSNK1D-204ENST00000398519 RFX6Q8HWS3 928 aa17.74■□□□□ 0.43
CSNK1D-204ENST00000398519 C1orf210Q8IVY1 113 aa17.74■□□□□ 0.43
CSNK1D-204ENST00000398519 MAK16Q9BXY0 300 aaKnown RBP17.74■□□□□ 0.43
CSNK1D-204ENST00000398519 ACTL7AQ9Y615 435 aa17.74■□□□□ 0.43
CSNK1D-204ENST00000398519 RAD54BQ9Y620 910 aa17.74■□□□□ 0.43
CSNK1D-204ENST00000398519 ARHGAP42A6NI28 874 aa17.73■□□□□ 0.43
CSNK1D-204ENST00000398519 TTC34A8MYJ7 566 aa17.73■□□□□ 0.43
CSNK1D-204ENST00000398519 K7ERQ8 282 aa17.73■□□□□ 0.43
CSNK1D-204ENST00000398519 CD160O95971 181 aa17.73■□□□□ 0.43
CSNK1D-204ENST00000398519 PYGMP11217 842 aa17.73■□□□□ 0.43
CSNK1D-204ENST00000398519 SRCP12931 536 aa17.73■□□□□ 0.43
CSNK1D-204ENST00000398519 COL9A1P20849 921 aa17.73■□□□□ 0.43
CSNK1D-204ENST00000398519 CCR3P51677 355 aa17.73■□□□□ 0.43
CSNK1D-204ENST00000398519 GBE1Q04446 702 aa17.73■□□□□ 0.43
CSNK1D-204ENST00000398519 ADCY2Q08462 1091 aa17.73■□□□□ 0.43
CSNK1D-204ENST00000398519 CRY1Q16526 586 aa17.73■□□□□ 0.43
CSNK1D-204ENST00000398519 PPP2R5EQ16537 467 aa17.73■□□□□ 0.43
CSNK1D-204ENST00000398519 RETSATQ6NUM9 610 aa17.73■□□□□ 0.43
CSNK1D-204ENST00000398519 KIAA1211LQ6NV74 962 aa17.73■□□□□ 0.43
CSNK1D-204ENST00000398519 AADACL2Q6P093 401 aa17.73■□□□□ 0.43
CSNK1D-204ENST00000398519 LEKR1Q6ZMV7 388 aa17.73■□□□□ 0.43
CSNK1D-204ENST00000398519 ARHGAP36Q6ZRI8 547 aa17.73■□□□□ 0.43
CSNK1D-204ENST00000398519 SH2D3CQ8N5H7 860 aa17.73■□□□□ 0.43
CSNK1D-204ENST00000398519 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.73■□□□□ 0.43
CSNK1D-204ENST00000398519 CD248Q9HCU0 757 aa17.73■□□□□ 0.43
CSNK1D-204ENST00000398519 PRMT8Q9NR22 394 aaPredicted RBP17.73■□□□□ 0.43
CSNK1D-204ENST00000398519 HPCAL4Q9UM19 191 aa17.73■□□□□ 0.43
CSNK1D-204ENST00000398519 ZNF318Q5VUA4 2279 aa17.73■□□□□ 0.43
CSNK1D-204ENST00000398519 NUP205Q92621 2012 aa17.72■□□□□ 0.43
CSNK1D-204ENST00000398519 CXorf51AA0A1B0GTR3 108 aa17.72■□□□□ 0.43
CSNK1D-204ENST00000398519 GOLGA6L9A6NEM1 432 aa17.72■□□□□ 0.43
CSNK1D-204ENST00000398519 APOL1O14791 398 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms