RNA–Protein interactions for RNA: ENST00000367505.6

SHPRH-203, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SHPRH, Length 7,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-203ENST00000367505 PANX3Q96QZ0 392 aa8.4□□□□□ -1.07
SHPRH-203ENST00000367505 SPATC1LQ9H0A9 340 aa8.4□□□□□ -1.07
SHPRH-203ENST00000367505 ANKRD26Q9UPS8 1709 aa8.4□□□□□ -1.07
SHPRH-203ENST00000367505 NFASCO94856 1347 aa8.4□□□□□ -1.07
SHPRH-203ENST00000367505 CCL15-CCL14A0A0B4J2E2 113 aa8.4□□□□□ -1.07
SHPRH-203ENST00000367505 SLC12A8A0AV02 714 aa8.4□□□□□ -1.07
SHPRH-203ENST00000367505 H3BNX3 289 aa8.4□□□□□ -1.07
SHPRH-203ENST00000367505 TGFB1I1O43294 461 aa8.4□□□□□ -1.07
SHPRH-203ENST00000367505 LTFP02788 710 aa8.4□□□□□ -1.07
SHPRH-203ENST00000367505 ITGA2BP08514 1039 aa8.4□□□□□ -1.07
SHPRH-203ENST00000367505 IRF1P10914 325 aa8.4□□□□□ -1.07
SHPRH-203ENST00000367505 CDH8P55286 799 aa8.4□□□□□ -1.07
SHPRH-203ENST00000367505 SOX10P56693 466 aa8.4□□□□□ -1.07
SHPRH-203ENST00000367505 CDC16Q13042 620 aa8.4□□□□□ -1.07
SHPRH-203ENST00000367505 CCL15Q16663 113 aa8.4□□□□□ -1.07
SHPRH-203ENST00000367505 ZNF618Q5T7W0 954 aa8.4□□□□□ -1.07
SHPRH-203ENST00000367505 TDRPQ86YL5 185 aa8.4□□□□□ -1.07
SHPRH-203ENST00000367505 PQLC1Q8N2U9 271 aa8.4□□□□□ -1.07
SHPRH-203ENST00000367505 FAM81AQ8TBF8 368 aa8.4□□□□□ -1.07
SHPRH-203ENST00000367505 TLCD1Q96CP7 247 aa8.4□□□□□ -1.07
SHPRH-203ENST00000367505 MFSD14AQ96MC6 490 aa8.4□□□□□ -1.07
SHPRH-203ENST00000367505 CLK4Q9HAZ1 481 aaKnown RBP8.4□□□□□ -1.07
SHPRH-203ENST00000367505 SQORQ9Y6N5 450 aa8.4□□□□□ -1.07
SHPRH-203ENST00000367505 NID2Q14112 1375 aa8.4□□□□□ -1.07
SHPRH-203ENST00000367505 RNF225M0QZC1 329 aaPredicted RBP8.39□□□□□ -1.07
SHPRH-203ENST00000367505 CPSF4O95639 269 aaKnown RBP8.39□□□□□ -1.07
SHPRH-203ENST00000367505 PAX3P23760 479 aa8.39□□□□□ -1.07
SHPRH-203ENST00000367505 S100A3P33764 101 aa8.39□□□□□ -1.07
SHPRH-203ENST00000367505 HALP42357 657 aa8.39□□□□□ -1.07
SHPRH-203ENST00000367505 IL12RB1P42701 662 aa8.39□□□□□ -1.07
SHPRH-203ENST00000367505 TUBP50607 506 aa8.39□□□□□ -1.07
SHPRH-203ENST00000367505 TBX4P57082 545 aa8.39□□□□□ -1.07
SHPRH-203ENST00000367505 EFEMP1Q12805 493 aa8.39□□□□□ -1.07
SHPRH-203ENST00000367505 NRF1Q16656 503 aa8.39□□□□□ -1.07
SHPRH-203ENST00000367505 TRIM71Q2Q1W2 868 aaKnown RBP8.39□□□□□ -1.07
SHPRH-203ENST00000367505 ZNF280DQ6N043 979 aa8.39□□□□□ -1.07
SHPRH-203ENST00000367505 CASP12Q6UXS9 341 aa8.39□□□□□ -1.07
SHPRH-203ENST00000367505 VSIG10LQ86VR7 867 aa8.39□□□□□ -1.07
SHPRH-203ENST00000367505 HERC6Q8IVU3 1022 aa8.39□□□□□ -1.07
SHPRH-203ENST00000367505 C12orf50Q8NA57 414 aaPredicted RBP8.39□□□□□ -1.07
SHPRH-203ENST00000367505 ZSCAN18Q8TBC5 510 aaPredicted RBP8.39□□□□□ -1.07
SHPRH-203ENST00000367505 FAM45AQ8TCE6 357 aa8.39□□□□□ -1.07
SHPRH-203ENST00000367505 UTP15Q8TED0 518 aaKnown RBP8.39□□□□□ -1.07
SHPRH-203ENST00000367505 LENG1Q96BZ8 264 aaPredicted RBP8.39□□□□□ -1.07
SHPRH-203ENST00000367505 ZFP42Q96MM3 310 aa8.39□□□□□ -1.07
SHPRH-203ENST00000367505 TTYH3Q9C0H2 523 aa8.39□□□□□ -1.07
SHPRH-203ENST00000367505 REEP1Q9H902 201 aa8.39□□□□□ -1.07
SHPRH-203ENST00000367505 DDX3YO15523 660 aaKnown RBP8.39□□□□□ -1.07
SHPRH-203ENST00000367505 NPM3O75607 178 aaKnown RBP8.39□□□□□ -1.07
SHPRH-203ENST00000367505 APOBEC3HQ6NTF7 200 aaKnown RBP8.39□□□□□ -1.07
SHPRH-203ENST00000367505 UNC5AQ6ZN44 842 aa8.39□□□□□ -1.07
SHPRH-203ENST00000367505 B3GALNT2Q8NCR0 500 aa8.39□□□□□ -1.07
SHPRH-203ENST00000367505 SPPL2AQ8TCT8 520 aa8.39□□□□□ -1.07
SHPRH-203ENST00000367505 KAT2BQ92831 832 aa8.39□□□□□ -1.07
SHPRH-203ENST00000367505 NKD2Q969F2 451 aaPredicted RBP8.39□□□□□ -1.07
SHPRH-203ENST00000367505 C7orf26Q96N11 449 aa8.39□□□□□ -1.07
SHPRH-203ENST00000367505 TCF12Q99081 682 aa8.39□□□□□ -1.07
SHPRH-203ENST00000367505 C6orf62Q9GZU0 229 aaPredicted RBP8.39□□□□□ -1.07
SHPRH-203ENST00000367505 CLIC5Q9NZA1 410 aa8.39□□□□□ -1.07
SHPRH-203ENST00000367505 ATXN10Q9UBB4 475 aa8.39□□□□□ -1.07
SHPRH-203ENST00000367505 TNFSF13BQ9Y275 285 aa8.39□□□□□ -1.07
SHPRH-203ENST00000367505 PRG3Q9Y2Y8 225 aaPredicted RBP8.39□□□□□ -1.07
SHPRH-203ENST00000367505 PCDHB7Q9Y5E2 793 aa8.39□□□□□ -1.07
SHPRH-203ENST00000367505 UMODL1Q5DID0 1318 aa8.39□□□□□ -1.07
SHPRH-203ENST00000367505 TM7SF2O76062 418 aa8.39□□□□□ -1.07
SHPRH-203ENST00000367505 TCF3P15923 654 aa8.39□□□□□ -1.07
SHPRH-203ENST00000367505 FOLH1Q04609 750 aa8.39□□□□□ -1.07
SHPRH-203ENST00000367505 TMEM132BQ14DG7 1078 aa8.39□□□□□ -1.07
SHPRH-203ENST00000367505 SLC30A10Q6XR72 485 aa8.39□□□□□ -1.07
SHPRH-203ENST00000367505 YAF2Q8IY57 180 aa8.39□□□□□ -1.07
SHPRH-203ENST00000367505 SLC44A1Q8WWI5 657 aa8.39□□□□□ -1.07
SHPRH-203ENST00000367505 RNFT2Q96EX2 444 aa8.39□□□□□ -1.07
SHPRH-203ENST00000367505 GORASP1Q9BQQ3 440 aa8.39□□□□□ -1.07
SHPRH-203ENST00000367505 HGH1Q9BTY7 390 aa8.39□□□□□ -1.07
SHPRH-203ENST00000367505 UBIAD1Q9Y5Z9 338 aa8.39□□□□□ -1.07
SHPRH-203ENST00000367505 KCNH1O95259 989 aa8.39□□□□□ -1.07
SHPRH-203ENST00000367505 BPGMP07738 259 aa8.39□□□□□ -1.07
SHPRH-203ENST00000367505 SPATA31C1P0DKV0 1188 aa8.39□□□□□ -1.07
SHPRH-203ENST00000367505 YY1P25490 414 aa8.39□□□□□ -1.07
SHPRH-203ENST00000367505 HOXA10P31260 410 aaPredicted RBP8.39□□□□□ -1.07
SHPRH-203ENST00000367505 GRIA3P42263 894 aa8.39□□□□□ -1.07
SHPRH-203ENST00000367505 GRIA4P48058 902 aa8.39□□□□□ -1.07
SHPRH-203ENST00000367505 IL2P60568 153 aa8.39□□□□□ -1.07
SHPRH-203ENST00000367505 PPIL2Q13356 520 aa8.39□□□□□ -1.07
SHPRH-203ENST00000367505 BFSP2Q13515 415 aa8.39□□□□□ -1.07
SHPRH-203ENST00000367505 GPSM1Q86YR5 675 aa8.39□□□□□ -1.07
SHPRH-203ENST00000367505 SLC2A14Q8TDB8 520 aa8.39□□□□□ -1.07
SHPRH-203ENST00000367505 REPS1Q96D71 796 aa8.39□□□□□ -1.07
SHPRH-203ENST00000367505 CELF6Q96J87 481 aaKnown RBP8.39□□□□□ -1.07
SHPRH-203ENST00000367505 L3MBTL3Q96JM7 780 aaPredicted RBP8.39□□□□□ -1.07
SHPRH-203ENST00000367505 ZFYVE28Q9HCC9 887 aa8.39□□□□□ -1.07
SHPRH-203ENST00000367505 MIEF1Q9NQG6 463 aa8.39□□□□□ -1.07
SHPRH-203ENST00000367505 SNTG2Q9NY99 539 aa8.39□□□□□ -1.07
SHPRH-203ENST00000367505 KANSL3Q9P2N6 904 aa8.39□□□□□ -1.07
SHPRH-203ENST00000367505 INVSQ9Y283 1065 aa8.39□□□□□ -1.07
SHPRH-203ENST00000367505 ITM2BQ9Y287 266 aa8.39□□□□□ -1.07
SHPRH-203ENST00000367505 SF3B1O75533 1304 aaKnown RBP eCLIP8.39□□□□□ -1.076e-6■■■■■ 103.4
SHPRH-203ENST00000367505 PRR23AA6NEV1 266 aa8.39□□□□□ -1.07
SHPRH-203ENST00000367505 PTGES3LE9PB15 166 aa8.39□□□□□ -1.07
SHPRH-203ENST00000367505 PSMB4P28070 264 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms