RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 DSEQ9UL01 958 aa15.25■□□□□ 0.03
SCFD2-201ENST00000388940 SNX10Q9Y5X0 201 aa15.25■□□□□ 0.03
SCFD2-201ENST00000388940 NLRC5Q86WI3 1866 aa15.24■□□□□ 0.03
SCFD2-201ENST00000388940 A0A096LPK6 155 aa15.24■□□□□ 0.03
SCFD2-201ENST00000388940 MANSC4A6NHS7 340 aaPredicted RBP15.24■□□□□ 0.03
SCFD2-201ENST00000388940 TMEM114B3SHH9 223 aa15.24■□□□□ 0.03
SCFD2-201ENST00000388940 H2AFYO75367 372 aaKnown RBP15.24■□□□□ 0.03
SCFD2-201ENST00000388940 KRT36O76013 467 aa15.24■□□□□ 0.03
SCFD2-201ENST00000388940 JCHAINP01591 159 aa15.24■□□□□ 0.03
SCFD2-201ENST00000388940 ARRB2P32121 409 aa15.24■□□□□ 0.03
SCFD2-201ENST00000388940 RAB27AP51159 221 aa15.24■□□□□ 0.03
SCFD2-201ENST00000388940 UBAP2LQ14157 1087 aaKnown RBP15.24■□□□□ 0.03
SCFD2-201ENST00000388940 NAA25Q14CX7 972 aa15.24■□□□□ 0.03
SCFD2-201ENST00000388940 CCDC6Q16204 474 aa15.24■□□□□ 0.03
SCFD2-201ENST00000388940 TSNAXIP1Q2TAA8 658 aa15.24■□□□□ 0.03
SCFD2-201ENST00000388940 TRMT5Q32P41 509 aaKnown RBP15.24■□□□□ 0.03
SCFD2-201ENST00000388940 HSP90AA5PQ58FG0 334 aa15.24■□□□□ 0.03
SCFD2-201ENST00000388940 MAVSQ7Z434 540 aa15.24■□□□□ 0.03
SCFD2-201ENST00000388940 LCA5Q86VQ0 697 aa15.24■□□□□ 0.03
SCFD2-201ENST00000388940 PLD6Q8N2A8 252 aaKnown RBP15.24■□□□□ 0.03
SCFD2-201ENST00000388940 URGCPQ8TCY9 931 aa15.24■□□□□ 0.03
SCFD2-201ENST00000388940 HAPLN3Q96S86 360 aa15.24■□□□□ 0.03
SCFD2-201ENST00000388940 PAAF1Q9BRP4 392 aa15.24■□□□□ 0.03
SCFD2-201ENST00000388940 CHRAC1Q9NRG0 131 aa15.24■□□□□ 0.03
SCFD2-201ENST00000388940 PNPOQ9NVS9 261 aa15.24■□□□□ 0.03
SCFD2-201ENST00000388940 NEU3Q9UQ49 428 aa15.24■□□□□ 0.03
SCFD2-201ENST00000388940 AAR2Q9Y312 384 aaKnown RBP15.24■□□□□ 0.03
SCFD2-201ENST00000388940 G3V2L1 256 aa15.24■□□□□ 0.03
SCFD2-201ENST00000388940 M0QZQ0 153 aa15.24■□□□□ 0.03
SCFD2-201ENST00000388940 ATP9BO43861 1147 aa15.24■□□□□ 0.03
SCFD2-201ENST00000388940 HOXC13P31276 330 aa15.24■□□□□ 0.03
SCFD2-201ENST00000388940 CPOXP36551 454 aa15.24■□□□□ 0.03
SCFD2-201ENST00000388940 ITGA9Q13797 1035 aa15.24■□□□□ 0.03
SCFD2-201ENST00000388940 GNASQ5JWF2 1037 aa15.24■□□□□ 0.03
SCFD2-201ENST00000388940 BRMS1LQ5PSV4 323 aa15.24■□□□□ 0.03
SCFD2-201ENST00000388940 PDPK2PQ6A1A2 396 aa15.24■□□□□ 0.03
SCFD2-201ENST00000388940 CD300LGQ6UXG3 332 aa15.24■□□□□ 0.03
SCFD2-201ENST00000388940 CCDC117Q8IWD4 279 aaPredicted RBP15.24■□□□□ 0.03
SCFD2-201ENST00000388940 CNTD1Q8N815 330 aa15.24■□□□□ 0.03
SCFD2-201ENST00000388940 DNAJC9Q8WXX5 260 aa15.24■□□□□ 0.03
SCFD2-201ENST00000388940 ZNF333Q96JL9 665 aa15.24■□□□□ 0.03
SCFD2-201ENST00000388940 FAM161BQ96MY7 647 aa15.24■□□□□ 0.03
SCFD2-201ENST00000388940 PGLYRP2Q96PD5 576 aa15.24■□□□□ 0.03
SCFD2-201ENST00000388940 RHOBTB2Q9BYZ6 727 aa15.24■□□□□ 0.03
SCFD2-201ENST00000388940 C20orf96Q9NUD7 363 aaPredicted RBP15.24■□□□□ 0.03
SCFD2-201ENST00000388940 ZNF358Q9NW07 568 aa15.24■□□□□ 0.03
SCFD2-201ENST00000388940 ZNF212Q9UDV6 495 aa15.24■□□□□ 0.03
SCFD2-201ENST00000388940 MID2Q9UJV3 735 aa15.24■□□□□ 0.03
SCFD2-201ENST00000388940 ANKRD6Q9Y2G4 727 aa15.24■□□□□ 0.03
SCFD2-201ENST00000388940 CDY1Q9Y6F8 540 aa15.24■□□□□ 0.03
SCFD2-201ENST00000388940 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.24■□□□□ 0.03
SCFD2-201ENST00000388940 CIB2O75838 187 aa15.23■□□□□ 0.03
SCFD2-201ENST00000388940 C2P06681 752 aa15.23■□□□□ 0.03
SCFD2-201ENST00000388940 APOA4P06727 396 aa15.23■□□□□ 0.03
SCFD2-201ENST00000388940 BDNFP23560 247 aa15.23■□□□□ 0.03
SCFD2-201ENST00000388940 DNAJB1P25685 340 aa15.23■□□□□ 0.03
SCFD2-201ENST00000388940 THOC5Q13769 683 aaKnown RBP15.23■□□□□ 0.03
SCFD2-201ENST00000388940 BLMHQ13867 455 aa15.23■□□□□ 0.03
SCFD2-201ENST00000388940 MAPRE1Q15691 268 aaKnown RBP15.23■□□□□ 0.03
SCFD2-201ENST00000388940 C6orf163Q5TEZ5 329 aa15.23■□□□□ 0.03
SCFD2-201ENST00000388940 SNX30Q5VWJ9 437 aa15.23■□□□□ 0.03
SCFD2-201ENST00000388940 ULK2Q8IYT8 1036 aa15.23■□□□□ 0.03
SCFD2-201ENST00000388940 TRPV1Q8NER1 839 aa15.23■□□□□ 0.03
SCFD2-201ENST00000388940 SREK1Q8WXA9 508 aaKnown RBP15.23■□□□□ 0.03
SCFD2-201ENST00000388940 GPR22Q99680 433 aa15.23■□□□□ 0.03
SCFD2-201ENST00000388940 NVLO15381 856 aaKnown RBP15.23■□□□□ 0.03
SCFD2-201ENST00000388940 SIN3BO75182 1162 aa15.23■□□□□ 0.03
SCFD2-201ENST00000388940 TBX10O75333 385 aa15.23■□□□□ 0.03
SCFD2-201ENST00000388940 SRGAP2BP0DMP2 458 aa15.23■□□□□ 0.03
SCFD2-201ENST00000388940 NKX3-2P78367 333 aa15.23■□□□□ 0.03
SCFD2-201ENST00000388940 SMAD1Q15797 465 aaKnown RBP15.23■□□□□ 0.03
SCFD2-201ENST00000388940 LZTR1Q8N653 840 aa15.23■□□□□ 0.03
SCFD2-201ENST00000388940 RDH11Q8TC12 318 aa15.23■□□□□ 0.03
SCFD2-201ENST00000388940 RNF34Q969K3 372 aa15.23■□□□□ 0.03
SCFD2-201ENST00000388940 AZIN2Q96A70 460 aa15.23■□□□□ 0.03
SCFD2-201ENST00000388940 VPS39Q96JC1 886 aa15.23■□□□□ 0.03
SCFD2-201ENST00000388940 PPP1R2P1Q96PQ5 205 aa15.23■□□□□ 0.03
SCFD2-201ENST00000388940 FCRL5Q96RD9 977 aa15.23■□□□□ 0.03
SCFD2-201ENST00000388940 IL12RB2Q99665 862 aa15.23■□□□□ 0.03
SCFD2-201ENST00000388940 UPF3AQ9H1J1 476 aaKnown RBP15.23■□□□□ 0.03
SCFD2-201ENST00000388940 AGO3Q9H9G7 860 aaKnown RBP15.23■□□□□ 0.03
SCFD2-201ENST00000388940 IARS2Q9NSE4 1012 aaKnown RBP15.23■□□□□ 0.03
SCFD2-201ENST00000388940 TMLHEQ9NVH6 421 aa15.23■□□□□ 0.03
SCFD2-201ENST00000388940 FGF10O15520 208 aaPredicted RBP15.22■□□□□ 0.03
SCFD2-201ENST00000388940 IRAK2O43187 625 aa15.22■□□□□ 0.03
SCFD2-201ENST00000388940 TRIM13O60858 407 aa15.22■□□□□ 0.03
SCFD2-201ENST00000388940 CTSHP09668 335 aa15.22■□□□□ 0.03
SCFD2-201ENST00000388940 NMBRP28336 390 aa15.22■□□□□ 0.03
SCFD2-201ENST00000388940 POLD2P49005 469 aa15.22■□□□□ 0.03
SCFD2-201ENST00000388940 PRKAA2P54646 552 aa15.22■□□□□ 0.03
SCFD2-201ENST00000388940 ACTR3P61158 418 aa15.22■□□□□ 0.03
SCFD2-201ENST00000388940 ANO4Q32M45 955 aa15.22■□□□□ 0.03
SCFD2-201ENST00000388940 PCID2Q5JVF3 399 aa15.22■□□□□ 0.03
SCFD2-201ENST00000388940 CST9Q5W186 159 aa15.22■□□□□ 0.03
SCFD2-201ENST00000388940 ARHGAP12Q8IWW6 846 aa15.22■□□□□ 0.03
SCFD2-201ENST00000388940 NRG4Q8WWG1 115 aa15.22■□□□□ 0.03
SCFD2-201ENST00000388940 CELF6Q96J87 481 aaKnown RBP15.22■□□□□ 0.03
SCFD2-201ENST00000388940 UROC1Q96N76 676 aa15.22■□□□□ 0.03
SCFD2-201ENST00000388940 THTPAQ9BU02 230 aa15.22■□□□□ 0.03
SCFD2-201ENST00000388940 NMRAL1Q9HBL8 299 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms