RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 TIGD7Q6NT04 549 aaPredicted RBP28.1■■■□□ 2.09
CPNE1-203ENST00000397442 C4orf22Q6V702 233 aa28.1■■■□□ 2.09
CPNE1-203ENST00000397442 EP400NLQ6ZTU2 488 aa28.1■■■□□ 2.09
CPNE1-203ENST00000397442 TMEM25Q86YD3 366 aa28.1■■■□□ 2.09
CPNE1-203ENST00000397442 KIAA1958Q8N8K9 716 aa28.1■■■□□ 2.09
CPNE1-203ENST00000397442 MAML1Q92585 1016 aa28.1■■■□□ 2.09
CPNE1-203ENST00000397442 IL12RB2Q99665 862 aa28.1■■■□□ 2.09
CPNE1-203ENST00000397442 RAB6BQ9NRW1 208 aa28.1■■■□□ 2.09
CPNE1-203ENST00000397442 PLK2Q9NYY3 685 aa28.1■■■□□ 2.09
CPNE1-203ENST00000397442 WNT6Q9Y6F9 365 aa28.1■■■□□ 2.09
CPNE1-203ENST00000397442 FCARP24071 287 aa28.1■■■□□ 2.09
CPNE1-203ENST00000397442 MAP9Q49MG5 647 aa28.1■■■□□ 2.09
CPNE1-203ENST00000397442 ARHGEF18Q6ZSZ5 1173 aa28.1■■■□□ 2.09
CPNE1-203ENST00000397442 ADGRG2Q8IZP9 1017 aa28.1■■■□□ 2.09
CPNE1-203ENST00000397442 CNTD1Q8N815 330 aa28.1■■■□□ 2.09
CPNE1-203ENST00000397442 OTUB2Q96DC9 234 aa28.1■■■□□ 2.09
CPNE1-203ENST00000397442 FMO2Q99518 471 aa28.1■■■□□ 2.09
CPNE1-203ENST00000397442 VAT1Q99536 393 aa28.1■■■□□ 2.09
CPNE1-203ENST00000397442 CLEC4EQ9ULY5 219 aa28.1■■■□□ 2.09
CPNE1-203ENST00000397442 BRWD1Q9NSI6 2320 aa28.09■■■□□ 2.09
CPNE1-203ENST00000397442 H0Y626 953 aa28.09■■■□□ 2.09
CPNE1-203ENST00000397442 JCHAINP01591 159 aa28.09■■■□□ 2.09
CPNE1-203ENST00000397442 BASP1P80723 227 aaKnown RBP28.09■■■□□ 2.09
CPNE1-203ENST00000397442 CAV1Q03135 178 aa28.09■■■□□ 2.09
CPNE1-203ENST00000397442 FAXCQ5TGI0 409 aa28.09■■■□□ 2.09
CPNE1-203ENST00000397442 ANKRD22Q5VYY1 191 aa28.09■■■□□ 2.09
CPNE1-203ENST00000397442 EMBQ6PCB8 327 aa28.09■■■□□ 2.09
CPNE1-203ENST00000397442 NAT8LQ8N9F0 302 aa28.09■■■□□ 2.09
CPNE1-203ENST00000397442 PRCCQ92733 491 aaPredicted RBP28.09■■■□□ 2.09
CPNE1-203ENST00000397442 TEKT5Q96M29 485 aa28.09■■■□□ 2.09
CPNE1-203ENST00000397442 GDAP1L1Q96MZ0 367 aa28.09■■■□□ 2.09
CPNE1-203ENST00000397442 MYADMQ96S97 322 aa28.09■■■□□ 2.09
CPNE1-203ENST00000397442 ETNK1Q9HBU6 452 aa28.09■■■□□ 2.09
CPNE1-203ENST00000397442 PRAMEF11O60813 436 aa28.08■■■□□ 2.09
CPNE1-203ENST00000397442 PENKP01210 267 aaPredicted RBP28.08■■■□□ 2.09
CPNE1-203ENST00000397442 CD68P34810 354 aaPredicted RBP28.08■■■□□ 2.09
CPNE1-203ENST00000397442 NUMBP49757 651 aa28.08■■■□□ 2.09
CPNE1-203ENST00000397442 IL10RBQ08334 325 aa28.08■■■□□ 2.09
CPNE1-203ENST00000397442 KCNJ11Q14654 390 aa28.08■■■□□ 2.09
CPNE1-203ENST00000397442 MORF4L2Q15014 288 aa28.08■■■□□ 2.09
CPNE1-203ENST00000397442 RNF219Q5W0B1 726 aaPredicted RBP28.08■■■□□ 2.09
CPNE1-203ENST00000397442 ZNF783Q6ZMS7 281 aa28.08■■■□□ 2.09
CPNE1-203ENST00000397442 PID1Q7Z2X4 250 aa28.08■■■□□ 2.09
CPNE1-203ENST00000397442 PCGF5Q86SE9 256 aa28.08■■■□□ 2.09
CPNE1-203ENST00000397442 PPIL6Q8IXY8 311 aa28.08■■■□□ 2.09
CPNE1-203ENST00000397442 IRF7Q92985 503 aa28.08■■■□□ 2.09
CPNE1-203ENST00000397442 CAVIN3Q969G5 261 aa28.08■■■□□ 2.09
CPNE1-203ENST00000397442 RIPOR3Q96MK2 946 aa28.08■■■□□ 2.09
CPNE1-203ENST00000397442 ACE2Q9BYF1 805 aaPredicted RBP28.08■■■□□ 2.09
CPNE1-203ENST00000397442 PDFQ9HBH1 243 aa28.08■■■□□ 2.09
CPNE1-203ENST00000397442 ARFGAP3Q9NP61 516 aa28.08■■■□□ 2.09
CPNE1-203ENST00000397442 SPHK2Q9NRA0 654 aa28.08■■■□□ 2.09
CPNE1-203ENST00000397442 KLHL8Q9P2G9 620 aaPredicted RBP28.08■■■□□ 2.09
CPNE1-203ENST00000397442 TRHDEQ9UKU6 1024 aa28.08■■■□□ 2.09
CPNE1-203ENST00000397442 SHOC2Q9UQ13 582 aa28.08■■■□□ 2.09
CPNE1-203ENST00000397442 OR51B4Q9Y5P0 310 aa28.08■■■□□ 2.09
CPNE1-203ENST00000397442 TCRBV7S3A2A0A539 114 aa28.07■■■□□ 2.08
CPNE1-203ENST00000397442 ZBTB24O43167 697 aaPredicted RBP28.07■■■□□ 2.08
CPNE1-203ENST00000397442 MFN1Q8IWA4 741 aa28.07■■■□□ 2.08
CPNE1-203ENST00000397442 MICALL1Q8N3F8 863 aa28.07■■■□□ 2.08
CPNE1-203ENST00000397442 SMRP1Q8NCR6 262 aa28.07■■■□□ 2.08
CPNE1-203ENST00000397442 USP33Q8TEY7 942 aa28.07■■■□□ 2.08
CPNE1-203ENST00000397442 ALG14Q96F25 216 aa28.07■■■□□ 2.08
CPNE1-203ENST00000397442 AGAP3Q96P47 875 aa28.07■■■□□ 2.08
CPNE1-203ENST00000397442 SP110Q9HB58 689 aa28.07■■■□□ 2.08
CPNE1-203ENST00000397442 OBP2AQ9NY56 170 aa28.07■■■□□ 2.08
CPNE1-203ENST00000397442 IGSF9Q9P2J2 1179 aa28.07■■■□□ 2.08
CPNE1-203ENST00000397442 XIRP2A4UGR9 3374 aa28.07■■■□□ 2.08
CPNE1-203ENST00000397442 SLC9A3R1O14745 358 aaPredicted RBP28.07■■■□□ 2.08
CPNE1-203ENST00000397442 CYBBP04839 570 aa28.07■■■□□ 2.08
CPNE1-203ENST00000397442 MAGEA6P43360 314 aa28.07■■■□□ 2.08
CPNE1-203ENST00000397442 CDH18Q13634 790 aa28.07■■■□□ 2.08
CPNE1-203ENST00000397442 HNRNPDQ14103 355 aaKnown RBP28.07■■■□□ 2.08
CPNE1-203ENST00000397442 PRPF38BQ5VTL8 546 aaKnown RBP28.07■■■□□ 2.08
CPNE1-203ENST00000397442 ZNF354CQ86Y25 554 aa28.07■■■□□ 2.08
CPNE1-203ENST00000397442 BPIFB1Q8TDL5 484 aa28.07■■■□□ 2.08
CPNE1-203ENST00000397442 GAS2L1Q99501 681 aaPredicted RBP28.07■■■□□ 2.08
CPNE1-203ENST00000397442 GORASP1Q9BQQ3 440 aa28.07■■■□□ 2.08
CPNE1-203ENST00000397442 POMKQ9H5K3 350 aa28.07■■■□□ 2.08
CPNE1-203ENST00000397442 KIF26AQ9ULI4 1882 aaPredicted RBP28.06■■■□□ 2.08
CPNE1-203ENST00000397442 KDELR3O43731 214 aa28.06■■■□□ 2.08
CPNE1-203ENST00000397442 TMEM63AO94886 807 aa28.06■■■□□ 2.08
CPNE1-203ENST00000397442 GLDCP23378 1020 aa28.06■■■□□ 2.08
CPNE1-203ENST00000397442 PSMB4P28070 264 aa28.06■■■□□ 2.08
CPNE1-203ENST00000397442 MZF1P28698 734 aaPredicted RBP28.06■■■□□ 2.08
CPNE1-203ENST00000397442 MTHFRP42898 656 aa28.06■■■□□ 2.08
CPNE1-203ENST00000397442 GAD2Q05329 585 aa28.06■■■□□ 2.08
CPNE1-203ENST00000397442 SLC10A7Q0GE19 358 aa28.06■■■□□ 2.08
CPNE1-203ENST00000397442 SEMA5AQ13591 1074 aa28.06■■■□□ 2.08
CPNE1-203ENST00000397442 PARP6Q2NL67 630 aa28.06■■■□□ 2.08
CPNE1-203ENST00000397442 ANO4Q32M45 955 aa28.06■■■□□ 2.08
CPNE1-203ENST00000397442 LY6G5CQ5SRR4 150 aa28.06■■■□□ 2.08
CPNE1-203ENST00000397442 IL31Q6EBC2 164 aa28.06■■■□□ 2.08
CPNE1-203ENST00000397442 HOOK3Q86VS8 718 aa28.06■■■□□ 2.08
CPNE1-203ENST00000397442 ST13P5Q8NFI4 369 aaPredicted RBP28.06■■■□□ 2.08
CPNE1-203ENST00000397442 FIBINQ8TAL6 211 aa28.06■■■□□ 2.08
CPNE1-203ENST00000397442 OSCP1Q8WVF1 389 aa28.06■■■□□ 2.08
CPNE1-203ENST00000397442 ASIC4Q96FT7 647 aa28.06■■■□□ 2.08
CPNE1-203ENST00000397442 PWWP2AQ96N64 755 aa28.06■■■□□ 2.08
CPNE1-203ENST00000397442 FEM1AQ9BSK4 669 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms