RNA–Protein interactions for RNA: ENST00000302445.7

KARS-201, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best) BASIC

Gene KARS, Length 2,005 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-201ENST00000302445 SUPT20HL2P0C7V6 817 aa14.09□□□□□ -0.15
KARS-201ENST00000302445 STX5Q13190 355 aa14.09□□□□□ -0.15
KARS-201ENST00000302445 DPYSL2Q16555 572 aa14.09□□□□□ -0.15
KARS-201ENST00000302445 SUPT20HL1Q3ZLR7 823 aa14.09□□□□□ -0.15
KARS-201ENST00000302445 CCDC14Q49A88 953 aa14.09□□□□□ -0.15
KARS-201ENST00000302445 ZNF667Q5HYK9 610 aa14.09□□□□□ -0.15
KARS-201ENST00000302445 CASC4Q6P4E1 433 aa14.09□□□□□ -0.15
KARS-201ENST00000302445 ZYG11AQ6WRX3 759 aa14.09□□□□□ -0.15
KARS-201ENST00000302445 HACD2Q6Y1H2 254 aa14.09□□□□□ -0.15
KARS-201ENST00000302445 DCLK2Q8N568 766 aa14.09□□□□□ -0.15
KARS-201ENST00000302445 TTC39CQ8N584 583 aa14.09□□□□□ -0.15
KARS-201ENST00000302445 TBC1D15Q8TC07 691 aa14.09□□□□□ -0.15
KARS-201ENST00000302445 PNPT1Q8TCS8 783 aaKnown RBP14.09□□□□□ -0.15
KARS-201ENST00000302445 TRUB1Q8WWH5 349 aaKnown RBP14.09□□□□□ -0.15
KARS-201ENST00000302445 ATP6V1E2Q96A05 226 aa14.09□□□□□ -0.15
KARS-201ENST00000302445 MAELQ96JY0 434 aaKnown RBP14.09□□□□□ -0.15
KARS-201ENST00000302445 NIFKQ9BYG3 293 aaKnown RBP14.09□□□□□ -0.15
KARS-201ENST00000302445 VRTNQ9H8Y1 702 aa14.09□□□□□ -0.15
KARS-201ENST00000302445 NMRAL1Q9HBL8 299 aa14.09□□□□□ -0.15
KARS-201ENST00000302445 CD320Q9NPF0 282 aa14.09□□□□□ -0.15
KARS-201ENST00000302445 DUS2Q9NX74 493 aaKnown RBP14.09□□□□□ -0.15
KARS-201ENST00000302445 GIN1Q9NXP7 522 aa14.09□□□□□ -0.15
KARS-201ENST00000302445 EBF1Q9UH73 591 aa14.09□□□□□ -0.15
KARS-201ENST00000302445 PACSIN3Q9UKS6 424 aa14.09□□□□□ -0.15
KARS-201ENST00000302445 HEATR9A2RTY3 570 aa14.08□□□□□ -0.15
KARS-201ENST00000302445 HTR3EA5X5Y0 456 aa14.08□□□□□ -0.15
KARS-201ENST00000302445 TRPC5OSA6NMA1 111 aa14.08□□□□□ -0.15
KARS-201ENST00000302445 M0QYV0 167 aa14.08□□□□□ -0.15
KARS-201ENST00000302445 CFLARO15519 480 aa14.08□□□□□ -0.15
KARS-201ENST00000302445 GRID2O43424 1007 aa14.08□□□□□ -0.15
KARS-201ENST00000302445 ASNSP08243 561 aa14.08□□□□□ -0.15
KARS-201ENST00000302445 HOXC6P09630 235 aa14.08□□□□□ -0.15
KARS-201ENST00000302445 CYP2F1P24903 491 aa14.08□□□□□ -0.15
KARS-201ENST00000302445 HOXD12P35452 270 aa14.08□□□□□ -0.15
KARS-201ENST00000302445 SLC5A3P53794 718 aa14.08□□□□□ -0.15
KARS-201ENST00000302445 NME5P56597 212 aa14.08□□□□□ -0.15
KARS-201ENST00000302445 ACTR2P61160 394 aa14.08□□□□□ -0.15
KARS-201ENST00000302445 GRSF1Q12849 480 aaKnown RBP eCLIP14.08□□□□□ -0.15
KARS-201ENST00000302445 PPM1JQ5JR12 505 aa14.08□□□□□ -0.15
KARS-201ENST00000302445 ITPRIPL1Q6GPH6 555 aa14.08□□□□□ -0.15
KARS-201ENST00000302445 SCARA5Q6ZMJ2 495 aa14.08□□□□□ -0.15
KARS-201ENST00000302445 CCDC80Q76M96 950 aa14.08□□□□□ -0.15
KARS-201ENST00000302445 LYSMD3Q7Z3D4 306 aa14.08□□□□□ -0.15
KARS-201ENST00000302445 TMEM110Q86TL2 294 aa14.08□□□□□ -0.15
KARS-201ENST00000302445 USP13Q92995 863 aaPredicted RBP14.08□□□□□ -0.15
KARS-201ENST00000302445 OLFM1Q99784 485 aa14.08□□□□□ -0.15
KARS-201ENST00000302445 CORO1BQ9BR76 489 aa14.08□□□□□ -0.15
KARS-201ENST00000302445 SNRNP25Q9BV90 132 aaKnown RBP14.08□□□□□ -0.15
KARS-201ENST00000302445 MAF1Q9H063 256 aa14.08□□□□□ -0.15
KARS-201ENST00000302445 TRPV6Q9H1D0 765 aa14.08□□□□□ -0.15
KARS-201ENST00000302445 RPF2Q9H7B2 306 aaKnown RBP14.08□□□□□ -0.15
KARS-201ENST00000302445 KIAA1257Q9ULG3 409 aa14.08□□□□□ -0.15
KARS-201ENST00000302445 MAFBQ9Y5Q3 323 aaPredicted RBP14.08□□□□□ -0.15
KARS-201ENST00000302445 PSAT1Q9Y617 370 aa14.08□□□□□ -0.15
KARS-201ENST00000302445 PTPRFP10586 1907 aa14.08□□□□□ -0.15
KARS-201ENST00000302445 CILPO75339 1184 aa14.08□□□□□ -0.16
KARS-201ENST00000302445 OATP04181 439 aa14.08□□□□□ -0.16
KARS-201ENST00000302445 EIF2S1P05198 315 aaKnown RBP14.08□□□□□ -0.16
KARS-201ENST00000302445 EDN1P05305 212 aa14.08□□□□□ -0.16
KARS-201ENST00000302445 TCF7P36402 384 aaPredicted RBP14.08□□□□□ -0.16
KARS-201ENST00000302445 PSME3P61289 254 aa14.08□□□□□ -0.16
KARS-201ENST00000302445 ZBTB17Q13105 803 aa14.08□□□□□ -0.16
KARS-201ENST00000302445 TRNP1Q6NT89 227 aa14.08□□□□□ -0.16
KARS-201ENST00000302445 GADL1Q6ZQY3 521 aa14.08□□□□□ -0.16
KARS-201ENST00000302445 LRTOMTQ8WZ04 291 aa14.08□□□□□ -0.16
KARS-201ENST00000302445 TMEM143Q96AN5 459 aa14.08□□□□□ -0.16
KARS-201ENST00000302445 TMEM176AQ96HP8 235 aa14.08□□□□□ -0.16
KARS-201ENST00000302445 TCF12Q99081 682 aa14.08□□□□□ -0.16
KARS-201ENST00000302445 UNKQ9C0B0 810 aaKnown RBP14.08□□□□□ -0.16
KARS-201ENST00000302445 PAIP1Q9H074 479 aaKnown RBP14.08□□□□□ -0.16
KARS-201ENST00000302445 PCDHGA7Q9Y5G6 932 aa14.08□□□□□ -0.16
KARS-201ENST00000302445 A0A096LPK6 155 aa14.07□□□□□ -0.16
KARS-201ENST00000302445 H3BMQ9 156 aa14.07□□□□□ -0.16
KARS-201ENST00000302445 AKAP10O43572 662 aa14.07□□□□□ -0.16
KARS-201ENST00000302445 STAMBPO95630 424 aa14.07□□□□□ -0.16
KARS-201ENST00000302445 NR3C2P08235 984 aa14.07□□□□□ -0.16
KARS-201ENST00000302445 TFEBP19484 476 aa14.07□□□□□ -0.16
KARS-201ENST00000302445 CDH3P22223 829 aa14.07□□□□□ -0.16
KARS-201ENST00000302445 MPSTP25325 297 aa14.07□□□□□ -0.16
KARS-201ENST00000302445 TNFSF9P41273 254 aa14.07□□□□□ -0.16
KARS-201ENST00000302445 GRIA1P42261 906 aa14.07□□□□□ -0.16
KARS-201ENST00000302445 CSRP3P50461 194 aa14.07□□□□□ -0.16
KARS-201ENST00000302445 SCARA3Q6AZY7 606 aa14.07□□□□□ -0.16
KARS-201ENST00000302445 ZBTB49Q6ZSB9 765 aa14.07□□□□□ -0.16
KARS-201ENST00000302445 CAMK1DQ8IU85 385 aa14.07□□□□□ -0.16
KARS-201ENST00000302445 HERC6Q8IVU3 1022 aa14.07□□□□□ -0.16
KARS-201ENST00000302445 MYO1HQ8N1T3 1032 aa14.07□□□□□ -0.16
KARS-201ENST00000302445 CENPSQ8N2Z9 138 aa14.07□□□□□ -0.16
KARS-201ENST00000302445 SCAIQ8N9R8 606 aa14.07□□□□□ -0.16
KARS-201ENST00000302445 FAM47BQ8NA70 645 aa14.07□□□□□ -0.16
KARS-201ENST00000302445 HTR3CQ8WXA8 447 aa14.07□□□□□ -0.16
KARS-201ENST00000302445 NGLY1Q96IV0 654 aa14.07□□□□□ -0.16
KARS-201ENST00000302445 COG8Q96MW5 612 aa14.07□□□□□ -0.16
KARS-201ENST00000302445 NEURL2Q9BR09 285 aa14.07□□□□□ -0.16
KARS-201ENST00000302445 GPATCH1Q9BRR8 931 aaKnown RBP14.07□□□□□ -0.16
KARS-201ENST00000302445 NPLQ9BXD5 320 aaPredicted RBP14.07□□□□□ -0.16
KARS-201ENST00000302445 FTHL17Q9BXU8 183 aa14.07□□□□□ -0.16
KARS-201ENST00000302445 UPF3AQ9H1J1 476 aaKnown RBP14.07□□□□□ -0.16
KARS-201ENST00000302445 WDR55Q9H6Y2 383 aaPredicted RBP14.07□□□□□ -0.16
KARS-201ENST00000302445 SEPT3Q9UH03 358 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms