RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 DGKDQ16760 1214 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 ALG10Q5BKT4 473 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 ALG10BQ5I7T1 473 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 ACSM2BQ68CK6 577 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 CDYL2Q8N8U2 506 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 GMLQ99445 158 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 POP1Q99575 1024 aaKnown RBP6.1□□□□□ -1.43
RFC1-201ENST00000349703 ISG20L2Q9H9L3 353 aaKnown RBP6.1□□□□□ -1.43
RFC1-201ENST00000349703 MLXIPQ9HAP2 919 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 RBM12Q9NTZ6 932 aaKnown RBP6.1□□□□□ -1.43
RFC1-201ENST00000349703 TRIM10Q9UDY6 481 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 DERAQ9Y315 318 aa6.1□□□□□ -1.43
RFC1-201ENST00000349703 PIK3C2BO00750 1634 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 RNF223E7ERA6 249 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 VILLO15195 856 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 NME3Q13232 169 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 CERKLQ49MI3 558 aaPredicted RBP6.09□□□□□ -1.43
RFC1-201ENST00000349703 DHRS13Q6UX07 377 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 LDHAL6AQ6ZMR3 332 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 PCGF5Q86SE9 256 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 SPPL2CQ8IUH8 684 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 ELMOD1Q8N336 334 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 SLC35G2Q8TBE7 412 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 SLC9A6Q92581 669 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 GFM2Q969S9 779 aaKnown RBP6.09□□□□□ -1.43
RFC1-201ENST00000349703 PPM1MQ96MI6 270 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 ASPSCR1Q9BZE9 553 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 SLC39A2Q9NP94 309 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 TRMT112Q9UI30 125 aaKnown RBP6.09□□□□□ -1.43
RFC1-201ENST00000349703 PTRH2Q9Y3E5 179 aaKnown RBP6.09□□□□□ -1.43
RFC1-201ENST00000349703 USP15Q9Y4E8 981 aaPredicted RBP6.09□□□□□ -1.43
RFC1-201ENST00000349703 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.09□□□□□ -1.43
RFC1-201ENST00000349703 ABCC6O95255 1503 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 A0A0U1RQK1 487 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 ZNF320A2RRD8 509 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 GOLGA8IPA6NC78 632 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 E2F3O00716 465 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 SSX5O60225 188 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 DDNO94850 711 aaPredicted RBP6.09□□□□□ -1.43
RFC1-201ENST00000349703 PBX1P40424 430 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 MTHFRP42898 656 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 TUSC3Q13454 348 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 IRGCQ6NXR0 463 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 LILRA6Q6PI73 481 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 ZNF765Q7L2R6 523 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 ST13P4Q8IZP2 240 aaPredicted RBP6.09□□□□□ -1.43
RFC1-201ENST00000349703 SMC1BQ8NDV3 1235 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 TMEM104Q8NE00 496 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 ITFG2Q969R8 447 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 AIFM3Q96NN9 605 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 FAM96AQ9H5X1 160 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 NANSQ9NR45 359 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 PDP2Q9P2J9 529 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 PI4KBQ9UBF8 816 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 GRIN2DO15399 1336 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 PTPRUQ92729 1446 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 CPED1A4D0V7 1026 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 NT5C1B-RDH14C9J2C7 533 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 H3BMM5 538 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 RASGRF2O14827 1237 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 RGS13O14921 159 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 MAPK13O15264 365 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 DNPH1O43598 174 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 PHF2O75151 1096 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 PALMO75781 387 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 RECQL4O94761 1208 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 TFRCP02786 760 aaKnown RBP6.09□□□□□ -1.43
RFC1-201ENST00000349703 EBLN1P0CF75 366 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 PRKCAP17252 672 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 RAD52P43351 418 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 PIK3CGP48736 1102 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 RTP1P59025 263 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 SLC25A3Q00325 362 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 TYW3Q6IPR3 259 aaKnown RBP6.09□□□□□ -1.43
RFC1-201ENST00000349703 CRTC1Q6UUV9 634 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 ARHGAP22Q7Z5H3 698 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 TAF8Q7Z7C8 310 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 SVOPQ8N4V2 548 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 MFSD2AQ8NA29 543 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 DPF1Q92782 380 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 NXPE3Q969Y0 559 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 CEP72Q9P209 647 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 TUBD1Q9UJT1 453 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 KCND3Q9UK17 655 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 PCDHA10Q9Y5I2 948 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 MAU2Q9Y6X3 613 aa6.09□□□□□ -1.43
RFC1-201ENST00000349703 ANXA2P07355 339 aaKnown RBP6.09□□□□□ -1.44
RFC1-201ENST00000349703 THBS1P07996 1170 aa6.09□□□□□ -1.44
RFC1-201ENST00000349703 MGAT1P26572 445 aa6.09□□□□□ -1.44
RFC1-201ENST00000349703 HSD17B3P37058 310 aa6.09□□□□□ -1.44
RFC1-201ENST00000349703 RPL21P46778 160 aaKnown RBP6.09□□□□□ -1.44
RFC1-201ENST00000349703 PTDSS1P48651 473 aaKnown RBP6.09□□□□□ -1.44
RFC1-201ENST00000349703 FNTAP49354 379 aa6.09□□□□□ -1.44
RFC1-201ENST00000349703 SMSP52788 366 aa6.09□□□□□ -1.44
RFC1-201ENST00000349703 PHEXP78562 749 aa6.09□□□□□ -1.44
RFC1-201ENST00000349703 LRRC63Q05C16 580 aa6.09□□□□□ -1.44
RFC1-201ENST00000349703 PPATQ06203 517 aa6.09□□□□□ -1.44
RFC1-201ENST00000349703 ITGB3BPQ13352 177 aaPredicted RBP6.09□□□□□ -1.44
RFC1-201ENST00000349703 SF1Q15637 639 aaKnown RBP6.09□□□□□ -1.44
RFC1-201ENST00000349703 ACKR1Q16570 336 aa6.09□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms