RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 ZDHHC2Q9UIJ5 367 aa18.21■□□□□ 0.51
PRKCB-202ENST00000321728 ADAM28Q9UKQ2 775 aa18.21■□□□□ 0.51
PRKCB-202ENST00000321728 MAGED2Q9UNF1 606 aaPredicted RBP18.21■□□□□ 0.51
PRKCB-202ENST00000321728 TRIP11Q15643 1979 aa18.21■□□□□ 0.51
PRKCB-202ENST00000321728 TK2O00142 265 aa18.21■□□□□ 0.51
PRKCB-202ENST00000321728 SLC22A2O15244 555 aa18.21■□□□□ 0.51
PRKCB-202ENST00000321728 TOMM70O94826 608 aa18.21■□□□□ 0.51
PRKCB-202ENST00000321728 MPOP05164 745 aa18.21■□□□□ 0.51
PRKCB-202ENST00000321728 JUNP05412 331 aaKnown RBP18.21■□□□□ 0.51
PRKCB-202ENST00000321728 VARSP26640 1264 aaKnown RBP18.21■□□□□ 0.51
PRKCB-202ENST00000321728 PRAMEP78395 509 aa18.21■□□□□ 0.51
PRKCB-202ENST00000321728 SLC6A3Q01959 620 aa18.21■□□□□ 0.51
PRKCB-202ENST00000321728 DPYSL2Q16555 572 aa18.21■□□□□ 0.51
PRKCB-202ENST00000321728 MTX3Q5HYI7 312 aa18.21■□□□□ 0.51
PRKCB-202ENST00000321728 LCLAT1Q6UWP7 414 aa18.21■□□□□ 0.51
PRKCB-202ENST00000321728 GPR141Q7Z602 305 aa18.21■□□□□ 0.51
PRKCB-202ENST00000321728 SLC29A1Q99808 456 aa18.21■□□□□ 0.51
PRKCB-202ENST00000321728 ACE2Q9BYF1 805 aaPredicted RBP18.21■□□□□ 0.51
PRKCB-202ENST00000321728 B3GNT5Q9BYG0 378 aa18.21■□□□□ 0.51
PRKCB-202ENST00000321728 PRDM16Q9HAZ2 1276 aa18.21■□□□□ 0.51
PRKCB-202ENST00000321728 EBF1Q9UH73 591 aa18.21■□□□□ 0.51
PRKCB-202ENST00000321728 CROCCQ5TZA2 2017 aa18.2■□□□□ 0.5
PRKCB-202ENST00000321728 PFKMP08237 780 aa18.2■□□□□ 0.5
PRKCB-202ENST00000321728 RPL10P27635 214 aaKnown RBP18.2■□□□□ 0.5
PRKCB-202ENST00000321728 MAGEA12P43365 314 aa18.2■□□□□ 0.5
PRKCB-202ENST00000321728 CD97P48960 835 aa18.2■□□□□ 0.5
PRKCB-202ENST00000321728 STAT5BP51692 787 aa18.2■□□□□ 0.5
PRKCB-202ENST00000321728 NAGLUP54802 743 aa18.2■□□□□ 0.5
PRKCB-202ENST00000321728 ESRRGP62508 458 aa18.2■□□□□ 0.5
PRKCB-202ENST00000321728 SPANXN3Q5MJ09 141 aa18.2■□□□□ 0.5
PRKCB-202ENST00000321728 NCBP2-AS2Q69YL0 99 aa18.2■□□□□ 0.5
PRKCB-202ENST00000321728 SAMD7Q7Z3H4 446 aa18.2■□□□□ 0.5
PRKCB-202ENST00000321728 FAM83AQ86UY5 434 aa18.2■□□□□ 0.5
PRKCB-202ENST00000321728 TRIM50Q86XT4 487 aa18.2■□□□□ 0.5
PRKCB-202ENST00000321728 PPWD1Q96BP3 646 aaKnown RBP18.2■□□□□ 0.5
PRKCB-202ENST00000321728 ASB9Q96DX5 294 aa18.2■□□□□ 0.5
PRKCB-202ENST00000321728 KCTD15Q96SI1 283 aaPredicted RBP18.2■□□□□ 0.5
PRKCB-202ENST00000321728 DRC3Q9H069 523 aa18.2■□□□□ 0.5
PRKCB-202ENST00000321728 CLK4Q9HAZ1 481 aaKnown RBP18.2■□□□□ 0.5
PRKCB-202ENST00000321728 PICK1Q9NRD5 415 aa18.2■□□□□ 0.5
PRKCB-202ENST00000321728 AFG3L2Q9Y4W6 797 aa18.2■□□□□ 0.5
PRKCB-202ENST00000321728 COPG1Q9Y678 874 aaKnown RBP18.2■□□□□ 0.5
PRKCB-202ENST00000321728 TCAF2A6NFQ2 919 aa18.2■□□□□ 0.5
PRKCB-202ENST00000321728 TFPTP0C1Z6 253 aa18.2■□□□□ 0.5
PRKCB-202ENST00000321728 GOT1P17174 413 aa18.2■□□□□ 0.5
PRKCB-202ENST00000321728 CXCL9Q07325 125 aa18.2■□□□□ 0.5
PRKCB-202ENST00000321728 ITGA7Q13683 1181 aa18.2■□□□□ 0.5
PRKCB-202ENST00000321728 HERC3Q15034 1050 aa18.2■□□□□ 0.5
PRKCB-202ENST00000321728 NBPF12Q5TAG4 269 aaPredicted RBP18.2■□□□□ 0.5
PRKCB-202ENST00000321728 JADE1Q6IE81 842 aa18.2■□□□□ 0.5
PRKCB-202ENST00000321728 DHRS4L2Q6PKH6 230 aa18.2■□□□□ 0.5
PRKCB-202ENST00000321728 CCNYQ8ND76 341 aa18.2■□□□□ 0.5
PRKCB-202ENST00000321728 HPDLQ96IR7 371 aa18.2■□□□□ 0.5
PRKCB-202ENST00000321728 RANBP9Q96S59 729 aa18.2■□□□□ 0.5
PRKCB-202ENST00000321728 PCYT2Q99447 389 aa18.2■□□□□ 0.5
PRKCB-202ENST00000321728 CYP3A43Q9HB55 503 aa18.2■□□□□ 0.5
PRKCB-202ENST00000321728 BARX2Q9UMQ3 279 aaPredicted RBP18.2■□□□□ 0.5
PRKCB-202ENST00000321728 LACTBL1A8MY62 500 aa18.19■□□□□ 0.5
PRKCB-202ENST00000321728 H0YJX3 145 aa18.19■□□□□ 0.5
PRKCB-202ENST00000321728 FOXD2O60548 495 aaPredicted RBP18.19■□□□□ 0.5
PRKCB-202ENST00000321728 USP12O75317 370 aa18.19■□□□□ 0.5
PRKCB-202ENST00000321728 GLRBP48167 497 aa18.19■□□□□ 0.5
PRKCB-202ENST00000321728 PSME3P61289 254 aa18.19■□□□□ 0.5
PRKCB-202ENST00000321728 PRKAA1Q13131 559 aa18.19■□□□□ 0.5
PRKCB-202ENST00000321728 TRIM25Q14258 630 aaKnown RBP18.19■□□□□ 0.5
PRKCB-202ENST00000321728 RFTN1Q14699 578 aaPredicted RBP18.19■□□□□ 0.5
PRKCB-202ENST00000321728 TMEM132BQ14DG7 1078 aa18.19■□□□□ 0.5
PRKCB-202ENST00000321728 CNTD1Q8N815 330 aa18.19■□□□□ 0.5
PRKCB-202ENST00000321728 SCYL1Q96KG9 808 aa18.19■□□□□ 0.5
PRKCB-202ENST00000321728 NOL11Q9H8H0 719 aaKnown RBP18.19■□□□□ 0.5
PRKCB-202ENST00000321728 MYOZ2Q9NPC6 264 aa18.19■□□□□ 0.5
PRKCB-202ENST00000321728 MGAMO43451 1857 aa18.19■□□□□ 0.5
PRKCB-202ENST00000321728 KCNU1A8MYU2 1149 aa18.19■□□□□ 0.5
PRKCB-202ENST00000321728 PLOD2O00469 737 aa18.19■□□□□ 0.5
PRKCB-202ENST00000321728 PAPSS1O43252 624 aaPredicted RBP18.19■□□□□ 0.5
PRKCB-202ENST00000321728 PROZP22891 400 aa18.19■□□□□ 0.5
PRKCB-202ENST00000321728 ADSLP30566 484 aaPredicted RBP18.19■□□□□ 0.5
PRKCB-202ENST00000321728 TUBA4AP68366 448 aa18.19■□□□□ 0.5
PRKCB-202ENST00000321728 ANKDD1AQ495B1 522 aa18.19■□□□□ 0.5
PRKCB-202ENST00000321728 FKBP1CQ5VVH2 108 aa18.19■□□□□ 0.5
PRKCB-202ENST00000321728 IER5Q5VY09 327 aa18.19■□□□□ 0.5
PRKCB-202ENST00000321728 LIPMQ5VYY2 423 aa18.19■□□□□ 0.5
PRKCB-202ENST00000321728 CYP2R1Q6VVX0 501 aa18.19■□□□□ 0.5
PRKCB-202ENST00000321728 CLEC14AQ86T13 490 aa18.19■□□□□ 0.5
PRKCB-202ENST00000321728 HERC6Q8IVU3 1022 aa18.19■□□□□ 0.5
PRKCB-202ENST00000321728 PYROXD2Q8N2H3 581 aa18.19■□□□□ 0.5
PRKCB-202ENST00000321728 FAM47BQ8NA70 645 aa18.19■□□□□ 0.5
PRKCB-202ENST00000321728 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.19■□□□□ 0.5
PRKCB-202ENST00000321728 OR52K1Q8NGK4 314 aa18.19■□□□□ 0.5
PRKCB-202ENST00000321728 KHSRPQ92945 711 aaKnown RBP eCLIP18.19■□□□□ 0.52e-6■□□□□ 10.1
PRKCB-202ENST00000321728 ISL2Q96A47 359 aa18.19■□□□□ 0.5
PRKCB-202ENST00000321728 P2RY11Q96G91 374 aa18.19■□□□□ 0.5
PRKCB-202ENST00000321728 ZNF385DQ9H6B1 395 aa18.19■□□□□ 0.5
PRKCB-202ENST00000321728 EIF2B3Q9NR50 452 aaKnown RBP18.19■□□□□ 0.5
PRKCB-202ENST00000321728 IGSF9Q9P2J2 1179 aa18.19■□□□□ 0.5
PRKCB-202ENST00000321728 ZNHIT2Q9UHR6 403 aa18.19■□□□□ 0.5
PRKCB-202ENST00000321728 C9IYK1 514 aa18.18■□□□□ 0.5
PRKCB-202ENST00000321728 IL18RAPO95256 599 aa18.18■□□□□ 0.5
PRKCB-202ENST00000321728 MCF2P10911 925 aa18.18■□□□□ 0.5
PRKCB-202ENST00000321728 PGGT1BP53609 377 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms