RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 MYO1HQ8N1T3 1032 aa13.95□□□□□ -0.18
USP49-201ENST00000373006 CATSPER1Q8NEC5 780 aa13.95□□□□□ -0.18
USP49-201ENST00000373006 DDI1Q8WTU0 396 aa13.95□□□□□ -0.18
USP49-201ENST00000373006 MFSD3Q96ES6 412 aa13.95□□□□□ -0.18
USP49-201ENST00000373006 VPS33BQ9H267 617 aa13.95□□□□□ -0.18
USP49-201ENST00000373006 TIMMDC1Q9NPL8 285 aa13.95□□□□□ -0.18
USP49-201ENST00000373006 PLK2Q9NYY3 685 aa13.95□□□□□ -0.18
USP49-201ENST00000373006 BTBD19C9JJ37 291 aa13.95□□□□□ -0.18
USP49-201ENST00000373006 HDAC3O15379 428 aa13.95□□□□□ -0.18
USP49-201ENST00000373006 HCRTO43612 131 aa13.95□□□□□ -0.18
USP49-201ENST00000373006 MFSD11O43934 449 aa13.95□□□□□ -0.18
USP49-201ENST00000373006 MLNP12872 115 aa13.95□□□□□ -0.18
USP49-201ENST00000373006 LCP1P13796 627 aa13.95□□□□□ -0.18
USP49-201ENST00000373006 DPEP1P16444 411 aa13.95□□□□□ -0.18
USP49-201ENST00000373006 RPL14P50914 215 aaKnown RBP13.95□□□□□ -0.18
USP49-201ENST00000373006 CDH15P55291 814 aa13.95□□□□□ -0.18
USP49-201ENST00000373006 NAA20P61599 178 aa13.95□□□□□ -0.18
USP49-201ENST00000373006 Q3C1V9 767 aa13.95□□□□□ -0.18
USP49-201ENST00000373006 MGAT5BQ3V5L5 792 aa13.95□□□□□ -0.18
USP49-201ENST00000373006 GRTP1Q5TC63 336 aa13.95□□□□□ -0.18
USP49-201ENST00000373006 FAM160B1Q5W0V3 765 aa13.95□□□□□ -0.18
USP49-201ENST00000373006 TMEM102Q8N9M5 508 aaPredicted RBP13.95□□□□□ -0.18
USP49-201ENST00000373006 RNF169Q8NCN4 708 aa13.95□□□□□ -0.18
USP49-201ENST00000373006 RBBP8Q99708 897 aa13.95□□□□□ -0.18
USP49-201ENST00000373006 CPNE1Q99829 537 aa13.95□□□□□ -0.18
USP49-201ENST00000373006 APOL2Q9BQE5 337 aa13.95□□□□□ -0.18
USP49-201ENST00000373006 DCUN1D5Q9BTE7 237 aa13.95□□□□□ -0.18
USP49-201ENST00000373006 TASP1Q9H6P5 420 aa13.95□□□□□ -0.18
USP49-201ENST00000373006 RNF19AQ9NV58 838 aa13.95□□□□□ -0.18
USP49-201ENST00000373006 FIS1Q9Y3D6 152 aa13.95□□□□□ -0.18
USP49-201ENST00000373006 PTPRFP10586 1907 aa13.95□□□□□ -0.18
USP49-201ENST00000373006 TRIP11Q15643 1979 aa13.95□□□□□ -0.18
USP49-201ENST00000373006 PRSS51A0A1B0GVH4 220 aa13.95□□□□□ -0.18
USP49-201ENST00000373006 KPNA7A9QM74 516 aa13.95□□□□□ -0.18
USP49-201ENST00000373006 TMEM233B4DJY2 109 aa13.95□□□□□ -0.18
USP49-201ENST00000373006 ZNF26P17031 533 aaPredicted RBP13.95□□□□□ -0.18
USP49-201ENST00000373006 SPRP35270 261 aaPredicted RBP13.95□□□□□ -0.18
USP49-201ENST00000373006 PPARGP37231 505 aaPredicted RBP13.95□□□□□ -0.18
USP49-201ENST00000373006 AVPR1AP37288 418 aa13.95□□□□□ -0.18
USP49-201ENST00000373006 NR2C2P49116 596 aa13.95□□□□□ -0.18
USP49-201ENST00000373006 C16orf72Q14CZ0 275 aa13.95□□□□□ -0.18
USP49-201ENST00000373006 HSDL1Q3SXM5 330 aa13.95□□□□□ -0.18
USP49-201ENST00000373006 PID1Q7Z2X4 250 aa13.95□□□□□ -0.18
USP49-201ENST00000373006 SPATA6LQ8N4H0 392 aa13.95□□□□□ -0.18
USP49-201ENST00000373006 URGCPQ8TCY9 931 aa13.95□□□□□ -0.18
USP49-201ENST00000373006 LRTOMTQ8WZ04 291 aa13.95□□□□□ -0.18
USP49-201ENST00000373006 RSL24D1Q9UHA3 163 aaKnown RBP13.95□□□□□ -0.18
USP49-201ENST00000373006 SLC39A10Q9ULF5 831 aa13.95□□□□□ -0.18
USP49-201ENST00000373006 GMEB1Q9Y692 573 aa13.95□□□□□ -0.18
USP49-201ENST00000373006 GRID2O43424 1007 aa13.94□□□□□ -0.18
USP49-201ENST00000373006 ARSAP15289 507 aa13.94□□□□□ -0.18
USP49-201ENST00000373006 AMHR2Q16671 573 aa13.94□□□□□ -0.18
USP49-201ENST00000373006 SOWAHAQ2M3V2 549 aa13.94□□□□□ -0.18
USP49-201ENST00000373006 PGAM4Q8N0Y7 254 aa13.94□□□□□ -0.18
USP49-201ENST00000373006 DNAAF3Q8N9W5 541 aa13.94□□□□□ -0.18
USP49-201ENST00000373006 SEPT1Q8WYJ6 367 aa13.94□□□□□ -0.18
USP49-201ENST00000373006 NDRG1Q92597 394 aaKnown RBP13.94□□□□□ -0.18
USP49-201ENST00000373006 BRD8Q9H0E9 1235 aa13.94□□□□□ -0.18
USP49-201ENST00000373006 FZD8Q9H461 694 aa13.94□□□□□ -0.18
USP49-201ENST00000373006 ARMC7Q9H6L4 198 aa13.94□□□□□ -0.18
USP49-201ENST00000373006 EFCAB1Q9HAE3 211 aa13.94□□□□□ -0.18
USP49-201ENST00000373006 CIDEBQ9UHD4 219 aa13.94□□□□□ -0.18
USP49-201ENST00000373006 SNX13Q9Y5W8 968 aa13.94□□□□□ -0.18
USP49-201ENST00000373006 ARHGEF37A1IGU5 675 aa13.94□□□□□ -0.18
USP49-201ENST00000373006 ZBTB42B2RXF5 422 aa13.94□□□□□ -0.18
USP49-201ENST00000373006 DPYSL4O14531 572 aa13.94□□□□□ -0.18
USP49-201ENST00000373006 LSM1O15116 133 aaKnown RBP13.94□□□□□ -0.18
USP49-201ENST00000373006 PHGDHO43175 533 aaKnown RBP13.94□□□□□ -0.18
USP49-201ENST00000373006 BCAS2O75934 225 aaPredicted RBP13.94□□□□□ -0.18
USP49-201ENST00000373006 IL18RAPO95256 599 aa13.94□□□□□ -0.18
USP49-201ENST00000373006 ZFXP17010 805 aaPredicted RBP13.94□□□□□ -0.18
USP49-201ENST00000373006 NUMBP49757 651 aa13.94□□□□□ -0.18
USP49-201ENST00000373006 SFSWAPQ12872 951 aaKnown RBP13.94□□□□□ -0.18
USP49-201ENST00000373006 LPCAT2Q7L5N7 544 aa13.94□□□□□ -0.18
USP49-201ENST00000373006 ZNF554Q86TJ5 538 aa13.94□□□□□ -0.18
USP49-201ENST00000373006 TMEM110Q86TL2 294 aa13.94□□□□□ -0.18
USP49-201ENST00000373006 SPNS2Q8IVW8 549 aa13.94□□□□□ -0.18
USP49-201ENST00000373006 SNX31Q8N9S9 440 aa13.94□□□□□ -0.18
USP49-201ENST00000373006 ZNF280CQ8ND82 737 aa13.94□□□□□ -0.18
USP49-201ENST00000373006 SCYL1Q96KG9 808 aa13.94□□□□□ -0.18
USP49-201ENST00000373006 MRPL45Q9BRJ2 306 aaKnown RBP13.94□□□□□ -0.18
USP49-201ENST00000373006 ACE2Q9BYF1 805 aaPredicted RBP13.94□□□□□ -0.18
USP49-201ENST00000373006 CYP3A43Q9HB55 503 aa13.94□□□□□ -0.18
USP49-201ENST00000373006 OXSMQ9NWU1 459 aa13.94□□□□□ -0.18
USP49-201ENST00000373006 MGAMO43451 1857 aa13.94□□□□□ -0.18
USP49-201ENST00000373006 ACOT8O14734 319 aa13.93□□□□□ -0.18
USP49-201ENST00000373006 VAPBO95292 243 aa13.93□□□□□ -0.18
USP49-201ENST00000373006 TPH1P17752 444 aa13.93□□□□□ -0.18
USP49-201ENST00000373006 LIMK2P53671 638 aa13.93□□□□□ -0.18
USP49-201ENST00000373006 PTK2BQ14289 1009 aa13.93□□□□□ -0.18
USP49-201ENST00000373006 SLC10A6Q3KNW5 377 aa13.93□□□□□ -0.18
USP49-201ENST00000373006 CYP2R1Q6VVX0 501 aa13.93□□□□□ -0.18
USP49-201ENST00000373006 ZNF567Q8N184 647 aa13.93□□□□□ -0.18
USP49-201ENST00000373006 SREK1Q8WXA9 508 aaKnown RBP13.93□□□□□ -0.18
USP49-201ENST00000373006 SLC29A1Q99808 456 aa13.93□□□□□ -0.18
USP49-201ENST00000373006 CIB1Q99828 191 aa13.93□□□□□ -0.18
USP49-201ENST00000373006 TMEM79Q9BSE2 394 aa13.93□□□□□ -0.18
USP49-201ENST00000373006 TRPV6Q9H1D0 765 aa13.93□□□□□ -0.18
USP49-201ENST00000373006 HACL1Q9UJ83 578 aa13.93□□□□□ -0.18
USP49-201ENST00000373006 HDCP19113 662 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms