RNA–Protein interactions for RNA: ENST00000258387.5

PAX3-201, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-201ENST00000258387 MT-CO1P00395 513 aa19.21■□□□□ 0.67
PAX3-201ENST00000258387 EPHA8P29322 1005 aaPredicted RBP19.21■□□□□ 0.67
PAX3-201ENST00000258387 CLCN1P35523 988 aa19.21■□□□□ 0.67
PAX3-201ENST00000258387 STAT4Q14765 748 aa19.21■□□□□ 0.67
PAX3-201ENST00000258387 PTPN20Q4JDL3 420 aa19.21■□□□□ 0.67
PAX3-201ENST00000258387 TMPRSS12Q86WS5 348 aa19.21■□□□□ 0.67
PAX3-201ENST00000258387 TKTL2Q9H0I9 626 aa19.21■□□□□ 0.67
PAX3-201ENST00000258387 PDCL3Q9H2J4 239 aa19.21■□□□□ 0.67
PAX3-201ENST00000258387 KDM4CQ9H3R0 1056 aa19.21■□□□□ 0.67
PAX3-201ENST00000258387 WDCPQ9H6R7 721 aa19.21■□□□□ 0.67
PAX3-201ENST00000258387 SIX2Q9NPC8 291 aa19.21■□□□□ 0.67
PAX3-201ENST00000258387 CA5BQ9Y2D0 317 aa19.21■□□□□ 0.67
PAX3-201ENST00000258387 GTPBP10A4D1E9 387 aaKnown RBP19.2■□□□□ 0.66
PAX3-201ENST00000258387 K7ERQ8 282 aa19.2■□□□□ 0.66
PAX3-201ENST00000258387 YKT6O15498 198 aa19.2■□□□□ 0.66
PAX3-201ENST00000258387 SLC7A4O43246 635 aa19.2■□□□□ 0.66
PAX3-201ENST00000258387 SNAP91O60641 907 aa19.2■□□□□ 0.66
PAX3-201ENST00000258387 TFE3P19532 575 aaPredicted RBP19.2■□□□□ 0.66
PAX3-201ENST00000258387 VASPP50552 380 aaPredicted RBP19.2■□□□□ 0.66
PAX3-201ENST00000258387 CDH4P55283 916 aa19.2■□□□□ 0.66
PAX3-201ENST00000258387 MTA1Q13330 715 aa19.2■□□□□ 0.66
PAX3-201ENST00000258387 AGBL4Q5VU57 503 aa19.2■□□□□ 0.66
PAX3-201ENST00000258387 SLC26A9Q7LBE3 791 aa19.2■□□□□ 0.66
PAX3-201ENST00000258387 SH2D3CQ8N5H7 860 aa19.2■□□□□ 0.66
PAX3-201ENST00000258387 ATP11CQ8NB49 1132 aa19.2■□□□□ 0.66
PAX3-201ENST00000258387 KLK6Q92876 244 aa19.2■□□□□ 0.66
PAX3-201ENST00000258387 ERVMER34-1Q9H9K5 563 aa19.2■□□□□ 0.66
PAX3-201ENST00000258387 ANLNQ9NQW6 1124 aa19.2■□□□□ 0.66
PAX3-201ENST00000258387 PIGVQ9NUD9 493 aa19.2■□□□□ 0.66
PAX3-201ENST00000258387 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.2■□□□□ 0.66
PAX3-201ENST00000258387 DKK4Q9UBT3 224 aa19.2■□□□□ 0.66
PAX3-201ENST00000258387 TBC1D30Q9Y2I9 924 aa19.2■□□□□ 0.66
PAX3-201ENST00000258387 PCDHGA1Q9Y5H4 931 aa19.2■□□□□ 0.66
PAX3-201ENST00000258387 PTPRBP23467 1997 aa19.2■□□□□ 0.66
PAX3-201ENST00000258387 APC2O95996 2303 aa19.2■□□□□ 0.66
PAX3-201ENST00000258387 RFPL3O75679 317 aa19.19■□□□□ 0.66
PAX3-201ENST00000258387 RHOCP08134 193 aa19.19■□□□□ 0.66
PAX3-201ENST00000258387 RXRGP48443 463 aa19.19■□□□□ 0.66
PAX3-201ENST00000258387 SULT1E1P49888 294 aa19.19■□□□□ 0.66
PAX3-201ENST00000258387 KRT83P78385 493 aa19.19■□□□□ 0.66
PAX3-201ENST00000258387 ALFQ53S48 1182 aa19.19■□□□□ 0.66
PAX3-201ENST00000258387 OTUD1Q5VV17 481 aaPredicted RBP19.19■□□□□ 0.66
PAX3-201ENST00000258387 FAM131CQ96AQ9 280 aa19.19■□□□□ 0.66
PAX3-201ENST00000258387 NPY6RQ99463 290 aa19.19■□□□□ 0.66
PAX3-201ENST00000258387 MYOCQ99972 504 aa19.19■□□□□ 0.66
PAX3-201ENST00000258387 DMTF1Q9Y222 760 aa19.19■□□□□ 0.66
PAX3-201ENST00000258387 FARP1Q9Y4F1 1045 aaPredicted RBP19.19■□□□□ 0.66
PAX3-201ENST00000258387 PLXNA2O75051 1894 aa19.19■□□□□ 0.66
PAX3-201ENST00000258387 ACACAQ13085 2346 aa19.19■□□□□ 0.66
PAX3-201ENST00000258387 ALOX15BO15296 676 aa19.18■□□□□ 0.66
PAX3-201ENST00000258387 SLC31A1O15431 190 aa19.18■□□□□ 0.66
PAX3-201ENST00000258387 RNGTTO60942 597 aaKnown RBP19.18■□□□□ 0.66
PAX3-201ENST00000258387 SDC3O75056 442 aa19.18■□□□□ 0.66
PAX3-201ENST00000258387 SRCP12931 536 aa19.18■□□□□ 0.66
PAX3-201ENST00000258387 PRLRP16471 622 aa19.18■□□□□ 0.66
PAX3-201ENST00000258387 CXCR3P49682 368 aa19.18■□□□□ 0.66
PAX3-201ENST00000258387 ACADVLP49748 655 aa19.18■□□□□ 0.66
PAX3-201ENST00000258387 DEUP1Q05D60 604 aa19.18■□□□□ 0.66
PAX3-201ENST00000258387 TARDBPQ13148 414 aaKnown RBP eCLIP19.18■□□□□ 0.66
PAX3-201ENST00000258387 C5orf22Q49AR2 442 aa19.18■□□□□ 0.66
PAX3-201ENST00000258387 SETMARQ53H47 684 aaPredicted RBP19.18■□□□□ 0.66
PAX3-201ENST00000258387 HSP90AA4PQ58FG1 418 aa19.18■□□□□ 0.66
PAX3-201ENST00000258387 TRIM69Q86WT6 500 aa19.18■□□□□ 0.66
PAX3-201ENST00000258387 OXR1Q8N573 874 aa19.18■□□□□ 0.66
PAX3-201ENST00000258387 MLKLQ8NB16 471 aa19.18■□□□□ 0.66
PAX3-201ENST00000258387 ZNF397Q8NF99 534 aaPredicted RBP19.18■□□□□ 0.66
PAX3-201ENST00000258387 KLHDC7BQ96G42 594 aa19.18■□□□□ 0.66
PAX3-201ENST00000258387 DCBLD2Q96PD2 775 aa19.18■□□□□ 0.66
PAX3-201ENST00000258387 PSMB7Q99436 277 aa19.18■□□□□ 0.66
PAX3-201ENST00000258387 TMPRSS4Q9NRS4 437 aa19.18■□□□□ 0.66
PAX3-201ENST00000258387 ARHGEF38Q9NXL2 777 aa19.18■□□□□ 0.66
PAX3-201ENST00000258387 URB1O60287 2271 aaKnown RBP19.18■□□□□ 0.66
PAX3-201ENST00000258387 ITPR1Q14643 2758 aa19.18■□□□□ 0.66
PAX3-201ENST00000258387 A0A0D9SEW6 157 aa19.17■□□□□ 0.66
PAX3-201ENST00000258387 PRAMEF26H0Y7S4 382 aa19.17■□□□□ 0.66
PAX3-201ENST00000258387 I6L893 689 aaPredicted RBP19.17■□□□□ 0.66
PAX3-201ENST00000258387 KPNA3O00505 521 aaPredicted RBP19.17■□□□□ 0.66
PAX3-201ENST00000258387 SMAD6O43541 496 aaKnown RBP19.17■□□□□ 0.66
PAX3-201ENST00000258387 MAGEC1O60732 1142 aa19.17■□□□□ 0.66
PAX3-201ENST00000258387 ENDOD1O94919 500 aa19.17■□□□□ 0.66
PAX3-201ENST00000258387 CTSLP07711 333 aa19.17■□□□□ 0.66
PAX3-201ENST00000258387 C1SP09871 688 aa19.17■□□□□ 0.66
PAX3-201ENST00000258387 PRKCSHP14314 528 aaPredicted RBP19.17■□□□□ 0.66
PAX3-201ENST00000258387 RRM1P23921 792 aa19.17■□□□□ 0.66
PAX3-201ENST00000258387 CHRNA3P32297 505 aa19.17■□□□□ 0.66
PAX3-201ENST00000258387 HNF1BP35680 557 aa19.17■□□□□ 0.66
PAX3-201ENST00000258387 NUDT1P36639 197 aa19.17■□□□□ 0.66
PAX3-201ENST00000258387 TAS2R38P59533 333 aa19.17■□□□□ 0.66
PAX3-201ENST00000258387 BPIFB4P59827 614 aa19.17■□□□□ 0.66
PAX3-201ENST00000258387 UBE2HP62256 183 aa19.17■□□□□ 0.66
PAX3-201ENST00000258387 RAPGEF1Q13905 1077 aa19.17■□□□□ 0.66
PAX3-201ENST00000258387 DRAP1Q14919 205 aaPredicted RBP19.17■□□□□ 0.66
PAX3-201ENST00000258387 MAN2A1Q16706 1144 aa19.17■□□□□ 0.66
PAX3-201ENST00000258387 SOWAHCQ53LP3 525 aaPredicted RBP19.17■□□□□ 0.66
PAX3-201ENST00000258387 TAF3Q5VWG9 929 aa19.17■□□□□ 0.66
PAX3-201ENST00000258387 LRRC31Q6UY01 552 aa19.17■□□□□ 0.66
PAX3-201ENST00000258387 LINGO4Q6UY18 593 aa19.17■□□□□ 0.66
PAX3-201ENST00000258387 TFAP2DQ7Z6R9 452 aa19.17■□□□□ 0.66
PAX3-201ENST00000258387 IQCHQ86VS3 1027 aa19.17■□□□□ 0.66
PAX3-201ENST00000258387 ZDHHC17Q8IUH5 632 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms