RNA–Protein interactions for RNA: ENST00000367364.5

PTPRC-202, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-202ENST00000367364 SFXN1Q9H9B4 322 aa4.21□□□□□ -1.74
PTPRC-202ENST00000367364 PCDH12Q9NPG4 1184 aa4.21□□□□□ -1.74
PTPRC-202ENST00000367364 AGO1Q9UL18 857 aaKnown RBP4.21□□□□□ -1.74
PTPRC-202ENST00000367364 LRPPRCP42704 1394 aaKnown RBP4.21□□□□□ -1.74
PTPRC-202ENST00000367364 CECR2Q9BXF3 1484 aa4.21□□□□□ -1.74
PTPRC-202ENST00000367364 TIAM1Q13009 1591 aa4.21□□□□□ -1.74
PTPRC-202ENST00000367364 PRXQ9BXM0 1461 aa4.2□□□□□ -1.74
PTPRC-202ENST00000367364 IBTKQ9P2D0 1353 aaPredicted RBP4.2□□□□□ -1.74
PTPRC-202ENST00000367364 SAC3D1A6NKF1 404 aa4.2□□□□□ -1.74
PTPRC-202ENST00000367364 DHHO43323 396 aa4.2□□□□□ -1.74
PTPRC-202ENST00000367364 KRT5P13647 590 aa4.2□□□□□ -1.74
PTPRC-202ENST00000367364 NAGAP17050 411 aa4.2□□□□□ -1.74
PTPRC-202ENST00000367364 IGFBP2P18065 325 aa4.2□□□□□ -1.74
PTPRC-202ENST00000367364 RNF220Q5VTB9 566 aa4.2□□□□□ -1.74
PTPRC-202ENST00000367364 BSPRYQ5W0U4 402 aa4.2□□□□□ -1.74
PTPRC-202ENST00000367364 MRNIPQ6NTE8 343 aa4.2□□□□□ -1.74
PTPRC-202ENST00000367364 MSANTD2Q6P1R3 559 aa4.2□□□□□ -1.74
PTPRC-202ENST00000367364 KRT27Q7Z3Y8 459 aa4.2□□□□□ -1.74
PTPRC-202ENST00000367364 CCDC28AQ8IWP9 274 aa4.2□□□□□ -1.74
PTPRC-202ENST00000367364 SCMH1Q96GD3 660 aa4.2□□□□□ -1.74
PTPRC-202ENST00000367364 ZNF830Q96NB3 372 aaPredicted RBP4.2□□□□□ -1.74
PTPRC-202ENST00000367364 DUX3Q96PT4 197 aa4.2□□□□□ -1.74
PTPRC-202ENST00000367364 CHMP4BQ9H444 224 aaKnown RBP4.2□□□□□ -1.74
PTPRC-202ENST00000367364 PRKRIP1Q9H875 184 aaPredicted RBP4.2□□□□□ -1.74
PTPRC-202ENST00000367364 TYW1Q9NV66 732 aaKnown RBP4.2□□□□□ -1.74
PTPRC-202ENST00000367364 FBXO28Q9NVF7 368 aa4.2□□□□□ -1.74
PTPRC-202ENST00000367364 MALT1Q9UDY8 824 aa4.2□□□□□ -1.74
PTPRC-202ENST00000367364 HECW1Q76N89 1606 aa4.2□□□□□ -1.74
PTPRC-202ENST00000367364 BIVM-ERCC5R4GMW8 1640 aa4.2□□□□□ -1.74
PTPRC-202ENST00000367364 SPATA31E1Q6ZUB1 1445 aa4.2□□□□□ -1.74
PTPRC-202ENST00000367364 RAPGEF2Q9Y4G8 1499 aa4.19□□□□□ -1.74
PTPRC-202ENST00000367364 PRDM2Q13029 1718 aa4.19□□□□□ -1.74
PTPRC-202ENST00000367364 IGHV4-28A0A0C4DH34 117 aa4.19□□□□□ -1.74
PTPRC-202ENST00000367364 AFPP02771 609 aaKnown RBP4.19□□□□□ -1.74
PTPRC-202ENST00000367364 CHRNA5P30532 468 aa4.19□□□□□ -1.74
PTPRC-202ENST00000367364 AVPR1AP37288 418 aa4.19□□□□□ -1.74
PTPRC-202ENST00000367364 CACNB3P54284 484 aa4.19□□□□□ -1.74
PTPRC-202ENST00000367364 KRTAP13-3Q3SY46 172 aa4.19□□□□□ -1.74
PTPRC-202ENST00000367364 CCDC184Q52MB2 194 aa4.19□□□□□ -1.74
PTPRC-202ENST00000367364 ARL13AQ5H913 290 aaPredicted RBP4.19□□□□□ -1.74
PTPRC-202ENST00000367364 TAF3Q5VWG9 929 aa4.19□□□□□ -1.74
PTPRC-202ENST00000367364 ZNF772Q68DY9 489 aaPredicted RBP4.19□□□□□ -1.74
PTPRC-202ENST00000367364 WDR93Q6P2C0 686 aa4.19□□□□□ -1.74
PTPRC-202ENST00000367364 USP17L6PQ6QN14 398 aa4.19□□□□□ -1.74
PTPRC-202ENST00000367364 KIAA0408Q6ZU52 694 aa4.19□□□□□ -1.74
PTPRC-202ENST00000367364 SORCS1Q8WY21 1168 aa4.19□□□□□ -1.74
PTPRC-202ENST00000367364 SIN3AQ96ST3 1273 aa4.19□□□□□ -1.74
PTPRC-202ENST00000367364 NUDT22Q9BRQ3 303 aa4.19□□□□□ -1.74
PTPRC-202ENST00000367364 FRMD8Q9BZ67 464 aaPredicted RBP4.19□□□□□ -1.74
PTPRC-202ENST00000367364 BCCIPQ9P287 314 aaKnown RBP eCLIP4.19□□□□□ -1.74
PTPRC-202ENST00000367364 UBE2J1Q9Y385 318 aaPredicted RBP4.19□□□□□ -1.74
PTPRC-202ENST00000367364 COL4A3BPQ9Y5P4 624 aa4.19□□□□□ -1.74
PTPRC-202ENST00000367364 SCRIBQ14160 1630 aa4.19□□□□□ -1.74
PTPRC-202ENST00000367364 SHROOM2Q13796 1616 aa4.18□□□□□ -1.74
PTPRC-202ENST00000367364 DHX29Q7Z478 1369 aaKnown RBP4.18□□□□□ -1.74
PTPRC-202ENST00000367364 IGLV5-37A0A075B6J1 123 aa4.18□□□□□ -1.74
PTPRC-202ENST00000367364 NPC1O15118 1278 aa4.18□□□□□ -1.74
PTPRC-202ENST00000367364 EDIL3O43854 480 aa4.18□□□□□ -1.74
PTPRC-202ENST00000367364 LETM1O95202 739 aaPredicted RBP4.18□□□□□ -1.74
PTPRC-202ENST00000367364 RAP1GAP2Q684P5 730 aa4.18□□□□□ -1.74
PTPRC-202ENST00000367364 BICD1Q96G01 975 aa4.18□□□□□ -1.74
PTPRC-202ENST00000367364 TRMT61BQ9BVS5 477 aaKnown RBP4.18□□□□□ -1.74
PTPRC-202ENST00000367364 GCC2Q8IWJ2 1684 aa4.18□□□□□ -1.74
PTPRC-202ENST00000367364 KIAA1107Q9UPP5 1409 aa4.18□□□□□ -1.74
PTPRC-202ENST00000367364 CCDC7Q96M83 1385 aa4.17□□□□□ -1.74
PTPRC-202ENST00000367364 E2F8A0AVK6 867 aa4.17□□□□□ -1.74
PTPRC-202ENST00000367364 GOLGA6L3A6NEY3 463 aa4.17□□□□□ -1.74
PTPRC-202ENST00000367364 DYNC1I1O14576 645 aa4.17□□□□□ -1.74
PTPRC-202ENST00000367364 RFPL1O75677 317 aa4.17□□□□□ -1.74
PTPRC-202ENST00000367364 SERPINI2O75830 405 aa4.17□□□□□ -1.74
PTPRC-202ENST00000367364 DGKAP23743 735 aa4.17□□□□□ -1.74
PTPRC-202ENST00000367364 RBM6P78332 1123 aaKnown RBP4.17□□□□□ -1.74
PTPRC-202ENST00000367364 MYBPHQ13203 477 aa4.17□□□□□ -1.74
PTPRC-202ENST00000367364 PKP1Q13835 747 aa4.17□□□□□ -1.74
PTPRC-202ENST00000367364 IGFN1Q86VF2 1251 aa4.17□□□□□ -1.74
PTPRC-202ENST00000367364 DPP10Q8N608 796 aa4.17□□□□□ -1.74
PTPRC-202ENST00000367364 MIGA1Q8NAN2 632 aa4.17□□□□□ -1.74
PTPRC-202ENST00000367364 ZNF114Q8NC26 417 aa4.17□□□□□ -1.74
PTPRC-202ENST00000367364 FBXO17Q96EF6 278 aa4.17□□□□□ -1.74
PTPRC-202ENST00000367364 PRDM11Q9NQV5 511 aa4.17□□□□□ -1.74
PTPRC-202ENST00000367364 PTPN23Q9H3S7 1636 aa4.17□□□□□ -1.74
PTPRC-202ENST00000367364 BCORL1Q5H9F3 1711 aa4.16□□□□□ -1.74
PTPRC-202ENST00000367364 UACAQ9BZF9 1416 aa4.16□□□□□ -1.74
PTPRC-202ENST00000367364 NCOA3Q9Y6Q9 1424 aa4.16□□□□□ -1.74
PTPRC-202ENST00000367364 MAGEA13PA6NCF6 341 aa4.16□□□□□ -1.74
PTPRC-202ENST00000367364 NPIPB11E5RHQ5 1161 aa4.16□□□□□ -1.74
PTPRC-202ENST00000367364 ZNF500O60304 480 aaPredicted RBP4.16□□□□□ -1.74
PTPRC-202ENST00000367364 ALDH1L1O75891 902 aa4.16□□□□□ -1.74
PTPRC-202ENST00000367364 ZBTB16Q05516 673 aa4.16□□□□□ -1.74
PTPRC-202ENST00000367364 EFHC1Q5JVL4 640 aa4.16□□□□□ -1.74
PTPRC-202ENST00000367364 ERAP2Q6P179 960 aa4.16□□□□□ -1.74
PTPRC-202ENST00000367364 HORMAD2Q8N7B1 307 aa4.16□□□□□ -1.74
PTPRC-202ENST00000367364 SLC22A17Q8WUG5 538 aa4.16□□□□□ -1.74
PTPRC-202ENST00000367364 CD101Q93033 1021 aa4.16□□□□□ -1.74
PTPRC-202ENST00000367364 SECISBP2LQ93073 1101 aaKnown RBP4.16□□□□□ -1.74
PTPRC-202ENST00000367364 GRAMD1AQ96CP6 724 aa4.16□□□□□ -1.74
PTPRC-202ENST00000367364 LRRC46Q96FV0 321 aa4.16□□□□□ -1.74
PTPRC-202ENST00000367364 STRBPQ96SI9 672 aaKnown RBP4.16□□□□□ -1.74
PTPRC-202ENST00000367364 PAAF1Q9BRP4 392 aa4.16□□□□□ -1.74
PTPRC-202ENST00000367364 CCDC94Q9BW85 323 aaPredicted RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms