RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 SGPL1O95470 568 aa9.83□□□□□ -0.84
PTCHD4-201ENST00000339488 M6PRP20645 277 aa9.83□□□□□ -0.84
PTCHD4-201ENST00000339488 CD40LGP29965 261 aa9.83□□□□□ -0.84
PTCHD4-201ENST00000339488 HAAOP46952 286 aa9.83□□□□□ -0.84
PTCHD4-201ENST00000339488 CENPAP49450 140 aa9.83□□□□□ -0.84
PTCHD4-201ENST00000339488 IDH3AP50213 366 aa9.83□□□□□ -0.84
PTCHD4-201ENST00000339488 IKQ13123 557 aaPredicted RBP9.83□□□□□ -0.84
PTCHD4-201ENST00000339488 NHSL2Q5HYW2 709 aa9.83□□□□□ -0.84
PTCHD4-201ENST00000339488 PIGZQ86VD9 579 aa9.83□□□□□ -0.84
PTCHD4-201ENST00000339488 GPBP1Q86WP2 473 aa9.83□□□□□ -0.84
PTCHD4-201ENST00000339488 IFNL1Q8IU54 200 aa9.83□□□□□ -0.84
PTCHD4-201ENST00000339488 SAMD14Q8IZD0 417 aaPredicted RBP9.83□□□□□ -0.84
PTCHD4-201ENST00000339488 DSELQ8IZU8 1212 aa9.83□□□□□ -0.84
PTCHD4-201ENST00000339488 LRRC20Q8TCA0 184 aa9.83□□□□□ -0.84
PTCHD4-201ENST00000339488 MOCOSQ96EN8 888 aa9.83□□□□□ -0.84
PTCHD4-201ENST00000339488 JMJD4Q9H9V9 463 aa9.83□□□□□ -0.84
PTCHD4-201ENST00000339488 GPBP1L1Q9HC44 474 aaPredicted RBP9.83□□□□□ -0.84
PTCHD4-201ENST00000339488 PRDM11Q9NQV5 511 aa9.83□□□□□ -0.84
PTCHD4-201ENST00000339488 CYP26B1Q9NR63 512 aa9.83□□□□□ -0.84
PTCHD4-201ENST00000339488 ANAPC7Q9UJX3 599 aa9.83□□□□□ -0.84
PTCHD4-201ENST00000339488 PSME2Q9UL46 239 aa9.83□□□□□ -0.84
PTCHD4-201ENST00000339488 EIF3LQ9Y262 564 aaKnown RBP9.83□□□□□ -0.84
PTCHD4-201ENST00000339488 COL22A1Q8NFW1 1626 aaPredicted RBP9.83□□□□□ -0.84
PTCHD4-201ENST00000339488 GAS2O43903 313 aaKnown RBP9.82□□□□□ -0.84
PTCHD4-201ENST00000339488 OR7A10O76100 309 aa9.82□□□□□ -0.84
PTCHD4-201ENST00000339488 MMP8P22894 467 aa9.82□□□□□ -0.84
PTCHD4-201ENST00000339488 PIK3R1P27986 724 aa9.82□□□□□ -0.84
PTCHD4-201ENST00000339488 ELK4P28324 431 aa9.82□□□□□ -0.84
PTCHD4-201ENST00000339488 GTF2E2P29084 291 aaKnown RBP9.82□□□□□ -0.84
PTCHD4-201ENST00000339488 GJA9P57773 515 aa9.82□□□□□ -0.84
PTCHD4-201ENST00000339488 BAATQ14032 418 aaPredicted RBP9.82□□□□□ -0.84
PTCHD4-201ENST00000339488 HIF1AQ16665 826 aa9.82□□□□□ -0.84
PTCHD4-201ENST00000339488 ATP13A4Q4VNC1 1196 aa9.82□□□□□ -0.84
PTCHD4-201ENST00000339488 EPC2Q52LR7 807 aa9.82□□□□□ -0.84
PTCHD4-201ENST00000339488 ZNF600Q6ZNG1 722 aa9.82□□□□□ -0.84
PTCHD4-201ENST00000339488 RELL1Q8IUW5 271 aa9.82□□□□□ -0.84
PTCHD4-201ENST00000339488 PALM2Q8IXS6 379 aa9.82□□□□□ -0.84
PTCHD4-201ENST00000339488 CBR4Q8N4T8 237 aa9.82□□□□□ -0.84
PTCHD4-201ENST00000339488 GLB1L3Q8NCI6 653 aaPredicted RBP9.82□□□□□ -0.84
PTCHD4-201ENST00000339488 SNAPC3Q92966 411 aa9.82□□□□□ -0.84
PTCHD4-201ENST00000339488 CMTM5Q96DZ9 223 aa9.82□□□□□ -0.84
PTCHD4-201ENST00000339488 ANO3Q9BYT9 981 aa9.82□□□□□ -0.84
PTCHD4-201ENST00000339488 SSU72Q9NP77 194 aaKnown RBP9.82□□□□□ -0.84
PTCHD4-201ENST00000339488 C20orf96Q9NUD7 363 aaPredicted RBP9.82□□□□□ -0.84
PTCHD4-201ENST00000339488 PCSK1NQ9UHG2 260 aa9.82□□□□□ -0.84
PTCHD4-201ENST00000339488 RNF112Q9ULX5 631 aa9.82□□□□□ -0.84
PTCHD4-201ENST00000339488 RIPK3Q9Y572 518 aa9.82□□□□□ -0.84
PTCHD4-201ENST00000339488 ATRNO75882 1429 aa9.82□□□□□ -0.84
PTCHD4-201ENST00000339488 CAMTA1Q9Y6Y1 1673 aa9.82□□□□□ -0.84
PTCHD4-201ENST00000339488 BAZ2AQ9UIF9 1905 aaKnown RBP9.82□□□□□ -0.84
PTCHD4-201ENST00000339488 SLC9A3R1O14745 358 aaPredicted RBP9.82□□□□□ -0.84
PTCHD4-201ENST00000339488 ZBTB39O15060 712 aa9.82□□□□□ -0.84
PTCHD4-201ENST00000339488 SYNCRIPO60506 623 aaKnown RBP9.82□□□□□ -0.84
PTCHD4-201ENST00000339488 BCAS1O75363 584 aaPredicted RBP9.82□□□□□ -0.84
PTCHD4-201ENST00000339488 KATNA1O75449 491 aa9.82□□□□□ -0.84
PTCHD4-201ENST00000339488 INHBAP08476 426 aa9.82□□□□□ -0.84
PTCHD4-201ENST00000339488 CCND2P30279 289 aa9.82□□□□□ -0.84
PTCHD4-201ENST00000339488 PKLRP30613 574 aa9.82□□□□□ -0.84
PTCHD4-201ENST00000339488 RRM2P31350 389 aa9.82□□□□□ -0.84
PTCHD4-201ENST00000339488 L1CAMP32004 1257 aa9.82□□□□□ -0.84
PTCHD4-201ENST00000339488 ARRB2P32121 409 aa9.82□□□□□ -0.84
PTCHD4-201ENST00000339488 TGFBR1P36897 503 aa9.82□□□□□ -0.84
PTCHD4-201ENST00000339488 SERPINH1P50454 418 aaKnown RBP9.82□□□□□ -0.84
PTCHD4-201ENST00000339488 TNFAIP2Q03169 654 aa9.82□□□□□ -0.84
PTCHD4-201ENST00000339488 CETN1Q12798 172 aa9.82□□□□□ -0.84
PTCHD4-201ENST00000339488 COG2Q14746 738 aa9.82□□□□□ -0.84
PTCHD4-201ENST00000339488 HERC3Q15034 1050 aa9.82□□□□□ -0.84
PTCHD4-201ENST00000339488 CALCRLQ16602 461 aa9.82□□□□□ -0.84
PTCHD4-201ENST00000339488 RINT1Q6NUQ1 792 aa9.82□□□□□ -0.84
PTCHD4-201ENST00000339488 METTL2BQ6P1Q9 378 aaKnown RBP9.82□□□□□ -0.84
PTCHD4-201ENST00000339488 CHSY3Q70JA7 882 aa9.82□□□□□ -0.84
PTCHD4-201ENST00000339488 HAUS6Q7Z4H7 955 aa9.82□□□□□ -0.84
PTCHD4-201ENST00000339488 FAM9CQ8IZT9 166 aa9.82□□□□□ -0.84
PTCHD4-201ENST00000339488 NDNFQ8TB73 568 aa9.82□□□□□ -0.84
PTCHD4-201ENST00000339488 HDAC11Q96DB2 347 aa9.82□□□□□ -0.84
PTCHD4-201ENST00000339488 RUSC1Q9BVN2 902 aa9.82□□□□□ -0.84
PTCHD4-201ENST00000339488 ZNF341Q9BYN7 854 aa9.82□□□□□ -0.84
PTCHD4-201ENST00000339488 SAE1Q9UBE0 346 aaPredicted RBP9.82□□□□□ -0.84
PTCHD4-201ENST00000339488 TCAF1Q9Y4C2 921 aa9.82□□□□□ -0.84
PTCHD4-201ENST00000339488 PCDHA2Q9Y5H9 948 aa9.82□□□□□ -0.84
PTCHD4-201ENST00000339488 BCORQ6W2J9 1755 aa9.82□□□□□ -0.84
PTCHD4-201ENST00000339488 SPEF2Q9C093 1822 aa9.82□□□□□ -0.84
PTCHD4-201ENST00000339488 EML1O00423 815 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 ACOX3O15254 700 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 SLC4A1P02730 911 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 RBL1P28749 1068 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 RFC4P35249 363 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 ABCE1P61221 599 aaKnown RBP9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 KLF10Q13118 480 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 MMRN1Q13201 1228 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 NXNL2Q5VZ03 156 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 PM20D1Q6GTS8 502 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 SULT1C3Q6IMI6 304 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 LRP10Q7Z4F1 713 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 PPM1NQ8N819 430 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 FAM71DQ8N9W8 422 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 OR13F1Q8NGS4 319 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 SLC22A8Q8TCC7 542 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 FNIP1Q8TF40 1166 aa9.81□□□□□ -0.84
PTCHD4-201ENST00000339488 TFAP2CQ92754 450 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms