RNA–Protein interactions for RNA: ENST00000274901.8

HMGCLL1-201, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-201ENST00000274901 PTPN9P43378 593 aa9.36□□□□□ -0.91
HMGCLL1-201ENST00000274901 NKX2-5P52952 324 aaPredicted RBP9.36□□□□□ -0.91
HMGCLL1-201ENST00000274901 SNRPFP62306 86 aaKnown RBP9.36□□□□□ -0.91
HMGCLL1-201ENST00000274901 CBLBQ13191 982 aa9.36□□□□□ -0.91
HMGCLL1-201ENST00000274901 PTPN20Q4JDL3 420 aa9.36□□□□□ -0.91
HMGCLL1-201ENST00000274901 FAM209AQ5JX71 171 aa9.36□□□□□ -0.91
HMGCLL1-201ENST00000274901 GPAT2Q6NUI2 795 aa9.36□□□□□ -0.91
HMGCLL1-201ENST00000274901 FAM117BQ6P1L5 589 aa9.36□□□□□ -0.91
HMGCLL1-201ENST00000274901 KCTD8Q6ZWB6 473 aa9.36□□□□□ -0.91
HMGCLL1-201ENST00000274901 THNSL1Q8IYQ7 743 aa9.36□□□□□ -0.91
HMGCLL1-201ENST00000274901 OFCC1Q8IZS5 231 aa9.36□□□□□ -0.91
HMGCLL1-201ENST00000274901 OR5B17Q8NGF7 314 aa9.36□□□□□ -0.91
HMGCLL1-201ENST00000274901 RP9Q8TA86 221 aaKnown RBP9.36□□□□□ -0.91
HMGCLL1-201ENST00000274901 ZNF420Q8TAQ5 688 aaPredicted RBP9.36□□□□□ -0.91
HMGCLL1-201ENST00000274901 ATP6V0A1Q93050 837 aa9.36□□□□□ -0.91
HMGCLL1-201ENST00000274901 APBA2Q99767 749 aa9.36□□□□□ -0.91
HMGCLL1-201ENST00000274901 FRMD8P1Q9BZ68 369 aaPredicted RBP9.36□□□□□ -0.91
HMGCLL1-201ENST00000274901 HAPLN2Q9GZV7 340 aa9.36□□□□□ -0.91
HMGCLL1-201ENST00000274901 SOX17Q9H6I2 414 aaPredicted RBP9.36□□□□□ -0.91
HMGCLL1-201ENST00000274901 PALMDQ9NP74 551 aa9.36□□□□□ -0.91
HMGCLL1-201ENST00000274901 ADA2Q9NZK5 511 aa9.36□□□□□ -0.91
HMGCLL1-201ENST00000274901 CNTN6Q9UQ52 1028 aa9.36□□□□□ -0.91
HMGCLL1-201ENST00000274901 TMA7Q9Y2S6 64 aaKnown RBP9.36□□□□□ -0.91
HMGCLL1-201ENST00000274901 PCDHGA7Q9Y5G6 932 aa9.36□□□□□ -0.91
HMGCLL1-201ENST00000274901 PTPRFP10586 1907 aa9.35□□□□□ -0.91
HMGCLL1-201ENST00000274901 WDR27A2RRH5 827 aa9.35□□□□□ -0.91
HMGCLL1-201ENST00000274901 G3V2L1 256 aa9.35□□□□□ -0.91
HMGCLL1-201ENST00000274901 HNRNPDLO14979 420 aaKnown RBP9.35□□□□□ -0.91
HMGCLL1-201ENST00000274901 SNAP91O60641 907 aa9.35□□□□□ -0.91
HMGCLL1-201ENST00000274901 HDCP19113 662 aa9.35□□□□□ -0.91
HMGCLL1-201ENST00000274901 FKBP1AP62942 108 aaKnown RBP9.35□□□□□ -0.91
HMGCLL1-201ENST00000274901 IRF9Q00978 393 aa9.35□□□□□ -0.91
HMGCLL1-201ENST00000274901 SEPT6Q14141 434 aa9.35□□□□□ -0.91
HMGCLL1-201ENST00000274901 PTK2BQ14289 1009 aa9.35□□□□□ -0.91
HMGCLL1-201ENST00000274901 INAVAQ3KP66 663 aa9.35□□□□□ -0.91
HMGCLL1-201ENST00000274901 TIGD2Q4W5G0 525 aa9.35□□□□□ -0.91
HMGCLL1-201ENST00000274901 FAM47CQ5HY64 1035 aa9.35□□□□□ -0.91
HMGCLL1-201ENST00000274901 ZBTB49Q6ZSB9 765 aa9.35□□□□□ -0.91
HMGCLL1-201ENST00000274901 CYP4V2Q6ZWL3 525 aaPredicted RBP9.35□□□□□ -0.91
HMGCLL1-201ENST00000274901 HACE1Q8IYU2 909 aa9.35□□□□□ -0.91
HMGCLL1-201ENST00000274901 CBR4Q8N4T8 237 aa9.35□□□□□ -0.91
HMGCLL1-201ENST00000274901 SLC16A10Q8TF71 515 aa9.35□□□□□ -0.91
HMGCLL1-201ENST00000274901 SLC7A3Q8WY07 619 aa9.35□□□□□ -0.91
HMGCLL1-201ENST00000274901 MROQ9BYG7 248 aa9.35□□□□□ -0.91
HMGCLL1-201ENST00000274901 KLHL25Q9H0H3 589 aa9.35□□□□□ -0.91
HMGCLL1-201ENST00000274901 PI4KBQ9UBF8 816 aa9.35□□□□□ -0.91
HMGCLL1-201ENST00000274901 KLQ9UEF7 1012 aa9.35□□□□□ -0.91
HMGCLL1-201ENST00000274901 KLHL3Q9UH77 587 aa9.35□□□□□ -0.91
HMGCLL1-201ENST00000274901 TRAF6Q9Y4K3 522 aa9.35□□□□□ -0.91
HMGCLL1-201ENST00000274901 PCDHA11Q9Y5I1 949 aa9.35□□□□□ -0.91
HMGCLL1-201ENST00000274901 ANKRD34BA5PLL1 514 aa9.34□□□□□ -0.91
HMGCLL1-201ENST00000274901 FAM149AA5PLN7 773 aa9.34□□□□□ -0.91
HMGCLL1-201ENST00000274901 PRORSD1PA6NEY8 169 aa9.34□□□□□ -0.91
HMGCLL1-201ENST00000274901 ZNF839A8K0R7 811 aa9.34□□□□□ -0.91
HMGCLL1-201ENST00000274901 KCNU1A8MYU2 1149 aa9.34□□□□□ -0.91
HMGCLL1-201ENST00000274901 TRIM38O00635 465 aa9.34□□□□□ -0.91
HMGCLL1-201ENST00000274901 AXIN1O15169 862 aa9.34□□□□□ -0.91
HMGCLL1-201ENST00000274901 GRID2O43424 1007 aa9.34□□□□□ -0.91
HMGCLL1-201ENST00000274901 B4GAT1O43505 415 aa9.34□□□□□ -0.91
HMGCLL1-201ENST00000274901 STAM2O75886 525 aa9.34□□□□□ -0.91
HMGCLL1-201ENST00000274901 RSL1D1O76021 490 aaKnown RBP9.34□□□□□ -0.91
HMGCLL1-201ENST00000274901 MYF6P23409 242 aa9.34□□□□□ -0.91
HMGCLL1-201ENST00000274901 MZF1P28698 734 aaPredicted RBP9.34□□□□□ -0.91
HMGCLL1-201ENST00000274901 GNL1P36915 607 aaPredicted RBP9.34□□□□□ -0.91
HMGCLL1-201ENST00000274901 HPCAL1P37235 193 aa9.34□□□□□ -0.91
HMGCLL1-201ENST00000274901 ABCG1P45844 678 aa9.34□□□□□ -0.91
HMGCLL1-201ENST00000274901 SERPINB9P50453 376 aa9.34□□□□□ -0.91
HMGCLL1-201ENST00000274901 PGGT1BP53609 377 aa9.34□□□□□ -0.91
HMGCLL1-201ENST00000274901 CLDN10P78369 228 aa9.34□□□□□ -0.91
HMGCLL1-201ENST00000274901 RHDQ02161 417 aa9.34□□□□□ -0.91
HMGCLL1-201ENST00000274901 NIPAL4Q0D2K0 466 aa9.34□□□□□ -0.91
HMGCLL1-201ENST00000274901 ART3Q13508 389 aa9.34□□□□□ -0.91
HMGCLL1-201ENST00000274901 DNASE1L3Q13609 305 aa9.34□□□□□ -0.91
HMGCLL1-201ENST00000274901 INAQ16352 499 aa9.34□□□□□ -0.91
HMGCLL1-201ENST00000274901 PGS1Q32NB8 556 aa9.34□□□□□ -0.91
HMGCLL1-201ENST00000274901 ARL13BQ3SXY8 428 aa9.34□□□□□ -0.91
HMGCLL1-201ENST00000274901 C6orf10Q5SRN2 563 aa9.34□□□□□ -0.91
HMGCLL1-201ENST00000274901 DENND1BQ6P3S1 775 aa9.34□□□□□ -0.91
HMGCLL1-201ENST00000274901 GK5Q6ZS86 529 aa9.34□□□□□ -0.91
HMGCLL1-201ENST00000274901 PIWIL3Q7Z3Z3 882 aaKnown RBP9.34□□□□□ -0.91
HMGCLL1-201ENST00000274901 SNX31Q8N9S9 440 aa9.34□□□□□ -0.91
HMGCLL1-201ENST00000274901 CMASQ8NFW8 434 aaPredicted RBP9.34□□□□□ -0.91
HMGCLL1-201ENST00000274901 LPGAT1Q92604 370 aa9.34□□□□□ -0.91
HMGCLL1-201ENST00000274901 ASB9Q96DX5 294 aa9.34□□□□□ -0.91
HMGCLL1-201ENST00000274901 ANKRD36BP1Q96IX9 119 aa9.34□□□□□ -0.91
HMGCLL1-201ENST00000274901 ZNF641Q96N77 438 aaPredicted RBP9.34□□□□□ -0.91
HMGCLL1-201ENST00000274901 UHRF1Q96T88 793 aaPredicted RBP9.34□□□□□ -0.91
HMGCLL1-201ENST00000274901 PSD2Q9BQI7 771 aa9.34□□□□□ -0.91
HMGCLL1-201ENST00000274901 MRIQ9BWK5 157 aa9.34□□□□□ -0.91
HMGCLL1-201ENST00000274901 IDI2Q9BXS1 227 aa9.34□□□□□ -0.91
HMGCLL1-201ENST00000274901 FAM96AQ9H5X1 160 aa9.34□□□□□ -0.91
HMGCLL1-201ENST00000274901 PCDH12Q9NPG4 1184 aa9.34□□□□□ -0.91
HMGCLL1-201ENST00000274901 KCNH7Q9NS40 1196 aa9.34□□□□□ -0.91
HMGCLL1-201ENST00000274901 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.34□□□□□ -0.91
HMGCLL1-201ENST00000274901 PIM2Q9P1W9 311 aa9.34□□□□□ -0.91
HMGCLL1-201ENST00000274901 NYAP2Q9P242 653 aa9.34□□□□□ -0.91
HMGCLL1-201ENST00000274901 ERVK-11Q9UQG0 969 aa9.34□□□□□ -0.91
HMGCLL1-201ENST00000274901 CDY2AQ9Y6F7 541 aa9.34□□□□□ -0.91
HMGCLL1-201ENST00000274901 CDY1Q9Y6F8 540 aa9.34□□□□□ -0.91
HMGCLL1-201ENST00000274901 SLC30A1Q9Y6M5 507 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms