RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 GABRB2P47870 512 aa12.93□□□□□ -0.34
VAMP1-201ENST00000361716 ADAM17P78536 824 aa12.93□□□□□ -0.34
VAMP1-201ENST00000361716 SCUBE3Q8IX30 993 aa12.93□□□□□ -0.34
VAMP1-201ENST00000361716 KIAA0319LQ8IZA0 1049 aa12.93□□□□□ -0.34
VAMP1-201ENST00000361716 CBR4Q8N4T8 237 aa12.93□□□□□ -0.34
VAMP1-201ENST00000361716 SLC39A3Q9BRY0 314 aa12.93□□□□□ -0.34
VAMP1-201ENST00000361716 CCDC90BQ9GZT6 254 aa12.93□□□□□ -0.34
VAMP1-201ENST00000361716 SNX25Q9H3E2 840 aa12.93□□□□□ -0.34
VAMP1-201ENST00000361716 GIN1Q9NXP7 522 aa12.93□□□□□ -0.34
VAMP1-201ENST00000361716 GTSE1Q9NYZ3 720 aa12.93□□□□□ -0.34
VAMP1-201ENST00000361716 CCDC167Q9P0B6 97 aa12.93□□□□□ -0.34
VAMP1-201ENST00000361716 FETUBQ9UGM5 382 aa12.93□□□□□ -0.34
VAMP1-201ENST00000361716 UBIAD1Q9Y5Z9 338 aa12.93□□□□□ -0.34
VAMP1-201ENST00000361716 PSAT1Q9Y617 370 aa12.93□□□□□ -0.34
VAMP1-201ENST00000361716 NRXN2Q9P2S2 1712 aa12.93□□□□□ -0.34
VAMP1-201ENST00000361716 KCNU1A8MYU2 1149 aa12.93□□□□□ -0.34
VAMP1-201ENST00000361716 ITGB3P05106 788 aa12.93□□□□□ -0.34
VAMP1-201ENST00000361716 CXCL8P10145 99 aa12.93□□□□□ -0.34
VAMP1-201ENST00000361716 ZNF12P17014 697 aa12.93□□□□□ -0.34
VAMP1-201ENST00000361716 TKTP29401 623 aaKnown RBP12.93□□□□□ -0.34
VAMP1-201ENST00000361716 EPHX2P34913 555 aa12.93□□□□□ -0.34
VAMP1-201ENST00000361716 AVPR1AP37288 418 aa12.93□□□□□ -0.34
VAMP1-201ENST00000361716 GRIA3P42263 894 aa12.93□□□□□ -0.34
VAMP1-201ENST00000361716 PCLAFQ15004 111 aa12.93□□□□□ -0.34
VAMP1-201ENST00000361716 LSM12Q3MHD2 195 aaKnown RBP12.93□□□□□ -0.34
VAMP1-201ENST00000361716 ZIK1Q3SY52 487 aaPredicted RBP12.93□□□□□ -0.34
VAMP1-201ENST00000361716 SLFN12LQ6IEE8 588 aa12.93□□□□□ -0.34
VAMP1-201ENST00000361716 BBS12Q6ZW61 710 aa12.93□□□□□ -0.34
VAMP1-201ENST00000361716 TAS1R3Q7RTX0 852 aa12.93□□□□□ -0.34
VAMP1-201ENST00000361716 PHF13Q86YI8 300 aaPredicted RBP12.93□□□□□ -0.34
VAMP1-201ENST00000361716 C12orf56Q8IXR9 622 aa12.93□□□□□ -0.34
VAMP1-201ENST00000361716 ZC3H15Q8WU90 426 aaKnown RBP12.93□□□□□ -0.34
VAMP1-201ENST00000361716 FBXL20Q96IG2 436 aa12.93□□□□□ -0.34
VAMP1-201ENST00000361716 SNX27Q96L92 541 aa12.93□□□□□ -0.34
VAMP1-201ENST00000361716 EFHD1Q9BUP0 239 aa12.93□□□□□ -0.34
VAMP1-201ENST00000361716 OSBPL11Q9BXB4 747 aa12.93□□□□□ -0.34
VAMP1-201ENST00000361716 DGCR6LQ9BY27 220 aa12.93□□□□□ -0.34
VAMP1-201ENST00000361716 MAST2Q6P0Q8 1798 aa12.93□□□□□ -0.34
VAMP1-201ENST00000361716 KRBA1A5PL33 1030 aa12.93□□□□□ -0.34
VAMP1-201ENST00000361716 SPDYE2BA6NHP3 402 aa12.93□□□□□ -0.34
VAMP1-201ENST00000361716 E7ESA3 106 aa12.93□□□□□ -0.34
VAMP1-201ENST00000361716 CLOCKO15516 846 aa12.93□□□□□ -0.34
VAMP1-201ENST00000361716 MAN1A2O60476 641 aa12.93□□□□□ -0.34
VAMP1-201ENST00000361716 SPDYE6P0CI01 402 aa12.93□□□□□ -0.34
VAMP1-201ENST00000361716 CNTN2Q02246 1040 aa12.93□□□□□ -0.34
VAMP1-201ENST00000361716 SF3B4Q15427 424 aaKnown RBP eCLIP12.93□□□□□ -0.34
VAMP1-201ENST00000361716 GLRA4Q5JXX5 417 aa12.93□□□□□ -0.34
VAMP1-201ENST00000361716 LZTR1Q8N653 840 aa12.93□□□□□ -0.34
VAMP1-201ENST00000361716 LPGAT1Q92604 370 aa12.93□□□□□ -0.34
VAMP1-201ENST00000361716 NSMCE3Q96MG7 304 aa12.93□□□□□ -0.34
VAMP1-201ENST00000361716 SLX1AQ9BQ83 275 aa12.93□□□□□ -0.34
VAMP1-201ENST00000361716 HIPK3Q9H422 1215 aa12.93□□□□□ -0.34
VAMP1-201ENST00000361716 POPDC2Q9HBU9 364 aa12.93□□□□□ -0.34
VAMP1-201ENST00000361716 OLAHQ9NV23 265 aa12.93□□□□□ -0.34
VAMP1-201ENST00000361716 HMGXB4Q9UGU5 601 aa12.93□□□□□ -0.34
VAMP1-201ENST00000361716 MYH9P35579 1960 aaKnown RBP12.92□□□□□ -0.34
VAMP1-201ENST00000361716 KLRG2A4D1S0 409 aaPredicted RBP12.92□□□□□ -0.34
VAMP1-201ENST00000361716 H3BMQ9 156 aa12.92□□□□□ -0.34
VAMP1-201ENST00000361716 TUFMP49411 452 aaKnown RBP12.92□□□□□ -0.34
VAMP1-201ENST00000361716 ATXN1P54253 815 aaKnown RBP12.92□□□□□ -0.34
VAMP1-201ENST00000361716 CTBSQ01459 385 aa12.92□□□□□ -0.34
VAMP1-201ENST00000361716 XKR3Q5GH77 459 aa12.92□□□□□ -0.34
VAMP1-201ENST00000361716 KCTD8Q6ZWB6 473 aa12.92□□□□□ -0.34
VAMP1-201ENST00000361716 SPATA6LQ8N4H0 392 aa12.92□□□□□ -0.34
VAMP1-201ENST00000361716 NSUN6Q8TEA1 469 aaKnown RBP12.92□□□□□ -0.34
VAMP1-201ENST00000361716 FAM151AQ8WW52 585 aa12.92□□□□□ -0.34
VAMP1-201ENST00000361716 CLEC4DQ8WXI8 215 aa12.92□□□□□ -0.34
VAMP1-201ENST00000361716 COG8Q96MW5 612 aa12.92□□□□□ -0.34
VAMP1-201ENST00000361716 BIRC8Q96P09 236 aa12.92□□□□□ -0.34
VAMP1-201ENST00000361716 RANBP9Q96S59 729 aa12.92□□□□□ -0.34
VAMP1-201ENST00000361716 HAPLN2Q9GZV7 340 aa12.92□□□□□ -0.34
VAMP1-201ENST00000361716 TPK1Q9H3S4 243 aa12.92□□□□□ -0.34
VAMP1-201ENST00000361716 ASNSD1Q9NWL6 643 aa12.92□□□□□ -0.34
VAMP1-201ENST00000361716 GMPR2Q9P2T1 348 aaKnown RBP12.92□□□□□ -0.34
VAMP1-201ENST00000361716 EGFL7Q9UHF1 273 aa12.92□□□□□ -0.34
VAMP1-201ENST00000361716 SLC8A2Q9UPR5 921 aa12.92□□□□□ -0.34
VAMP1-201ENST00000361716 PDE4DIPQ5VU43 2346 aa12.92□□□□□ -0.34
VAMP1-201ENST00000361716 LRRC37AA6NMS7 1700 aa12.92□□□□□ -0.34
VAMP1-201ENST00000361716 SLC15A5A6NIM6 579 aa12.92□□□□□ -0.34
VAMP1-201ENST00000361716 B4GALT5O43286 388 aa12.92□□□□□ -0.34
VAMP1-201ENST00000361716 ARSAP15289 507 aa12.92□□□□□ -0.34
VAMP1-201ENST00000361716 OCA2Q04671 838 aa12.92□□□□□ -0.34
VAMP1-201ENST00000361716 OLIG2Q13516 323 aa12.92□□□□□ -0.34
VAMP1-201ENST00000361716 DGKDQ16760 1214 aa12.92□□□□□ -0.34
VAMP1-201ENST00000361716 ZBED5Q49AG3 693 aa12.92□□□□□ -0.34
VAMP1-201ENST00000361716 SEL1L3Q68CR1 1132 aa12.92□□□□□ -0.34
VAMP1-201ENST00000361716 FAM110BQ8TC76 370 aa12.92□□□□□ -0.34
VAMP1-201ENST00000361716 SORT1Q99523 831 aa12.92□□□□□ -0.34
VAMP1-201ENST00000361716 BEGAINQ9BUH8 593 aa12.92□□□□□ -0.34
VAMP1-201ENST00000361716 PAK5Q9P286 719 aa12.92□□□□□ -0.34
VAMP1-201ENST00000361716 COPG2Q9UBF2 871 aa12.92□□□□□ -0.34
VAMP1-201ENST00000361716 APOC4-APOC2K7ER74 178 aa12.91□□□□□ -0.34
VAMP1-201ENST00000361716 APOC2P02655 101 aa12.91□□□□□ -0.34
VAMP1-201ENST00000361716 NCAM1P13591 858 aa12.91□□□□□ -0.34
VAMP1-201ENST00000361716 LCP1P13796 627 aa12.91□□□□□ -0.34
VAMP1-201ENST00000361716 IDO1P14902 403 aa12.91□□□□□ -0.34
VAMP1-201ENST00000361716 NAGLUP54802 743 aa12.91□□□□□ -0.34
VAMP1-201ENST00000361716 YWHAEP62258 255 aaKnown RBP12.91□□□□□ -0.34
VAMP1-201ENST00000361716 RAB39AQ14964 217 aa12.91□□□□□ -0.34
VAMP1-201ENST00000361716 KCNJ8Q15842 424 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms