RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 NAF1Q96HR8 494 aaKnown RBP9.38□□□□□ -0.91
RPA1-201ENST00000254719 NSL1Q96IY1 281 aa9.38□□□□□ -0.91
RPA1-201ENST00000254719 SIKE1Q9BRV8 207 aa9.38□□□□□ -0.91
RPA1-201ENST00000254719 TBC1D30Q9Y2I9 924 aa9.38□□□□□ -0.91
RPA1-201ENST00000254719 GLTPD2A6NH11 291 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 GJB3O75712 270 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 CHEK2O96017 543 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 F9P00740 461 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 POLBP06746 335 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 BST1Q10588 318 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 DGKDQ16760 1214 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 NLRP9Q7RTR0 991 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 RTN4RL1Q86UN2 441 aaPredicted RBP9.37□□□□□ -0.91
RPA1-201ENST00000254719 ZNF410Q86VK4 478 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 CRIPAKQ8N1N5 446 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 STKLD1Q8NE28 680 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 ADAM32Q8TC27 787 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 CLPTM1LQ96KA5 538 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 CENPKQ9BS16 269 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 RRN3Q9NYV6 651 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 SMIM35A0A1B0GVV1 85 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 GSC2O15499 205 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 TGDSO95455 350 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 S100BP04271 92 aaPredicted RBP9.37□□□□□ -0.91
RPA1-201ENST00000254719 TPSB2P20231 275 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 DNAJB2P25686 324 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 PGM1P36871 562 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 IRF9Q00978 393 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 NAB1Q13506 487 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 TPSAB1Q15661 275 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 DLG2Q15700 870 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 C16orf46Q6P387 395 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 CES3Q6UWW8 571 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 C4orf50Q6ZRC1 276 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 TMEM135Q86UB9 458 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 E2F7Q96AV8 911 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 PARK7Q99497 189 aaKnown RBP9.37□□□□□ -0.91
RPA1-201ENST00000254719 HNRNPABQ99729 332 aaKnown RBP9.37□□□□□ -0.91
RPA1-201ENST00000254719 SH3GL3Q99963 347 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 RHBDL2Q9NX52 303 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 CDY2AQ9Y6F7 541 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 CDY1Q9Y6F8 540 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 BUD23O43709 281 aaKnown RBP9.37□□□□□ -0.91
RPA1-201ENST00000254719 DPP6P42658 865 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 MATKP42679 507 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 TAF6P49848 677 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 CLCNKBP51801 687 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 BCAT1P54687 386 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 TPI1P60174 286 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 AP1B1Q10567 949 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 RBBP5Q15291 538 aaKnown RBP9.37□□□□□ -0.91
RPA1-201ENST00000254719 ANO4Q32M45 955 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 SLC25A52Q3SY17 297 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 C1orf146Q5VVC0 180 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 AFMIDQ63HM1 303 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 ANKRD23Q86SG2 305 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 RASSF3Q86WH2 238 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 FAM131BQ86XD5 332 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 LSMEM2Q8N112 164 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 OR10T2Q8NGX3 314 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 CMTM5Q96DZ9 223 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 BRD8Q9H0E9 1235 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.37□□□□□ -0.91
RPA1-201ENST00000254719 RPL26L1Q9UNX3 145 aaKnown RBP9.37□□□□□ -0.91
RPA1-201ENST00000254719 MRPL42Q9Y6G3 142 aaKnown RBP9.37□□□□□ -0.91
RPA1-201ENST00000254719 WDR27A2RRH5 827 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 TRDMT1O14717 391 aaKnown RBP9.37□□□□□ -0.91
RPA1-201ENST00000254719 NCAM2O15394 837 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 ZBTB14O43829 449 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 GLRA3O75311 464 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 FBXO21O94952 628 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 APOEP02649 317 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 WARSP23381 471 aaKnown RBP9.37□□□□□ -0.91
RPA1-201ENST00000254719 SCNN1AP37088 669 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 NR2C2P49116 596 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 GLUD2P49448 558 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 MBTPS1Q14703 1052 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 LINC00523Q86TU6 105 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 DEFB106AQ8N104 65 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 MAB21L3Q8N8X9 362 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 HDAC11Q96DB2 347 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 PGAP3Q96FM1 320 aaPredicted RBP9.37□□□□□ -0.91
RPA1-201ENST00000254719 TSPAN18Q96SJ8 248 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 UBE2OQ9C0C9 1292 aaKnown RBP9.37□□□□□ -0.91
RPA1-201ENST00000254719 ARHGAP39Q9C0H5 1083 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 SYBUQ9NX95 663 aa9.37□□□□□ -0.91
RPA1-201ENST00000254719 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.37□□□□□ -0.91
RPA1-201ENST00000254719 WDFY4Q6ZS81 3184 aa9.36□□□□□ -0.91
RPA1-201ENST00000254719 A0A088AWK7 358 aa9.36□□□□□ -0.91
RPA1-201ENST00000254719 SPATA31D3P0C874 917 aa9.36□□□□□ -0.91
RPA1-201ENST00000254719 SAT1P21673 171 aa9.36□□□□□ -0.91
RPA1-201ENST00000254719 ADORA2BP29275 332 aa9.36□□□□□ -0.91
RPA1-201ENST00000254719 HADHAP40939 763 aa9.36□□□□□ -0.91
RPA1-201ENST00000254719 SULT1E1P49888 294 aa9.36□□□□□ -0.91
RPA1-201ENST00000254719 NKX3-2P78367 333 aa9.36□□□□□ -0.91
RPA1-201ENST00000254719 CDK16Q00536 496 aa9.36□□□□□ -0.91
RPA1-201ENST00000254719 SCAPQ12770 1279 aa9.36□□□□□ -0.91
RPA1-201ENST00000254719 SMAD1Q15797 465 aaKnown RBP9.36□□□□□ -0.91
RPA1-201ENST00000254719 TRIM71Q2Q1W2 868 aaKnown RBP9.36□□□□□ -0.91
RPA1-201ENST00000254719 SPRYD7Q5W111 196 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms