RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 PTPN11Q06124 597 aaPredicted RBP19.01■□□□□ 0.63
SCARF1-202ENST00000348987 SPIDRQ14159 915 aa19.01■□□□□ 0.63
SCARF1-202ENST00000348987 FAM102AQ5T9C2 384 aaPredicted RBP19.01■□□□□ 0.63
SCARF1-202ENST00000348987 XKR5Q6UX68 686 aa19.01■□□□□ 0.63
SCARF1-202ENST00000348987 CYP4V2Q6ZWL3 525 aaPredicted RBP19.01■□□□□ 0.63
SCARF1-202ENST00000348987 FNIP1Q8TF40 1166 aa19.01■□□□□ 0.63
SCARF1-202ENST00000348987 LRTOMTQ8WZ04 291 aa19.01■□□□□ 0.63
SCARF1-202ENST00000348987 PLEKHA8Q96JA3 519 aa19.01■□□□□ 0.63
SCARF1-202ENST00000348987 OSBPL11Q9BXB4 747 aa19.01■□□□□ 0.63
SCARF1-202ENST00000348987 BCO2Q9BYV7 579 aa19.01■□□□□ 0.63
SCARF1-202ENST00000348987 WDR41Q9HAD4 459 aa19.01■□□□□ 0.63
SCARF1-202ENST00000348987 MOCS1Q9NZB8 636 aa19.01■□□□□ 0.63
SCARF1-202ENST00000348987 PSAT1Q9Y617 370 aa19.01■□□□□ 0.63
SCARF1-202ENST00000348987 LACTBL1A8MY62 500 aa19.01■□□□□ 0.63
SCARF1-202ENST00000348987 ACOT8O14734 319 aa19.01■□□□□ 0.63
SCARF1-202ENST00000348987 ATE1O95260 518 aa19.01■□□□□ 0.63
SCARF1-202ENST00000348987 ZBTB11O95625 1053 aaPredicted RBP19.01■□□□□ 0.63
SCARF1-202ENST00000348987 CNTFP26441 200 aa19.01■□□□□ 0.63
SCARF1-202ENST00000348987 PPARGP37231 505 aaPredicted RBP19.01■□□□□ 0.63
SCARF1-202ENST00000348987 CRADDP78560 199 aa19.01■□□□□ 0.63
SCARF1-202ENST00000348987 ATP1A4Q13733 1029 aa19.01■□□□□ 0.63
SCARF1-202ENST00000348987 MAP1SQ66K74 1059 aaPredicted RBP19.01■□□□□ 0.63
SCARF1-202ENST00000348987 JADE1Q6IE81 842 aa19.01■□□□□ 0.63
SCARF1-202ENST00000348987 NANOGP8Q6NSW7 305 aa19.01■□□□□ 0.63
SCARF1-202ENST00000348987 CENPSQ8N2Z9 138 aa19.01■□□□□ 0.63
SCARF1-202ENST00000348987 FIBCD1Q8N539 461 aa19.01■□□□□ 0.63
SCARF1-202ENST00000348987 DDHD1Q8NEL9 900 aa19.01■□□□□ 0.63
SCARF1-202ENST00000348987 ACMSDQ8TDX5 336 aa19.01■□□□□ 0.63
SCARF1-202ENST00000348987 SPATC1LQ9H0A9 340 aa19.01■□□□□ 0.63
SCARF1-202ENST00000348987 FZD8Q9H461 694 aa19.01■□□□□ 0.63
SCARF1-202ENST00000348987 ACSS2Q9NR19 701 aa19.01■□□□□ 0.63
SCARF1-202ENST00000348987 SPATA7Q9P0W8 599 aa19.01■□□□□ 0.63
SCARF1-202ENST00000348987 TRIM17Q9Y577 477 aa19.01■□□□□ 0.63
SCARF1-202ENST00000348987 PCDHB12Q9Y5F1 795 aa19.01■□□□□ 0.63
SCARF1-202ENST00000348987 NR2E3Q9Y5X4 410 aa19.01■□□□□ 0.63
SCARF1-202ENST00000348987 SOCS7O14512 581 aa19■□□□□ 0.63
SCARF1-202ENST00000348987 METTL18O95568 372 aa19■□□□□ 0.63
SCARF1-202ENST00000348987 GPD2P43304 727 aa19■□□□□ 0.63
SCARF1-202ENST00000348987 C21orf59P57076 290 aa19■□□□□ 0.63
SCARF1-202ENST00000348987 TUBA4AP68366 448 aa19■□□□□ 0.63
SCARF1-202ENST00000348987 ZNF829Q3KNS6 432 aaPredicted RBP19■□□□□ 0.63
SCARF1-202ENST00000348987 METTL21CQ5VZV1 264 aa19■□□□□ 0.63
SCARF1-202ENST00000348987 TRPC4APQ8TEL6 797 aa19■□□□□ 0.63
SCARF1-202ENST00000348987 BORCS5Q969J3 196 aa19■□□□□ 0.63
SCARF1-202ENST00000348987 CLK4Q9HAZ1 481 aaKnown RBP19■□□□□ 0.63
SCARF1-202ENST00000348987 VPS45Q9NRW7 570 aa19■□□□□ 0.63
SCARF1-202ENST00000348987 VPS28Q9UK41 221 aa19■□□□□ 0.63
SCARF1-202ENST00000348987 LTBP3Q9NS15 1303 aa19■□□□□ 0.63
SCARF1-202ENST00000348987 CYP3A5P20815 502 aa19■□□□□ 0.63
SCARF1-202ENST00000348987 MAGEA3P43357 314 aa19■□□□□ 0.63
SCARF1-202ENST00000348987 IGBP1P78318 339 aa19■□□□□ 0.63
SCARF1-202ENST00000348987 PRAMEP78395 509 aa19■□□□□ 0.63
SCARF1-202ENST00000348987 ZNF362Q5T0B9 420 aaPredicted RBP19■□□□□ 0.63
SCARF1-202ENST00000348987 SLC9A4Q6AI14 798 aa19■□□□□ 0.63
SCARF1-202ENST00000348987 CASC4Q6P4E1 433 aa19■□□□□ 0.63
SCARF1-202ENST00000348987 RIOX2Q8IUF8 465 aa19■□□□□ 0.63
SCARF1-202ENST00000348987 PGAM4Q8N0Y7 254 aa19■□□□□ 0.63
SCARF1-202ENST00000348987 TDRD5Q8NAT2 981 aaKnown RBP19■□□□□ 0.63
SCARF1-202ENST00000348987 RP9Q8TA86 221 aaKnown RBP19■□□□□ 0.63
SCARF1-202ENST00000348987 CXorf38Q8TB03 319 aa19■□□□□ 0.63
SCARF1-202ENST00000348987 TMA16Q96EY4 203 aaKnown RBP19■□□□□ 0.63
SCARF1-202ENST00000348987 GPATCH1Q9BRR8 931 aaKnown RBP19■□□□□ 0.63
SCARF1-202ENST00000348987 GPATCH2LQ9NWQ4 482 aa19■□□□□ 0.63
SCARF1-202ENST00000348987 TRNAU1APQ9NX07 287 aaKnown RBP19■□□□□ 0.63
SCARF1-202ENST00000348987 FADS3Q9Y5Q0 445 aa19■□□□□ 0.63
SCARF1-202ENST00000348987 WDR27A2RRH5 827 aa18.99■□□□□ 0.63
SCARF1-202ENST00000348987 ESRRGP62508 458 aa18.99■□□□□ 0.63
SCARF1-202ENST00000348987 MBTD1Q05BQ5 628 aa18.99■□□□□ 0.63
SCARF1-202ENST00000348987 EFCAB12Q6NXP0 572 aa18.99■□□□□ 0.63
SCARF1-202ENST00000348987 ZBTB46Q86UZ6 589 aa18.99■□□□□ 0.63
SCARF1-202ENST00000348987 FBXO16Q8IX29 292 aaPredicted RBP18.99■□□□□ 0.63
SCARF1-202ENST00000348987 PLD5Q8N7P1 536 aa18.99■□□□□ 0.63
SCARF1-202ENST00000348987 C12orf29Q8N999 325 aa18.99■□□□□ 0.63
SCARF1-202ENST00000348987 FAM47BQ8NA70 645 aa18.99■□□□□ 0.63
SCARF1-202ENST00000348987 CIB1Q99828 191 aa18.99■□□□□ 0.63
SCARF1-202ENST00000348987 TRPV6Q9H1D0 765 aa18.99■□□□□ 0.63
SCARF1-202ENST00000348987 RPF1Q9H9Y2 349 aaKnown RBP18.99■□□□□ 0.63
SCARF1-202ENST00000348987 TXNRD2Q9NNW7 524 aa18.99■□□□□ 0.63
SCARF1-202ENST00000348987 PIH1D1Q9NWS0 290 aaKnown RBP18.99■□□□□ 0.63
SCARF1-202ENST00000348987 F5H423 210 aaPredicted RBP18.99■□□□□ 0.63
SCARF1-202ENST00000348987 MED7O43513 233 aa18.99■□□□□ 0.63
SCARF1-202ENST00000348987 CILPO75339 1184 aa18.99■□□□□ 0.63
SCARF1-202ENST00000348987 BMP10O95393 424 aa18.99■□□□□ 0.63
SCARF1-202ENST00000348987 TYK2P29597 1187 aa18.99■□□□□ 0.63
SCARF1-202ENST00000348987 ART3Q13508 389 aa18.99■□□□□ 0.63
SCARF1-202ENST00000348987 SURF1Q15526 300 aa18.99■□□□□ 0.63
SCARF1-202ENST00000348987 LSM12Q3MHD2 195 aaKnown RBP18.99■□□□□ 0.63
SCARF1-202ENST00000348987 C16orf87Q6PH81 154 aa18.99■□□□□ 0.63
SCARF1-202ENST00000348987 PQLC3Q8N755 202 aa18.99■□□□□ 0.63
SCARF1-202ENST00000348987 MCRS1Q96EZ8 462 aa18.99■□□□□ 0.63
SCARF1-202ENST00000348987 HEXIM2Q96MH2 286 aaKnown RBP18.99■□□□□ 0.63
SCARF1-202ENST00000348987 AP4S1Q9Y587 144 aa18.99■□□□□ 0.63
SCARF1-202ENST00000348987 SNX13Q9Y5W8 968 aa18.99■□□□□ 0.63
SCARF1-202ENST00000348987 CROCCQ5TZA2 2017 aa18.99■□□□□ 0.63
SCARF1-202ENST00000348987 HMGCRP04035 888 aa18.98■□□□□ 0.63
SCARF1-202ENST00000348987 TGFB3P10600 412 aa18.98■□□□□ 0.63
SCARF1-202ENST00000348987 ZNF12P17014 697 aa18.98■□□□□ 0.63
SCARF1-202ENST00000348987 GABRB3P28472 473 aa18.98■□□□□ 0.63
SCARF1-202ENST00000348987 TMED10P49755 219 aaKnown RBP18.98■□□□□ 0.63
SCARF1-202ENST00000348987 NUMBP49757 651 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms