RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 PSMB7Q99436 277 aa12.31□□□□□ -0.44
HDAC8-201ENST00000373554 MAGEB5Q9BZ81 275 aa12.31□□□□□ -0.44
HDAC8-201ENST00000373554 RSPH9Q9H1X1 276 aaPredicted RBP12.31□□□□□ -0.44
HDAC8-201ENST00000373554 ITM2CQ9NQX7 267 aa12.31□□□□□ -0.44
HDAC8-201ENST00000373554 SPTLC3Q9NUV7 552 aa12.31□□□□□ -0.44
HDAC8-201ENST00000373554 DONSONQ9NYP3 566 aa12.31□□□□□ -0.44
HDAC8-201ENST00000373554 LCMT1Q9UIC8 334 aa12.31□□□□□ -0.44
HDAC8-201ENST00000373554 MBD1Q9UIS9 605 aaPredicted RBP12.31□□□□□ -0.44
HDAC8-201ENST00000373554 HPCAL4Q9UM19 191 aa12.31□□□□□ -0.44
HDAC8-201ENST00000373554 PLXND1Q9Y4D7 1925 aa12.31□□□□□ -0.44
HDAC8-201ENST00000373554 EEF2KO00418 725 aaKnown RBP12.3□□□□□ -0.44
HDAC8-201ENST00000373554 ATP9BO43861 1147 aa12.3□□□□□ -0.44
HDAC8-201ENST00000373554 SNAP91O60641 907 aa12.3□□□□□ -0.44
HDAC8-201ENST00000373554 IGLV3-19P01714 112 aa12.3□□□□□ -0.44
HDAC8-201ENST00000373554 CD6P30203 668 aa12.3□□□□□ -0.44
HDAC8-201ENST00000373554 OXTRP30559 389 aa12.3□□□□□ -0.44
HDAC8-201ENST00000373554 MPLP40238 635 aa12.3□□□□□ -0.44
HDAC8-201ENST00000373554 DHPSP49366 369 aaPredicted RBP12.3□□□□□ -0.44
HDAC8-201ENST00000373554 CLCN6P51797 869 aa12.3□□□□□ -0.44
HDAC8-201ENST00000373554 ZNF135P52742 658 aaPredicted RBP12.3□□□□□ -0.44
HDAC8-201ENST00000373554 GEMIN4P57678 1058 aaKnown RBP12.3□□□□□ -0.44
HDAC8-201ENST00000373554 RPS14P62263 151 aaKnown RBP12.3□□□□□ -0.44
HDAC8-201ENST00000373554 CREB5Q02930 508 aa12.3□□□□□ -0.44
HDAC8-201ENST00000373554 SFSWAPQ12872 951 aaKnown RBP12.3□□□□□ -0.44
HDAC8-201ENST00000373554 DLG2Q15700 870 aa12.3□□□□□ -0.44
HDAC8-201ENST00000373554 PPP6R3Q5H9R7 873 aaPredicted RBP12.3□□□□□ -0.44
HDAC8-201ENST00000373554 ZNF354CQ86Y25 554 aa12.3□□□□□ -0.44
HDAC8-201ENST00000373554 FRS2Q8WU20 508 aa12.3□□□□□ -0.44
HDAC8-201ENST00000373554 PTPRN2Q92932 1015 aa12.3□□□□□ -0.44
HDAC8-201ENST00000373554 TOE1Q96GM8 510 aaKnown RBP12.3□□□□□ -0.44
HDAC8-201ENST00000373554 BTBD6Q96KE9 485 aa12.3□□□□□ -0.44
HDAC8-201ENST00000373554 PACSIN1Q9BY11 444 aa12.3□□□□□ -0.44
HDAC8-201ENST00000373554 MAGEH1Q9H213 219 aa12.3□□□□□ -0.44
HDAC8-201ENST00000373554 ARRDC1-AS1Q9H2J1 176 aa12.3□□□□□ -0.44
HDAC8-201ENST00000373554 ZWILCHQ9H900 591 aa12.3□□□□□ -0.44
HDAC8-201ENST00000373554 CD93Q9NPY3 652 aa12.3□□□□□ -0.44
HDAC8-201ENST00000373554 NDFIP2Q9NV92 336 aa12.3□□□□□ -0.44
HDAC8-201ENST00000373554 SCML1Q9UN30 329 aa12.3□□□□□ -0.44
HDAC8-201ENST00000373554 DOCK4Q8N1I0 1966 aa12.3□□□□□ -0.44
HDAC8-201ENST00000373554 RIF1Q5UIP0 2472 aaKnown RBP12.3□□□□□ -0.44
HDAC8-201ENST00000373554 DMDP11532 3685 aa12.3□□□□□ -0.44
HDAC8-201ENST00000373554 USP34Q70CQ2 3546 aa12.29□□□□□ -0.44
HDAC8-201ENST00000373554 SPAG17Q6Q759 2223 aa12.29□□□□□ -0.44
HDAC8-201ENST00000373554 CXorf51AA0A1B0GTR3 108 aa12.29□□□□□ -0.44
HDAC8-201ENST00000373554 DAPK3O43293 454 aa12.29□□□□□ -0.44
HDAC8-201ENST00000373554 BNIP3LO60238 219 aa12.29□□□□□ -0.44
HDAC8-201ENST00000373554 FOXD2O60548 495 aaPredicted RBP12.29□□□□□ -0.44
HDAC8-201ENST00000373554 ADH1BP00325 375 aa12.29□□□□□ -0.44
HDAC8-201ENST00000373554 C7P10643 843 aa12.29□□□□□ -0.44
HDAC8-201ENST00000373554 SRCP12931 536 aa12.29□□□□□ -0.44
HDAC8-201ENST00000373554 VAV1P15498 845 aa12.29□□□□□ -0.44
HDAC8-201ENST00000373554 GLDCP23378 1020 aa12.29□□□□□ -0.44
HDAC8-201ENST00000373554 ACVRL1P37023 503 aa12.29□□□□□ -0.44
HDAC8-201ENST00000373554 DPP6P42658 865 aa12.29□□□□□ -0.44
HDAC8-201ENST00000373554 SSR1P43307 286 aaKnown RBP12.29□□□□□ -0.44
HDAC8-201ENST00000373554 SERPINH1P50454 418 aaKnown RBP12.29□□□□□ -0.44
HDAC8-201ENST00000373554 YBEYP58557 167 aaPredicted RBP12.29□□□□□ -0.44
HDAC8-201ENST00000373554 SLC20A2Q08357 652 aa12.29□□□□□ -0.44
HDAC8-201ENST00000373554 POLD3Q15054 466 aaPredicted RBP12.29□□□□□ -0.44
HDAC8-201ENST00000373554 CST6Q15828 149 aa12.29□□□□□ -0.44
HDAC8-201ENST00000373554 CA9Q16790 459 aa12.29□□□□□ -0.44
HDAC8-201ENST00000373554 HADHQ16836 314 aaKnown RBP12.29□□□□□ -0.44
HDAC8-201ENST00000373554 SMTNL2Q2TAL5 461 aa12.29□□□□□ -0.44
HDAC8-201ENST00000373554 PARP15Q460N3 678 aa12.29□□□□□ -0.44
HDAC8-201ENST00000373554 BOLA3Q53S33 107 aa12.29□□□□□ -0.44
HDAC8-201ENST00000373554 KCNT1Q5JUK3 1230 aa12.29□□□□□ -0.44
HDAC8-201ENST00000373554 DAB2IPQ5VWQ8 1189 aa12.29□□□□□ -0.44
HDAC8-201ENST00000373554 LYSMD4Q5XG99 296 aa12.29□□□□□ -0.44
HDAC8-201ENST00000373554 C22orf39Q6P5X5 142 aa12.29□□□□□ -0.44
HDAC8-201ENST00000373554 LINGO4Q6UY18 593 aa12.29□□□□□ -0.44
HDAC8-201ENST00000373554 Q6ZVU0 165 aa12.29□□□□□ -0.44
HDAC8-201ENST00000373554 ARMCX6Q7L4S7 300 aa12.29□□□□□ -0.44
HDAC8-201ENST00000373554 FAM124AQ86V42 546 aa12.29□□□□□ -0.44
HDAC8-201ENST00000373554 MMAAQ8IVH4 418 aaKnown RBP12.29□□□□□ -0.44
HDAC8-201ENST00000373554 RHOT2Q8IXI1 618 aa12.29□□□□□ -0.44
HDAC8-201ENST00000373554 KIAA2013Q8IYS2 634 aa12.29□□□□□ -0.44
HDAC8-201ENST00000373554 STK40Q8N2I9 435 aa12.29□□□□□ -0.44
HDAC8-201ENST00000373554 GANCQ8TET4 914 aa12.29□□□□□ -0.44
HDAC8-201ENST00000373554 OR8D1Q8WZ84 308 aa12.29□□□□□ -0.44
HDAC8-201ENST00000373554 ARHGEF2Q92974 986 aaKnown RBP12.29□□□□□ -0.44
HDAC8-201ENST00000373554 ACE2Q9BYF1 805 aaPredicted RBP12.29□□□□□ -0.44
HDAC8-201ENST00000373554 PABPC3Q9H361 631 aaKnown RBP12.29□□□□□ -0.44
HDAC8-201ENST00000373554 SEMA4GQ9NTN9 838 aa12.29□□□□□ -0.44
HDAC8-201ENST00000373554 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.29□□□□□ -0.44
HDAC8-201ENST00000373554 NCKAP1Q9Y2A7 1128 aa12.29□□□□□ -0.44
HDAC8-201ENST00000373554 FARP1Q9Y4F1 1045 aaPredicted RBP12.29□□□□□ -0.44
HDAC8-201ENST00000373554 FAM186AA6NE01 2351 aa12.29□□□□□ -0.44
HDAC8-201ENST00000373554 GVINP1Q7Z2Y8 2422 aa12.29□□□□□ -0.44
HDAC8-201ENST00000373554 EP300Q09472 2414 aaPredicted RBP12.28□□□□□ -0.44
HDAC8-201ENST00000373554 NYNRINQ9P2P1 1898 aaKnown RBP12.28□□□□□ -0.44
HDAC8-201ENST00000373554 BCLAF3A2AJT9 711 aaKnown RBP12.28□□□□□ -0.44
HDAC8-201ENST00000373554 ZSCAN5CA6NGD5 496 aaPredicted RBP12.28□□□□□ -0.44
HDAC8-201ENST00000373554 WASH4PA8MWX3 477 aa12.28□□□□□ -0.44
HDAC8-201ENST00000373554 C1QTNF3-AMACRE9PGA6 284 aa12.28□□□□□ -0.44
HDAC8-201ENST00000373554 H3BRJ5 948 aa12.28□□□□□ -0.44
HDAC8-201ENST00000373554 ALOX15BO15296 676 aa12.28□□□□□ -0.44
HDAC8-201ENST00000373554 ZMPSTE24O75844 475 aa12.28□□□□□ -0.44
HDAC8-201ENST00000373554 PROSCO94903 275 aa12.28□□□□□ -0.44
HDAC8-201ENST00000373554 MT-CO1P00395 513 aa12.28□□□□□ -0.44
HDAC8-201ENST00000373554 IL1BP01584 269 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms