RNA–Protein interactions for RNA: ENST00000378409.7

CCDC107-204, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 1,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-204ENST00000378409 CCNCP24863 283 aa16.13■□□□□ 0.17
CCDC107-204ENST00000378409 STIP1P31948 543 aaKnown RBP16.13■□□□□ 0.17
CCDC107-204ENST00000378409 CD70P32970 193 aa16.13■□□□□ 0.17
CCDC107-204ENST00000378409 CLCN6P51797 869 aa16.13■□□□□ 0.17
CCDC107-204ENST00000378409 ZNF33AQ06730 810 aa16.13■□□□□ 0.17
CCDC107-204ENST00000378409 TRIP13Q15645 432 aaPredicted RBP16.13■□□□□ 0.17
CCDC107-204ENST00000378409 TIGD7Q6NT04 549 aaPredicted RBP16.13■□□□□ 0.17
CCDC107-204ENST00000378409 JAMLQ86YT9 394 aa16.13■□□□□ 0.17
CCDC107-204ENST00000378409 CCDC89Q8N998 374 aa16.13■□□□□ 0.17
CCDC107-204ENST00000378409 SLCO2A1Q92959 643 aa16.13■□□□□ 0.17
CCDC107-204ENST00000378409 TSGA13Q96PP4 275 aa16.13■□□□□ 0.17
CCDC107-204ENST00000378409 RHOXF2Q9BQY4 288 aa16.13■□□□□ 0.17
CCDC107-204ENST00000378409 TRIM51Q9BSJ1 452 aa16.13■□□□□ 0.17
CCDC107-204ENST00000378409 FEM1AQ9BSK4 669 aa16.13■□□□□ 0.17
CCDC107-204ENST00000378409 SLC2A11Q9BYW1 496 aa16.13■□□□□ 0.17
CCDC107-204ENST00000378409 KCNK12Q9HB15 430 aa16.13■□□□□ 0.17
CCDC107-204ENST00000378409 USP29Q9HBJ7 922 aa16.13■□□□□ 0.17
CCDC107-204ENST00000378409 DNAJC17Q9NVM6 304 aaKnown RBP16.13■□□□□ 0.17
CCDC107-204ENST00000378409 GTSE1Q9NYZ3 720 aa16.13■□□□□ 0.17
CCDC107-204ENST00000378409 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.13■□□□□ 0.17
CCDC107-204ENST00000378409 HPCAL4Q9UM19 191 aa16.13■□□□□ 0.17
CCDC107-204ENST00000378409 V9GYY5 206 aaPredicted RBP16.13■□□□□ 0.17
CCDC107-204ENST00000378409 FAM187AA6NFU0 413 aa16.12■□□□□ 0.17
CCDC107-204ENST00000378409 J3KR12 359 aa16.12■□□□□ 0.17
CCDC107-204ENST00000378409 RNF103O00237 685 aa16.12■□□□□ 0.17
CCDC107-204ENST00000378409 CBX4O00257 560 aa16.12■□□□□ 0.17
CCDC107-204ENST00000378409 MTSS1O43312 755 aa16.12■□□□□ 0.17
CCDC107-204ENST00000378409 KDELR3O43731 214 aa16.12■□□□□ 0.17
CCDC107-204ENST00000378409 ZNF189O75820 626 aaPredicted RBP16.12■□□□□ 0.17
CCDC107-204ENST00000378409 STK10O94804 968 aaKnown RBP16.12■□□□□ 0.17
CCDC107-204ENST00000378409 KRT14P02533 472 aa16.12■□□□□ 0.17
CCDC107-204ENST00000378409 ETS1P14921 441 aa16.12■□□□□ 0.17
CCDC107-204ENST00000378409 GLDCP23378 1020 aa16.12■□□□□ 0.17
CCDC107-204ENST00000378409 HLA-FP30511 346 aa16.12■□□□□ 0.17
CCDC107-204ENST00000378409 SLC7A5Q01650 507 aa16.12■□□□□ 0.17
CCDC107-204ENST00000378409 IL10RBQ08334 325 aa16.12■□□□□ 0.17
CCDC107-204ENST00000378409 SLC12A1Q13621 1099 aa16.12■□□□□ 0.17
CCDC107-204ENST00000378409 GAB4Q2WGN9 574 aa16.12■□□□□ 0.17
CCDC107-204ENST00000378409 ITPRIPL2Q3MIP1 535 aa16.12■□□□□ 0.17
CCDC107-204ENST00000378409 GLE1Q53GS7 698 aaKnown RBP16.12■□□□□ 0.17
CCDC107-204ENST00000378409 FAM182AQ5T1J6 154 aa16.12■□□□□ 0.17
CCDC107-204ENST00000378409 ASTLQ6HA08 431 aaPredicted RBP16.12■□□□□ 0.17
CCDC107-204ENST00000378409 LEKR1Q6ZMV7 388 aa16.12■□□□□ 0.17
CCDC107-204ENST00000378409 PRUNE1Q86TP1 453 aa16.12■□□□□ 0.17
CCDC107-204ENST00000378409 C12orf40Q86WS4 652 aa16.12■□□□□ 0.17
CCDC107-204ENST00000378409 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.12■□□□□ 0.17
CCDC107-204ENST00000378409 APCDD1Q8J025 514 aa16.12■□□□□ 0.17
CCDC107-204ENST00000378409 GLIS1Q8NBF1 620 aa16.12■□□□□ 0.17
CCDC107-204ENST00000378409 CSGALNACT1Q8TDX6 532 aa16.12■□□□□ 0.17
CCDC107-204ENST00000378409 UBXN4Q92575 508 aa16.12■□□□□ 0.17
CCDC107-204ENST00000378409 ACE2Q9BYF1 805 aaPredicted RBP16.12■□□□□ 0.17
CCDC107-204ENST00000378409 IGSF9Q9P2J2 1179 aa16.12■□□□□ 0.17
CCDC107-204ENST00000378409 GGA2Q9UJY4 613 aa16.12■□□□□ 0.17
CCDC107-204ENST00000378409 OR51B4Q9Y5P0 310 aa16.12■□□□□ 0.17
CCDC107-204ENST00000378409 ANKRD36A6QL64 1941 aa16.11■□□□□ 0.17
CCDC107-204ENST00000378409 CUL9Q8IWT3 2517 aa16.11■□□□□ 0.17
CCDC107-204ENST00000378409 ARNTLO00327 626 aa16.11■□□□□ 0.17
CCDC107-204ENST00000378409 MATN3O15232 486 aa16.11■□□□□ 0.17
CCDC107-204ENST00000378409 SNAP91O60641 907 aa16.11■□□□□ 0.17
CCDC107-204ENST00000378409 PRAMEF11O60813 436 aa16.11■□□□□ 0.17
CCDC107-204ENST00000378409 ASGR2P07307 311 aa16.11■□□□□ 0.17
CCDC107-204ENST00000378409 PABPC1P11940 636 aaKnown RBP16.11■□□□□ 0.17
CCDC107-204ENST00000378409 DGKGP49619 791 aa16.11■□□□□ 0.17
CCDC107-204ENST00000378409 VPS41P49754 854 aa16.11■□□□□ 0.17
CCDC107-204ENST00000378409 NRLP54845 237 aa16.11■□□□□ 0.17
CCDC107-204ENST00000378409 TUBB4BP68371 445 aa16.11■□□□□ 0.17
CCDC107-204ENST00000378409 PTK6Q13882 451 aa16.11■□□□□ 0.17
CCDC107-204ENST00000378409 PLEKHG6Q3KR16 790 aa16.11■□□□□ 0.17
CCDC107-204ENST00000378409 PITRM1Q5JRX3 1037 aa16.11■□□□□ 0.17
CCDC107-204ENST00000378409 SYDE1Q6ZW31 735 aaPredicted RBP16.11■□□□□ 0.17
CCDC107-204ENST00000378409 USP33Q8TEY7 942 aa16.11■□□□□ 0.17
CCDC107-204ENST00000378409 NSMCE1Q8WV22 266 aa16.11■□□□□ 0.17
CCDC107-204ENST00000378409 NXPE3Q969Y0 559 aa16.11■□□□□ 0.17
CCDC107-204ENST00000378409 ALG14Q96F25 216 aa16.11■□□□□ 0.17
CCDC107-204ENST00000378409 LMLNQ96KR4 655 aa16.11■□□□□ 0.17
CCDC107-204ENST00000378409 C2orf49Q9BVC5 232 aaPredicted RBP16.11■□□□□ 0.17
CCDC107-204ENST00000378409 CEP41Q9BYV8 373 aa16.11■□□□□ 0.17
CCDC107-204ENST00000378409 PCDH9Q9HC56 1237 aa16.11■□□□□ 0.17
CCDC107-204ENST00000378409 XIRP2A4UGR9 3374 aa16.11■□□□□ 0.17
CCDC107-204ENST00000378409 SPTBN5Q9NRC6 3674 aaKnown RBP16.11■□□□□ 0.17
CCDC107-204ENST00000378409 TCF20Q9UGU0 1960 aaKnown RBP16.11■□□□□ 0.17
CCDC107-204ENST00000378409 TRIM24O15164 1050 aa16.1■□□□□ 0.17
CCDC107-204ENST00000378409 TULP3O75386 442 aa16.1■□□□□ 0.17
CCDC107-204ENST00000378409 HEXIM1O94992 359 aaKnown RBP16.1■□□□□ 0.17
CCDC107-204ENST00000378409 JCHAINP01591 159 aa16.1■□□□□ 0.17
CCDC107-204ENST00000378409 ZSCAN5DPP0CG00 497 aa16.1■□□□□ 0.17
CCDC107-204ENST00000378409 CCNB1P14635 433 aa16.1■□□□□ 0.17
CCDC107-204ENST00000378409 PTPN3P26045 913 aa16.1■□□□□ 0.17
CCDC107-204ENST00000378409 GJA4P35212 333 aa16.1■□□□□ 0.17
CCDC107-204ENST00000378409 ACTN2P35609 894 aa16.1■□□□□ 0.17
CCDC107-204ENST00000378409 SLC6A11P48066 632 aa16.1■□□□□ 0.17
CCDC107-204ENST00000378409 PLK1P53350 603 aa16.1■□□□□ 0.17
CCDC107-204ENST00000378409 IFI35P80217 286 aaPredicted RBP16.1■□□□□ 0.17
CCDC107-204ENST00000378409 KDSRQ06136 332 aa16.1■□□□□ 0.17
CCDC107-204ENST00000378409 WASHC5Q12768 1159 aa16.1■□□□□ 0.17
CCDC107-204ENST00000378409 ZBTB17Q13105 803 aa16.1■□□□□ 0.17
CCDC107-204ENST00000378409 ERCC6LQ2NKX8 1250 aa16.1■□□□□ 0.17
CCDC107-204ENST00000378409 FUT11Q495W5 492 aa16.1■□□□□ 0.17
CCDC107-204ENST00000378409 ETFBKMTQ8IXQ9 262 aa16.1■□□□□ 0.17
CCDC107-204ENST00000378409 SLC44A3Q8N4M1 653 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms