RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 ACOD1A6NK06 481 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 EPCAMP16422 314 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 ATF3P18847 181 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 ACSL1P33121 698 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 KCNJ2P63252 427 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 VEPH1Q14D04 833 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 DPF1Q92782 380 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 KAT2AQ92830 837 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 RACGAP1Q9H0H5 632 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.82□□□□□ -1.8
SYNE2-202ENST00000344113 FKBP7Q9Y680 259 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 DDR2Q16832 855 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 TMEM67Q5HYA8 995 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 METTL3Q86U44 580 aaKnown RBP3.82□□□□□ -1.8
SYNE2-202ENST00000344113 IQCHQ86VS3 1027 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 TMEM35BQ8NCS4 154 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 TM9SF2Q99805 663 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 VPS33BQ9H267 617 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 ADD3Q9UEY8 706 aaKnown RBP3.82□□□□□ -1.8
SYNE2-202ENST00000344113 MEMO1Q9Y316 297 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 DNAJB2P25686 324 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 RPS5P46782 204 aaKnown RBP3.82□□□□□ -1.8
SYNE2-202ENST00000344113 GPR143P51810 404 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 ERO1BQ86YB8 467 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 HPS6Q86YV9 775 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 NGLY1Q96IV0 654 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 RNF38Q9H0F5 515 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 TRNAU1APQ9NX07 287 aaKnown RBP3.82□□□□□ -1.8
SYNE2-202ENST00000344113 IQGAP2Q13576 1575 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 EFCAB7A8K855 629 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 KHDRBS3O75525 346 aaKnown RBP3.82□□□□□ -1.8
SYNE2-202ENST00000344113 FADS2O95864 444 aaKnown RBP3.82□□□□□ -1.8
SYNE2-202ENST00000344113 RRM1P23921 792 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 C2orf54Q08AI8 447 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 IDNKQ5T6J7 187 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 ZNF704Q6ZNC4 412 aaPredicted RBP3.82□□□□□ -1.8
SYNE2-202ENST00000344113 METTL16Q86W50 562 aaKnown RBP3.82□□□□□ -1.8
SYNE2-202ENST00000344113 UPB1Q9UBR1 384 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 C3orf18Q9UK00 162 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 IVNS1ABPQ9Y6Y0 642 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 SEC16AO15027 2179 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 ZNF233A6NK53 670 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 C1orf196B1AJZ1 125 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 RBL1P28749 1068 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 NCKAP1LP55160 1127 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 GHRHRQ02643 423 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 CRTC1Q6UUV9 634 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 PYROXD2Q8N2H3 581 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 NEK6Q9HC98 313 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 STARD7Q9NQZ5 370 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 SH3GLB2Q9NR46 395 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 TAGLN3Q9UI15 199 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 ESYT3A0FGR9 886 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 PRPF4O43172 522 aaKnown RBP eCLIP3.82□□□□□ -1.8
SYNE2-202ENST00000344113 HOXD11P31277 338 aaPredicted RBP3.82□□□□□ -1.8
SYNE2-202ENST00000344113 NCALDP61601 193 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 DNLZQ5SXM8 178 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 CLVS2Q5SYC1 327 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 STRIP1Q5VSL9 837 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 CEP97Q8IW35 865 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 JDP2Q8WYK2 163 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 SGCDQ92629 289 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 AP2M1Q96CW1 435 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 TSPAN17Q96FV3 270 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 ABCB9Q9NP78 766 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 FANCLQ9NW38 375 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 TBC1D7Q9P0N9 293 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 PCDHA5Q9Y5H7 936 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 WDR64B1ANS9 1081 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 H0Y8G0 127 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 TM7SF2O76062 418 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 MYL2P10916 166 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 MYL9P24844 172 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 ADSSP30520 456 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 EIF4A1P60842 406 aaKnown RBP3.82□□□□□ -1.8
SYNE2-202ENST00000344113 PDK4Q16654 411 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 PIK3R6Q5UE93 754 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 TTC23Q5W5X9 447 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 PNMA1Q8ND90 353 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 ZNF606Q8WXB4 792 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 TDRD9Q8NDG6 1382 aaKnown RBP3.82□□□□□ -1.8
SYNE2-202ENST00000344113 PTPN23Q9H3S7 1636 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 AKAP10O43572 662 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 ANXA1P04083 346 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 CDK4P11802 303 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 PIK3CGP48736 1102 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 RBM48Q5RL73 367 aaKnown RBP3.82□□□□□ -1.8
SYNE2-202ENST00000344113 OR14K1Q8NGZ2 314 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 REEP2Q9BRK0 252 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 PTPRUQ92729 1446 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 DAOP14920 347 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 RAC2P15153 192 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 MAT2AP31153 395 aaKnown RBP3.82□□□□□ -1.8
SYNE2-202ENST00000344113 ZNF33BQ06732 778 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 STYK1Q6J9G0 422 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 DHDDSQ86SQ9 333 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 THNSL1Q8IYQ7 743 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 GUF1Q8N442 669 aaKnown RBP3.82□□□□□ -1.8
SYNE2-202ENST00000344113 COQ8AQ8NI60 647 aa3.82□□□□□ -1.8
SYNE2-202ENST00000344113 SPOCK2Q92563 424 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms