RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 C2orf49Q9BVC5 232 aaPredicted RBP12.96□□□□□ -0.33
SMN1-202ENST00000380707 DTLQ9NZJ0 730 aa12.96□□□□□ -0.33
SMN1-202ENST00000380707 SAE1Q9UBE0 346 aaPredicted RBP12.96□□□□□ -0.33
SMN1-202ENST00000380707 VPS51Q9UID3 782 aa12.96□□□□□ -0.33
SMN1-202ENST00000380707 SIT1Q9Y3P8 196 aa12.96□□□□□ -0.33
SMN1-202ENST00000380707 CHD5Q8TDI0 1954 aa12.95□□□□□ -0.34
SMN1-202ENST00000380707 CBX4O00257 560 aa12.95□□□□□ -0.34
SMN1-202ENST00000380707 ZMPSTE24O75844 475 aa12.95□□□□□ -0.34
SMN1-202ENST00000380707 MT-CO1P00395 513 aa12.95□□□□□ -0.34
SMN1-202ENST00000380707 ATP5BP06576 529 aaKnown RBP12.95□□□□□ -0.34
SMN1-202ENST00000380707 DCNP07585 359 aaKnown RBP12.95□□□□□ -0.34
SMN1-202ENST00000380707 DLDP09622 509 aaKnown RBP12.95□□□□□ -0.34
SMN1-202ENST00000380707 ZFXP17010 805 aaPredicted RBP12.95□□□□□ -0.34
SMN1-202ENST00000380707 TIE1P35590 1138 aa12.95□□□□□ -0.34
SMN1-202ENST00000380707 ETFBP38117 255 aa12.95□□□□□ -0.34
SMN1-202ENST00000380707 STK19P49842 368 aaPredicted RBP12.95□□□□□ -0.34
SMN1-202ENST00000380707 TFDP2Q14188 446 aa12.95□□□□□ -0.34
SMN1-202ENST00000380707 FBXO43Q4G163 708 aa12.95□□□□□ -0.34
SMN1-202ENST00000380707 DGKKQ5KSL6 1271 aa12.95□□□□□ -0.34
SMN1-202ENST00000380707 LINGO4Q6UY18 593 aa12.95□□□□□ -0.34
SMN1-202ENST00000380707 Q6ZS52 159 aa12.95□□□□□ -0.34
SMN1-202ENST00000380707 ZNF354CQ86Y25 554 aa12.95□□□□□ -0.34
SMN1-202ENST00000380707 ZNF513Q8N8E2 541 aaPredicted RBP12.95□□□□□ -0.34
SMN1-202ENST00000380707 DCAF4L2Q8NA75 395 aa12.95□□□□□ -0.34
SMN1-202ENST00000380707 CLDN23Q96B33 292 aa12.95□□□□□ -0.34
SMN1-202ENST00000380707 RPL10LQ96L21 214 aaKnown RBP12.95□□□□□ -0.34
SMN1-202ENST00000380707 MRGPRX3Q96LB0 322 aa12.95□□□□□ -0.34
SMN1-202ENST00000380707 ACOX2Q99424 681 aa12.95□□□□□ -0.34
SMN1-202ENST00000380707 OSBPL6Q9BZF3 934 aa12.95□□□□□ -0.34
SMN1-202ENST00000380707 CARD9Q9H257 536 aa12.95□□□□□ -0.34
SMN1-202ENST00000380707 PRDM16Q9HAZ2 1276 aa12.95□□□□□ -0.34
SMN1-202ENST00000380707 PLA2G4CQ9UP65 541 aa12.95□□□□□ -0.34
SMN1-202ENST00000380707 ERVW-1Q9UQF0 538 aa12.95□□□□□ -0.34
SMN1-202ENST00000380707 EFR3BQ9Y2G0 817 aa12.95□□□□□ -0.34
SMN1-202ENST00000380707 HEY1Q9Y5J3 304 aa12.95□□□□□ -0.34
SMN1-202ENST00000380707 VPS13AQ96RL7 3174 aa12.95□□□□□ -0.34
SMN1-202ENST00000380707 USP34Q70CQ2 3546 aa12.94□□□□□ -0.34
SMN1-202ENST00000380707 MYO15AQ9UKN7 3530 aa12.94□□□□□ -0.34
SMN1-202ENST00000380707 TCRBV7S2A1N4TA0A589 114 aa12.94□□□□□ -0.34
SMN1-202ENST00000380707 ARHGAP42A6NI28 874 aa12.94□□□□□ -0.34
SMN1-202ENST00000380707 WASH3PC4AMC7 463 aa12.94□□□□□ -0.34
SMN1-202ENST00000380707 J3KR12 359 aa12.94□□□□□ -0.34
SMN1-202ENST00000380707 KDELR3O43731 214 aa12.94□□□□□ -0.34
SMN1-202ENST00000380707 HNRNPLP14866 589 aaKnown RBP eCLIP12.94□□□□□ -0.34
SMN1-202ENST00000380707 PECAM1P16284 738 aaPredicted RBP12.94□□□□□ -0.34
SMN1-202ENST00000380707 CETN2P41208 172 aa12.94□□□□□ -0.34
SMN1-202ENST00000380707 ARF5P84085 180 aa12.94□□□□□ -0.34
SMN1-202ENST00000380707 SULT2A1Q06520 285 aa12.94□□□□□ -0.34
SMN1-202ENST00000380707 LRRC32Q14392 662 aa12.94□□□□□ -0.34
SMN1-202ENST00000380707 GAS6Q14393 721 aa12.94□□□□□ -0.34
SMN1-202ENST00000380707 PKN3Q6P5Z2 889 aa12.94□□□□□ -0.34
SMN1-202ENST00000380707 LEKR1Q6ZMV7 388 aa12.94□□□□□ -0.34
SMN1-202ENST00000380707 NYAP1Q6ZVC0 841 aa12.94□□□□□ -0.34
SMN1-202ENST00000380707 BBS12Q6ZW61 710 aa12.94□□□□□ -0.34
SMN1-202ENST00000380707 SYNPOQ8N3V7 929 aa12.94□□□□□ -0.34
SMN1-202ENST00000380707 ALLCQ8N6M5 410 aa12.94□□□□□ -0.34
SMN1-202ENST00000380707 IL17RCQ8NAC3 791 aa12.94□□□□□ -0.34
SMN1-202ENST00000380707 RPLP0P6Q8NHW5 317 aa12.94□□□□□ -0.34
SMN1-202ENST00000380707 USP33Q8TEY7 942 aa12.94□□□□□ -0.34
SMN1-202ENST00000380707 LRRN4Q8WUT4 740 aa12.94□□□□□ -0.34
SMN1-202ENST00000380707 UCMAQ8WVF2 138 aa12.94□□□□□ -0.34
SMN1-202ENST00000380707 ACDQ96AP0 544 aa12.94□□□□□ -0.34
SMN1-202ENST00000380707 PBXIP1Q96AQ6 731 aa12.94□□□□□ -0.34
SMN1-202ENST00000380707 MYO19Q96H55 970 aa12.94□□□□□ -0.34
SMN1-202ENST00000380707 THAP10Q9P2Z0 257 aaPredicted RBP12.94□□□□□ -0.34
SMN1-202ENST00000380707 SLCO3A1Q9UIG8 710 aa12.94□□□□□ -0.34
SMN1-202ENST00000380707 HPCAL4Q9UM19 191 aa12.94□□□□□ -0.34
SMN1-202ENST00000380707 ACTL7AQ9Y615 435 aa12.94□□□□□ -0.34
SMN1-202ENST00000380707 ATG2BQ96BY7 2078 aa12.94□□□□□ -0.34
SMN1-202ENST00000380707 ZDBF2Q9HCK1 2354 aa12.94□□□□□ -0.34
SMN1-202ENST00000380707 K7ERQ8 282 aa12.93□□□□□ -0.34
SMN1-202ENST00000380707 NCAM2O15394 837 aa12.93□□□□□ -0.34
SMN1-202ENST00000380707 CD160O95971 181 aa12.93□□□□□ -0.34
SMN1-202ENST00000380707 ASLP04424 464 aa12.93□□□□□ -0.34
SMN1-202ENST00000380707 AOC1P19801 751 aa12.93□□□□□ -0.34
SMN1-202ENST00000380707 TGM2P21980 687 aa12.93□□□□□ -0.34
SMN1-202ENST00000380707 DEKP35659 375 aaKnown RBP12.93□□□□□ -0.34
SMN1-202ENST00000380707 ETF1P62495 437 aaKnown RBP12.93□□□□□ -0.34
SMN1-202ENST00000380707 MRPS21P82921 87 aaKnown RBP12.93□□□□□ -0.34
SMN1-202ENST00000380707 GALNT2Q10471 571 aa12.93□□□□□ -0.34
SMN1-202ENST00000380707 KLF1Q13351 362 aaPredicted RBP12.93□□□□□ -0.34
SMN1-202ENST00000380707 ZNF234Q14588 700 aa12.93□□□□□ -0.34
SMN1-202ENST00000380707 SEL1L2Q5TEA6 688 aa12.93□□□□□ -0.34
SMN1-202ENST00000380707 KCNV2Q8TDN2 545 aa12.93□□□□□ -0.34
SMN1-202ENST00000380707 HAUS1Q96CS2 278 aa12.93□□□□□ -0.34
SMN1-202ENST00000380707 C11orf16Q9NQ32 467 aa12.93□□□□□ -0.34
SMN1-202ENST00000380707 POLR3BQ9NW08 1133 aaPredicted RBP12.93□□□□□ -0.34
SMN1-202ENST00000380707 CACNA2D2Q9NY47 1150 aa12.93□□□□□ -0.34
SMN1-202ENST00000380707 DLGAP2Q9P1A6 1054 aa12.93□□□□□ -0.34
SMN1-202ENST00000380707 SNX12Q9UMY4 172 aa12.93□□□□□ -0.34
SMN1-202ENST00000380707 MYO18AQ92614 2054 aaKnown RBP12.93□□□□□ -0.34
SMN1-202ENST00000380707 NYNRINQ9P2P1 1898 aaKnown RBP12.93□□□□□ -0.34
SMN1-202ENST00000380707 FAM86C2PA6NEL3 165 aa12.93□□□□□ -0.34
SMN1-202ENST00000380707 APOC4-APOC2K7ER74 178 aa12.93□□□□□ -0.34
SMN1-202ENST00000380707 SMAD6O43541 496 aaKnown RBP12.93□□□□□ -0.34
SMN1-202ENST00000380707 MAFKO60675 156 aa12.93□□□□□ -0.34
SMN1-202ENST00000380707 PRAMEF11O60813 436 aa12.93□□□□□ -0.34
SMN1-202ENST00000380707 ADAM23O75077 832 aa12.93□□□□□ -0.34
SMN1-202ENST00000380707 TJP3O95049 919 aa12.93□□□□□ -0.34
SMN1-202ENST00000380707 KLF8O95600 359 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms