RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 TGDSO95455 350 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 CTNNA2P26232 953 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 ATICP31939 592 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 CPA2P48052 419 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 GALCP54803 685 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 PEX3P56589 373 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 SNRPFP62306 86 aaKnown RBP9.03□□□□□ -0.96
ATG4A-203ENST00000372232 ZNF200P98182 395 aaPredicted RBP9.03□□□□□ -0.96
ATG4A-203ENST00000372232 TSPY1Q01534 308 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 PPP3CAQ08209 521 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 CALCOCO2Q13137 446 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 GK3PQ14409 553 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 STAT4Q14765 748 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 BBS9Q3SYG4 887 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 XKR9Q5GH70 373 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 PLA2G2CQ5R387 149 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 TRMT1LQ7Z2T5 733 aaKnown RBP9.03□□□□□ -0.96
ATG4A-203ENST00000372232 GPR141Q7Z602 305 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 TMEM126BQ8IUX1 230 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 CCDC89Q8N998 374 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 XXYLT1Q8NBI6 393 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 GALNT6Q8NCL4 622 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 TP53INP1Q96A56 240 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 OXNAD1Q96HP4 312 aaPredicted RBP9.03□□□□□ -0.96
ATG4A-203ENST00000372232 LRGUKQ96M69 825 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 ACAP3Q96P50 834 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 CDK15Q96Q40 435 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 ALPK1Q96QP1 1244 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 WRNIP1Q96S55 665 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 DOK1Q99704 481 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 COQ7Q99807 217 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 TMEM120AQ9BXJ8 343 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 CLPBQ9H078 707 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 RIC8BQ9NVN3 520 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 GMIPQ9P107 970 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 TBK1Q9UHD2 729 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 ADAMTS5Q9UNA0 930 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 PCDHB4Q9Y5E5 795 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 FER1L6Q2WGJ9 1857 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 A0A1W2PP55 124 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 J3QRK9 145 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 MEN1O00255 615 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 FOXN3O00409 490 aaPredicted RBP9.03□□□□□ -0.96
ATG4A-203ENST00000372232 SNPHO15079 494 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 ZNF254O75437 659 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 NR4A1P22736 598 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 CCND2P30279 289 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 OAZ1P54368 228 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 CETN1Q12798 172 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 SLC1A5Q15758 541 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 C1orf220Q5T0J3 134 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 FAM102BQ5T8I3 360 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 PRAMEF18Q5VWM3 479 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 PLA2G4FQ68DD2 849 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 IDO2Q6ZQW0 420 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 GK5Q6ZS86 529 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 GALNT7Q86SF2 657 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 GLRX5Q86SX6 157 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 TTC7BQ86TV6 843 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 PRELID2Q8N945 189 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 Q8N9G6 341 aaPredicted RBP9.03□□□□□ -0.96
ATG4A-203ENST00000372232 CATSPER1Q8NEC5 780 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 ZSWIM2Q8NEG5 633 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 RDM1Q8NG50 284 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 GSDMBQ8TAX9 411 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 SLC26A7Q8TE54 656 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 HSPH1Q92598 858 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 SGCDQ92629 289 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 FBXL8Q96CD0 374 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 SENP7Q9BQF6 1050 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 DCUN1D5Q9BTE7 237 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 NIFKQ9BYG3 293 aaKnown RBP9.03□□□□□ -0.96
ATG4A-203ENST00000372232 DCLK3Q9C098 648 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 ZIM2Q9NZV7 527 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 SENP1Q9P0U3 644 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 WHRNQ9P202 907 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 TAGLN3Q9UI15 199 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 DAPK2Q9UIK4 370 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 PCDHA10Q9Y5I2 948 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 CORINQ9Y5Q5 1042 aa9.03□□□□□ -0.96
ATG4A-203ENST00000372232 LTBP3Q9NS15 1303 aa9.02□□□□□ -0.96
ATG4A-203ENST00000372232 LOXHD1Q8IVV2 1947 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 TP73O15350 636 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 CYP26A1O43174 497 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 MSI1O43347 362 aaKnown RBP9.02□□□□□ -0.97
ATG4A-203ENST00000372232 PAGE1O75459 146 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 RAG1P15918 1043 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 PRKACAP17612 351 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 CFL1P23528 166 aaKnown RBP9.02□□□□□ -0.97
ATG4A-203ENST00000372232 ADSSP30520 456 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 GCLMP48507 274 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 EPHB1P54762 984 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 HMGCS2P54868 508 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 TPTEP56180 551 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 GJA9P57773 515 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 CTBSQ01459 385 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 PRKCEQ02156 737 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 ITGADQ13349 1161 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 ARHGAP44Q17R89 818 aa9.02□□□□□ -0.97
ATG4A-203ENST00000372232 ZBED5Q49AG3 693 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms