RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 ERVW-1Q9UQF0 538 aa18.77■□□□□ 0.6
SDF4-201ENST00000263741 RASA4BC9J798 803 aa18.77■□□□□ 0.59
SDF4-201ENST00000263741 RASA4O43374 803 aa18.77■□□□□ 0.59
SDF4-201ENST00000263741 MT-CO1P00395 513 aa18.77■□□□□ 0.59
SDF4-201ENST00000263741 CTNNA1P35221 906 aaKnown RBP18.77■□□□□ 0.59
SDF4-201ENST00000263741 HCAR3P49019 387 aa18.77■□□□□ 0.59
SDF4-201ENST00000263741 PLK1P53350 603 aa18.77■□□□□ 0.59
SDF4-201ENST00000263741 ECT2LQ008S8 904 aa18.77■□□□□ 0.59
SDF4-201ENST00000263741 SLC12A1Q13621 1099 aa18.77■□□□□ 0.59
SDF4-201ENST00000263741 PDK2Q15119 407 aa18.77■□□□□ 0.59
SDF4-201ENST00000263741 TMEM92Q6UXU6 159 aa18.77■□□□□ 0.59
SDF4-201ENST00000263741 ARHGAP12Q8IWW6 846 aa18.77■□□□□ 0.59
SDF4-201ENST00000263741 RNF10Q8N5U6 811 aaKnown RBP18.77■□□□□ 0.59
SDF4-201ENST00000263741 DCAF4L2Q8NA75 395 aa18.77■□□□□ 0.59
SDF4-201ENST00000263741 ALG3Q92685 438 aa18.77■□□□□ 0.59
SDF4-201ENST00000263741 HHIPQ96QV1 700 aa18.77■□□□□ 0.59
SDF4-201ENST00000263741 SLC39A8Q9C0K1 460 aa18.77■□□□□ 0.59
SDF4-201ENST00000263741 MMP17Q9ULZ9 603 aa18.77■□□□□ 0.59
SDF4-201ENST00000263741 K7ERQ8 282 aa18.76■□□□□ 0.59
SDF4-201ENST00000263741 ZSCAN12O43309 604 aa18.76■□□□□ 0.59
SDF4-201ENST00000263741 MFSD11O43934 449 aa18.76■□□□□ 0.59
SDF4-201ENST00000263741 ATP5BP06576 529 aaKnown RBP18.76■□□□□ 0.59
SDF4-201ENST00000263741 HOXB2P14652 356 aa18.76■□□□□ 0.59
SDF4-201ENST00000263741 VAV1P15498 845 aa18.76■□□□□ 0.59
SDF4-201ENST00000263741 NTSR1P30989 418 aa18.76■□□□□ 0.59
SDF4-201ENST00000263741 OXCT1P55809 520 aa18.76■□□□□ 0.59
SDF4-201ENST00000263741 ARF5P84085 180 aa18.76■□□□□ 0.59
SDF4-201ENST00000263741 DMC1Q14565 340 aa18.76■□□□□ 0.59
SDF4-201ENST00000263741 ODF2Q5BJF6 829 aa18.76■□□□□ 0.59
SDF4-201ENST00000263741 NCBP2-AS2Q69YL0 99 aa18.76■□□□□ 0.59
SDF4-201ENST00000263741 KIAA1211LQ6NV74 962 aa18.76■□□□□ 0.59
SDF4-201ENST00000263741 AADACL2Q6P093 401 aa18.76■□□□□ 0.59
SDF4-201ENST00000263741 TMCO3Q6UWJ1 677 aa18.76■□□□□ 0.59
SDF4-201ENST00000263741 ARHGAP36Q6ZRI8 547 aa18.76■□□□□ 0.59
SDF4-201ENST00000263741 ZNF662Q6ZS27 426 aa18.76■□□□□ 0.59
SDF4-201ENST00000263741 CCDC50Q8IVM0 306 aa18.76■□□□□ 0.59
SDF4-201ENST00000263741 UMODL1-AS1Q8N2C9 162 aa18.76■□□□□ 0.59
SDF4-201ENST00000263741 SPEM1Q8N4L4 309 aa18.76■□□□□ 0.59
SDF4-201ENST00000263741 PQLC3Q8N755 202 aa18.76■□□□□ 0.59
SDF4-201ENST00000263741 CALR3Q96L12 384 aaKnown RBP18.76■□□□□ 0.59
SDF4-201ENST00000263741 LRRC19Q9H756 370 aa18.76■□□□□ 0.59
SDF4-201ENST00000263741 DDX56Q9NY93 547 aaKnown RBP18.76■□□□□ 0.59
SDF4-201ENST00000263741 AMFRQ9UKV5 643 aa18.76■□□□□ 0.59
SDF4-201ENST00000263741 VPS13AQ96RL7 3174 aa18.76■□□□□ 0.59
SDF4-201ENST00000263741 MUC6Q6W4X9 2439 aa18.75■□□□□ 0.59
SDF4-201ENST00000263741 ANKRD36A6QL64 1941 aa18.75■□□□□ 0.59
SDF4-201ENST00000263741 CHURC1-FNTBB4DL54 471 aa18.75■□□□□ 0.59
SDF4-201ENST00000263741 DFFAO00273 331 aa18.75■□□□□ 0.59
SDF4-201ENST00000263741 KRT10P13645 584 aa18.75■□□□□ 0.59
SDF4-201ENST00000263741 ZNF135P52742 658 aaPredicted RBP18.75■□□□□ 0.59
SDF4-201ENST00000263741 DYNLT1P63172 113 aa18.75■□□□□ 0.59
SDF4-201ENST00000263741 DMTNQ08495 405 aa18.75■□□□□ 0.59
SDF4-201ENST00000263741 CACUL1Q86Y37 369 aa18.75■□□□□ 0.59
SDF4-201ENST00000263741 MAP7D3Q8IWC1 876 aa18.75■□□□□ 0.59
SDF4-201ENST00000263741 KATNAL2Q8IYT4 538 aa18.75■□□□□ 0.59
SDF4-201ENST00000263741 LRRN4Q8WUT4 740 aa18.75■□□□□ 0.59
SDF4-201ENST00000263741 FAF2Q96CS3 445 aa18.75■□□□□ 0.59
SDF4-201ENST00000263741 C2orf49Q9BVC5 232 aaPredicted RBP18.75■□□□□ 0.59
SDF4-201ENST00000263741 L2HGDHQ9H9P8 463 aa18.75■□□□□ 0.59
SDF4-201ENST00000263741 RCOR3Q9P2K3 495 aaPredicted RBP18.75■□□□□ 0.59
SDF4-201ENST00000263741 PLA2G4CQ9UP65 541 aa18.75■□□□□ 0.59
SDF4-201ENST00000263741 GOLGA6L9A6NEM1 432 aa18.75■□□□□ 0.59
SDF4-201ENST00000263741 TTC34A8MYJ7 566 aa18.75■□□□□ 0.59
SDF4-201ENST00000263741 PXNP49023 591 aaPredicted RBP18.75■□□□□ 0.59
SDF4-201ENST00000263741 KAZNQ674X7 775 aa18.75■□□□□ 0.59
SDF4-201ENST00000263741 ZNF783Q6ZMS7 281 aa18.75■□□□□ 0.59
SDF4-201ENST00000263741 SYCE1Q8N0S2 351 aa18.75■□□□□ 0.59
SDF4-201ENST00000263741 ACDQ96AP0 544 aa18.75■□□□□ 0.59
SDF4-201ENST00000263741 ACE2Q9BYF1 805 aaPredicted RBP18.75■□□□□ 0.59
SDF4-201ENST00000263741 MAGEH1Q9H213 219 aa18.75■□□□□ 0.59
SDF4-201ENST00000263741 PCDHA3Q9Y5H8 950 aa18.75■□□□□ 0.59
SDF4-201ENST00000263741 TIMM44O43615 452 aa18.74■□□□□ 0.59
SDF4-201ENST00000263741 ZMPSTE24O75844 475 aa18.74■□□□□ 0.59
SDF4-201ENST00000263741 EPHX1P07099 455 aa18.74■□□□□ 0.59
SDF4-201ENST00000263741 CTNNA2P26232 953 aa18.74■□□□□ 0.59
SDF4-201ENST00000263741 CDKN2BP42772 138 aa18.74■□□□□ 0.59
SDF4-201ENST00000263741 MAGEA9P43362 315 aa18.74■□□□□ 0.59
SDF4-201ENST00000263741 ZNF211Q13398 564 aaPredicted RBP18.74■□□□□ 0.59
SDF4-201ENST00000263741 SPOCD1Q6ZMY3 1216 aa18.74■□□□□ 0.59
SDF4-201ENST00000263741 SYT13Q7L8C5 426 aa18.74■□□□□ 0.59
SDF4-201ENST00000263741 RFX6Q8HWS3 928 aa18.74■□□□□ 0.59
SDF4-201ENST00000263741 C1orf210Q8IVY1 113 aa18.74■□□□□ 0.59
SDF4-201ENST00000263741 MAML2Q8IZL2 1156 aaPredicted RBP18.74■□□□□ 0.59
SDF4-201ENST00000263741 RNF157Q96PX1 679 aa18.74■□□□□ 0.59
SDF4-201ENST00000263741 SLC6A17Q9H1V8 727 aa18.74■□□□□ 0.59
SDF4-201ENST00000263741 TMEM245Q9H330 911 aa18.74■□□□□ 0.59
SDF4-201ENST00000263741 SLC25A13Q9UJS0 675 aa18.74■□□□□ 0.59
SDF4-201ENST00000263741 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.74■□□□□ 0.59
SDF4-201ENST00000263741 A0A1W2PQF6 199 aa18.73■□□□□ 0.59
SDF4-201ENST00000263741 SMAD6O43541 496 aaKnown RBP18.73■□□□□ 0.59
SDF4-201ENST00000263741 ASLP04424 464 aa18.73■□□□□ 0.59
SDF4-201ENST00000263741 PEX5P50542 639 aa18.73■□□□□ 0.59
SDF4-201ENST00000263741 PAPOLAP51003 745 aaKnown RBP18.73■□□□□ 0.59
SDF4-201ENST00000263741 GBE1Q04446 702 aa18.73■□□□□ 0.59
SDF4-201ENST00000263741 ADCY2Q08462 1091 aa18.73■□□□□ 0.59
SDF4-201ENST00000263741 CRY1Q16526 586 aa18.73■□□□□ 0.59
SDF4-201ENST00000263741 EOGTQ5NDL2 527 aa18.73■□□□□ 0.59
SDF4-201ENST00000263741 AFMIDQ63HM1 303 aa18.73■□□□□ 0.59
SDF4-201ENST00000263741 SYT10Q6XYQ8 523 aa18.73■□□□□ 0.59
SDF4-201ENST00000263741 HERPUD2Q9BSE4 406 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms