RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 APOFQ13790 326 aa19.46■□□□□ 0.71
RTN4-201ENST00000317610 KCTD11Q693B1 232 aa19.46■□□□□ 0.71
RTN4-201ENST00000317610 B3GNT6Q6ZMB0 384 aa19.46■□□□□ 0.71
RTN4-201ENST00000317610 NT5C3BQ969T7 300 aa19.46■□□□□ 0.71
RTN4-201ENST00000317610 RCN3Q96D15 328 aa19.46■□□□□ 0.71
RTN4-201ENST00000317610 C1QTNF1Q9BXJ1 281 aa19.46■□□□□ 0.71
RTN4-201ENST00000317610 ACE2Q9BYF1 805 aaPredicted RBP19.46■□□□□ 0.71
RTN4-201ENST00000317610 VTI1BQ9UEU0 232 aa19.46■□□□□ 0.71
RTN4-201ENST00000317610 ANKRD6Q9Y2G4 727 aa19.46■□□□□ 0.71
RTN4-201ENST00000317610 PPP2R3BQ9Y5P8 575 aa19.46■□□□□ 0.71
RTN4-201ENST00000317610 STRNO43815 780 aa19.46■□□□□ 0.71
RTN4-201ENST00000317610 CAPN15O75808 1086 aa19.46■□□□□ 0.71
RTN4-201ENST00000317610 BCAS2O75934 225 aaPredicted RBP19.46■□□□□ 0.71
RTN4-201ENST00000317610 CABYRO75952 493 aa19.46■□□□□ 0.71
RTN4-201ENST00000317610 SBK3P0C264 359 aa19.46■□□□□ 0.71
RTN4-201ENST00000317610 HADHAP40939 763 aa19.46■□□□□ 0.71
RTN4-201ENST00000317610 MS4A2Q01362 244 aa19.46■□□□□ 0.71
RTN4-201ENST00000317610 PRKAA1Q13131 559 aa19.46■□□□□ 0.71
RTN4-201ENST00000317610 ITGA7Q13683 1181 aa19.46■□□□□ 0.71
RTN4-201ENST00000317610 NADK2Q4G0N4 442 aa19.46■□□□□ 0.71
RTN4-201ENST00000317610 HSP90AA5PQ58FG0 334 aa19.46■□□□□ 0.71
RTN4-201ENST00000317610 AGR3Q8TD06 166 aa19.46■□□□□ 0.71
RTN4-201ENST00000317610 KLHL8Q9P2G9 620 aaPredicted RBP19.46■□□□□ 0.71
RTN4-201ENST00000317610 TUBGCP4Q9UGJ1 667 aa19.46■□□□□ 0.71
RTN4-201ENST00000317610 PCDHGB4Q9UN71 923 aa19.46■□□□□ 0.71
RTN4-201ENST00000317610 PCDHGB5Q9Y5G0 923 aa19.46■□□□□ 0.71
RTN4-201ENST00000317610 SLCO1B7G3V0H7 640 aa19.45■□□□□ 0.7
RTN4-201ENST00000317610 SLC25A27O95847 323 aa19.45■□□□□ 0.7
RTN4-201ENST00000317610 SRGAP2BP0DMP2 458 aa19.45■□□□□ 0.7
RTN4-201ENST00000317610 EPHA3P29320 983 aa19.45■□□□□ 0.7
RTN4-201ENST00000317610 DCAF4L1Q3SXM0 396 aa19.45■□□□□ 0.7
RTN4-201ENST00000317610 TMEM259Q4ZIN3 620 aa19.45■□□□□ 0.7
RTN4-201ENST00000317610 ACVR1CQ8NER5 493 aa19.45■□□□□ 0.7
RTN4-201ENST00000317610 VPS39Q96JC1 886 aa19.45■□□□□ 0.7
RTN4-201ENST00000317610 SNX27Q96L92 541 aa19.45■□□□□ 0.7
RTN4-201ENST00000317610 TMPRSS4Q9NRS4 437 aa19.45■□□□□ 0.7
RTN4-201ENST00000317610 PADI4Q9UM07 663 aa19.45■□□□□ 0.7
RTN4-201ENST00000317610 TSC2P49815 1807 aa19.45■□□□□ 0.7
RTN4-201ENST00000317610 ERI2A8K979 691 aaKnown RBP19.45■□□□□ 0.7
RTN4-201ENST00000317610 NEMP1O14524 444 aa19.45■□□□□ 0.7
RTN4-201ENST00000317610 F7P08709 466 aaPredicted RBP19.45■□□□□ 0.7
RTN4-201ENST00000317610 TFEBP19484 476 aa19.45■□□□□ 0.7
RTN4-201ENST00000317610 ME2P23368 584 aa19.45■□□□□ 0.7
RTN4-201ENST00000317610 DPP6P42658 865 aa19.45■□□□□ 0.7
RTN4-201ENST00000317610 GRIA4P48058 902 aa19.45■□□□□ 0.7
RTN4-201ENST00000317610 ARL13AQ5H913 290 aaPredicted RBP19.45■□□□□ 0.7
RTN4-201ENST00000317610 KLHDC10Q6PID8 442 aa19.45■□□□□ 0.7
RTN4-201ENST00000317610 LCA5Q86VQ0 697 aa19.45■□□□□ 0.7
RTN4-201ENST00000317610 KCNMB4Q86W47 210 aa19.45■□□□□ 0.7
RTN4-201ENST00000317610 TP53INP2Q8IXH6 220 aa19.45■□□□□ 0.7
RTN4-201ENST00000317610 CNKSR2Q8WXI2 1034 aa19.45■□□□□ 0.7
RTN4-201ENST00000317610 MFSD3Q96ES6 412 aa19.45■□□□□ 0.7
RTN4-201ENST00000317610 GPR22Q99680 433 aa19.45■□□□□ 0.7
RTN4-201ENST00000317610 SLC2A11Q9BYW1 496 aa19.45■□□□□ 0.7
RTN4-201ENST00000317610 COPS7BQ9H9Q2 264 aaPredicted RBP19.45■□□□□ 0.7
RTN4-201ENST00000317610 SETD4Q9NVD3 440 aa19.45■□□□□ 0.7
RTN4-201ENST00000317610 PPP1R1BQ9UD71 204 aaPredicted RBP19.45■□□□□ 0.7
RTN4-201ENST00000317610 CNOT11Q9UKZ1 510 aaKnown RBP19.45■□□□□ 0.7
RTN4-201ENST00000317610 RAD54BQ9Y620 910 aa19.45■□□□□ 0.7
RTN4-201ENST00000317610 COL1A2P08123 1366 aa19.45■□□□□ 0.7
RTN4-201ENST00000317610 MAGEB16A2A368 324 aa19.44■□□□□ 0.7
RTN4-201ENST00000317610 KCNK1O00180 336 aa19.44■□□□□ 0.7
RTN4-201ENST00000317610 ACOT8O14734 319 aa19.44■□□□□ 0.7
RTN4-201ENST00000317610 USP12O75317 370 aa19.44■□□□□ 0.7
RTN4-201ENST00000317610 USP2O75604 605 aaPredicted RBP19.44■□□□□ 0.7
RTN4-201ENST00000317610 PIGNO95427 931 aa19.44■□□□□ 0.7
RTN4-201ENST00000317610 LGALS2P05162 132 aa19.44■□□□□ 0.7
RTN4-201ENST00000317610 CYP2B6P20813 491 aa19.44■□□□□ 0.7
RTN4-201ENST00000317610 ABCG1P45844 678 aa19.44■□□□□ 0.7
RTN4-201ENST00000317610 VGLL4Q14135 290 aa19.44■□□□□ 0.7
RTN4-201ENST00000317610 TTLL4Q14679 1199 aa19.44■□□□□ 0.7
RTN4-201ENST00000317610 ANO4Q32M45 955 aa19.44■□□□□ 0.7
RTN4-201ENST00000317610 BORAQ6PGQ7 559 aa19.44■□□□□ 0.7
RTN4-201ENST00000317610 CNTD1Q8N815 330 aa19.44■□□□□ 0.7
RTN4-201ENST00000317610 BHLHE22Q8NFJ8 381 aaPredicted RBP19.44■□□□□ 0.7
RTN4-201ENST00000317610 NLRP7Q8WX94 980 aa19.44■□□□□ 0.7
RTN4-201ENST00000317610 LENG1Q96BZ8 264 aaPredicted RBP19.44■□□□□ 0.7
RTN4-201ENST00000317610 CAMKK2Q96RR4 588 aa19.44■□□□□ 0.7
RTN4-201ENST00000317610 NPY6RQ99463 290 aa19.44■□□□□ 0.7
RTN4-201ENST00000317610 PKP2Q99959 881 aa19.44■□□□□ 0.7
RTN4-201ENST00000317610 WDR41Q9HAD4 459 aa19.44■□□□□ 0.7
RTN4-201ENST00000317610 ZBTB26Q9HCK0 441 aa19.44■□□□□ 0.7
RTN4-201ENST00000317610 DMTF1Q9Y222 760 aa19.44■□□□□ 0.7
RTN4-201ENST00000317610 GNEQ9Y223 722 aaKnown RBP19.44■□□□□ 0.7
RTN4-201ENST00000317610 CDYLQ9Y232 598 aa19.44■□□□□ 0.7
RTN4-201ENST00000317610 TMCC1O94876 653 aa19.43■□□□□ 0.7
RTN4-201ENST00000317610 AMHP03971 560 aa19.43■□□□□ 0.7
RTN4-201ENST00000317610 PITX1P78337 314 aaPredicted RBP19.43■□□□□ 0.7
RTN4-201ENST00000317610 C9orf57Q5W0N0 161 aa19.43■□□□□ 0.7
RTN4-201ENST00000317610 TMEM102Q8N9M5 508 aaPredicted RBP19.43■□□□□ 0.7
RTN4-201ENST00000317610 BEST2Q8NFU1 509 aa19.43■□□□□ 0.7
RTN4-201ENST00000317610 DDI1Q8WTU0 396 aa19.43■□□□□ 0.7
RTN4-201ENST00000317610 PDGFCQ9NRA1 345 aa19.43■□□□□ 0.7
RTN4-201ENST00000317610 ZDHHC2Q9UIJ5 367 aa19.43■□□□□ 0.7
RTN4-201ENST00000317610 HES2Q9Y543 173 aa19.43■□□□□ 0.7
RTN4-201ENST00000317610 PAPPA2Q9BXP8 1791 aa19.43■□□□□ 0.7
RTN4-201ENST00000317610 TK2O00142 265 aa19.43■□□□□ 0.7
RTN4-201ENST00000317610 FZD9O00144 591 aa19.43■□□□□ 0.7
RTN4-201ENST00000317610 EEF2KO00418 725 aaKnown RBP19.43■□□□□ 0.7
RTN4-201ENST00000317610 IRF6O14896 467 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms