RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 ZNF26P17031 533 aaPredicted RBP14.2□□□□□ -0.14
NUP98-204ENST00000397004 TFEBP19484 476 aa14.2□□□□□ -0.14
NUP98-204ENST00000397004 TCN1P20061 433 aaPredicted RBP14.2□□□□□ -0.14
NUP98-204ENST00000397004 RANBP1P43487 201 aa14.2□□□□□ -0.14
NUP98-204ENST00000397004 GLRBP48167 497 aa14.2□□□□□ -0.14
NUP98-204ENST00000397004 GLUD2P49448 558 aa14.2□□□□□ -0.14
NUP98-204ENST00000397004 EMP3P54852 163 aa14.2□□□□□ -0.14
NUP98-204ENST00000397004 CREB5Q02930 508 aa14.2□□□□□ -0.14
NUP98-204ENST00000397004 PDCD2Q16342 344 aaPredicted RBP14.2□□□□□ -0.14
NUP98-204ENST00000397004 KCTD11Q693B1 232 aa14.2□□□□□ -0.14
NUP98-204ENST00000397004 BNIPLQ7Z465 357 aa14.2□□□□□ -0.14
NUP98-204ENST00000397004 DEFB106AQ8N104 65 aa14.2□□□□□ -0.14
NUP98-204ENST00000397004 PNPLA1Q8N8W4 532 aa14.2□□□□□ -0.14
NUP98-204ENST00000397004 SNX31Q8N9S9 440 aa14.2□□□□□ -0.14
NUP98-204ENST00000397004 PRPF18Q99633 342 aaKnown RBP14.2□□□□□ -0.14
NUP98-204ENST00000397004 ATXN10Q9UBB4 475 aa14.2□□□□□ -0.14
NUP98-204ENST00000397004 GJA3Q9Y6H8 435 aa14.2□□□□□ -0.14
NUP98-204ENST00000397004 SMIM31A0A1B0GVY4 71 aa14.2□□□□□ -0.14
NUP98-204ENST00000397004 PHGDHO43175 533 aaKnown RBP14.2□□□□□ -0.14
NUP98-204ENST00000397004 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.2□□□□□ -0.14
NUP98-204ENST00000397004 SH3D19Q5HYK7 790 aa14.2□□□□□ -0.14
NUP98-204ENST00000397004 MAP3K21Q5TCX8 1036 aa14.2□□□□□ -0.14
NUP98-204ENST00000397004 CCNYQ8ND76 341 aa14.2□□□□□ -0.14
NUP98-204ENST00000397004 ZSCAN18Q8TBC5 510 aaPredicted RBP14.2□□□□□ -0.14
NUP98-204ENST00000397004 CDKL2Q92772 493 aa14.2□□□□□ -0.14
NUP98-204ENST00000397004 NMRAL1Q9HBL8 299 aa14.2□□□□□ -0.14
NUP98-204ENST00000397004 C6orf203Q9P0P8 240 aaPredicted RBP14.2□□□□□ -0.14
NUP98-204ENST00000397004 CFLARO15519 480 aa14.2□□□□□ -0.14
NUP98-204ENST00000397004 CLPTM1O96005 669 aa14.2□□□□□ -0.14
NUP98-204ENST00000397004 SRGAP2BP0DMP2 458 aa14.2□□□□□ -0.14
NUP98-204ENST00000397004 CDK4P11802 303 aa14.2□□□□□ -0.14
NUP98-204ENST00000397004 RPL5P46777 297 aaKnown RBP14.2□□□□□ -0.14
NUP98-204ENST00000397004 GRIA4P48058 902 aa14.2□□□□□ -0.14
NUP98-204ENST00000397004 GRM3Q14832 879 aa14.2□□□□□ -0.14
NUP98-204ENST00000397004 CCDC153Q494R4 210 aa14.2□□□□□ -0.14
NUP98-204ENST00000397004 GRTP1Q5TC63 336 aa14.2□□□□□ -0.14
NUP98-204ENST00000397004 DCAF15Q66K64 600 aa14.2□□□□□ -0.14
NUP98-204ENST00000397004 CENPLQ8N0S6 344 aaPredicted RBP14.2□□□□□ -0.14
NUP98-204ENST00000397004 RNF139Q8WU17 664 aa14.2□□□□□ -0.14
NUP98-204ENST00000397004 FERMT1Q9BQL6 677 aa14.2□□□□□ -0.14
NUP98-204ENST00000397004 EIF2AQ9BY44 585 aaKnown RBP14.2□□□□□ -0.14
NUP98-204ENST00000397004 PIGVQ9NUD9 493 aa14.2□□□□□ -0.14
NUP98-204ENST00000397004 KIAA1257Q9ULG3 409 aa14.2□□□□□ -0.14
NUP98-204ENST00000397004 RGSL1A5PLK6 1076 aa14.19□□□□□ -0.14
NUP98-204ENST00000397004 ZBTB24O43167 697 aaPredicted RBP14.19□□□□□ -0.14
NUP98-204ENST00000397004 TRIM13O60858 407 aa14.19□□□□□ -0.14
NUP98-204ENST00000397004 POLBP06746 335 aa14.19□□□□□ -0.14
NUP98-204ENST00000397004 PTPN3P26045 913 aa14.19□□□□□ -0.14
NUP98-204ENST00000397004 NMBRP28336 390 aa14.19□□□□□ -0.14
NUP98-204ENST00000397004 HOXA11P31270 313 aaPredicted RBP14.19□□□□□ -0.14
NUP98-204ENST00000397004 ZBTB17Q13105 803 aa14.19□□□□□ -0.14
NUP98-204ENST00000397004 DPYSQ14117 519 aa14.19□□□□□ -0.14
NUP98-204ENST00000397004 ZBTB6Q15916 424 aa14.19□□□□□ -0.14
NUP98-204ENST00000397004 USP41Q3LFD5 358 aa14.19□□□□□ -0.14
NUP98-204ENST00000397004 AMIGO2Q86SJ2 522 aa14.19□□□□□ -0.14
NUP98-204ENST00000397004 NME8Q8N427 588 aa14.19□□□□□ -0.14
NUP98-204ENST00000397004 HIC2Q96JB3 615 aa14.19□□□□□ -0.14
NUP98-204ENST00000397004 VCX3BQ9H321 246 aa14.19□□□□□ -0.14
NUP98-204ENST00000397004 VCX3AQ9NNX9 186 aa14.19□□□□□ -0.14
NUP98-204ENST00000397004 IRAK4Q9NWZ3 460 aa14.19□□□□□ -0.14
NUP98-204ENST00000397004 UBP1Q9NZI7 540 aa14.19□□□□□ -0.14
NUP98-204ENST00000397004 CDY2AQ9Y6F7 541 aa14.19□□□□□ -0.14
NUP98-204ENST00000397004 CDY1Q9Y6F8 540 aa14.19□□□□□ -0.14
NUP98-204ENST00000397004 PLOD2O00469 737 aa14.19□□□□□ -0.14
NUP98-204ENST00000397004 DCLK1O15075 740 aa14.19□□□□□ -0.14
NUP98-204ENST00000397004 CREB3O43889 395 aa14.19□□□□□ -0.14
NUP98-204ENST00000397004 PIGNO95427 931 aa14.19□□□□□ -0.14
NUP98-204ENST00000397004 FYNP06241 537 aa14.19□□□□□ -0.14
NUP98-204ENST00000397004 ACAT1P24752 427 aaKnown RBP14.19□□□□□ -0.14
NUP98-204ENST00000397004 NAGLUP54802 743 aa14.19□□□□□ -0.14
NUP98-204ENST00000397004 FLOT2Q14254 428 aa14.19□□□□□ -0.14
NUP98-204ENST00000397004 PPP2R5DQ14738 602 aa14.19□□□□□ -0.14
NUP98-204ENST00000397004 CNGA3Q16281 694 aa14.19□□□□□ -0.14
NUP98-204ENST00000397004 IL23RQ5VWK5 629 aa14.19□□□□□ -0.14
NUP98-204ENST00000397004 ZNF280DQ6N043 979 aa14.19□□□□□ -0.14
NUP98-204ENST00000397004 RPS27LQ71UM5 84 aaKnown RBP14.19□□□□□ -0.14
NUP98-204ENST00000397004 SDCCAG8Q86SQ7 713 aaPredicted RBP14.19□□□□□ -0.14
NUP98-204ENST00000397004 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.19□□□□□ -0.14
NUP98-204ENST00000397004 SLCO4A1Q96BD0 722 aa14.19□□□□□ -0.14
NUP98-204ENST00000397004 KCNK16Q96T55 309 aa14.19□□□□□ -0.14
NUP98-204ENST00000397004 PCDHAC1Q9H158 963 aa14.19□□□□□ -0.14
NUP98-204ENST00000397004 LIN28AQ9H9Z2 209 aaKnown RBP14.19□□□□□ -0.14
NUP98-204ENST00000397004 USP2O75604 605 aaPredicted RBP14.19□□□□□ -0.14
NUP98-204ENST00000397004 MX2P20592 715 aa14.19□□□□□ -0.14
NUP98-204ENST00000397004 AVPR1AP37288 418 aa14.19□□□□□ -0.14
NUP98-204ENST00000397004 YBX1P67809 324 aaKnown RBP14.19□□□□□ -0.14
NUP98-204ENST00000397004 VGLL4Q14135 290 aa14.19□□□□□ -0.14
NUP98-204ENST00000397004 MYBPC3Q14896 1274 aa14.19□□□□□ -0.14
NUP98-204ENST00000397004 KYQ8NBH2 561 aa14.19□□□□□ -0.14
NUP98-204ENST00000397004 OR6B3Q8NGW1 331 aa14.19□□□□□ -0.14
NUP98-204ENST00000397004 ATP6V1E2Q96A05 226 aa14.19□□□□□ -0.14
NUP98-204ENST00000397004 CDHR5Q9HBB8 845 aa14.19□□□□□ -0.14
NUP98-204ENST00000397004 SNTG2Q9NY99 539 aa14.19□□□□□ -0.14
NUP98-204ENST00000397004 SNX10Q9Y5X0 201 aa14.19□□□□□ -0.14
NUP98-204ENST00000397004 COPG1Q9Y678 874 aaKnown RBP14.19□□□□□ -0.14
NUP98-204ENST00000397004 TANC1Q9C0D5 1861 aa14.18□□□□□ -0.14
NUP98-204ENST00000397004 CLDN5O00501 218 aa14.18□□□□□ -0.14
NUP98-204ENST00000397004 ENO3P13929 434 aaPredicted RBP14.18□□□□□ -0.14
NUP98-204ENST00000397004 METTL21CQ5VZV1 264 aa14.18□□□□□ -0.14
NUP98-204ENST00000397004 SMYD5Q6GMV2 418 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms