RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 SCYL1Q96KG9 808 aa9.1□□□□□ -0.95
MTHFD1-201ENST00000216605 NR1H4Q96RI1 486 aaPredicted RBP9.1□□□□□ -0.95
MTHFD1-201ENST00000216605 SLC9A7Q96T83 725 aa9.1□□□□□ -0.95
MTHFD1-201ENST00000216605 RNPEPL1Q9HAU8 725 aa9.1□□□□□ -0.95
MTHFD1-201ENST00000216605 CSNK1G1Q9HCP0 422 aa9.1□□□□□ -0.95
MTHFD1-201ENST00000216605 SF3B1O75533 1304 aaKnown RBP eCLIP9.1□□□□□ -0.952e-6■■■■■ 43.1
MTHFD1-201ENST00000216605 TDRD15B5MCY1 1934 aaKnown RBP9.1□□□□□ -0.95
MTHFD1-201ENST00000216605 A0A0A0MRY4 1105 aa9.1□□□□□ -0.95
MTHFD1-201ENST00000216605 HACD1B0YJ81 288 aa9.1□□□□□ -0.95
MTHFD1-201ENST00000216605 LRIG2O94898 1065 aa9.1□□□□□ -0.95
MTHFD1-201ENST00000216605 MT-ND3P03897 115 aa9.1□□□□□ -0.95
MTHFD1-201ENST00000216605 CCL5P13501 91 aa9.1□□□□□ -0.95
MTHFD1-201ENST00000216605 VAV1P15498 845 aa9.1□□□□□ -0.95
MTHFD1-201ENST00000216605 PSMB4P28070 264 aa9.1□□□□□ -0.95
MTHFD1-201ENST00000216605 CCR1P32246 355 aa9.1□□□□□ -0.95
MTHFD1-201ENST00000216605 SLC11A1P49279 550 aa9.1□□□□□ -0.95
MTHFD1-201ENST00000216605 CRADDP78560 199 aa9.1□□□□□ -0.95
MTHFD1-201ENST00000216605 KCNJ11Q14654 390 aa9.1□□□□□ -0.95
MTHFD1-201ENST00000216605 VSTM1Q6UX27 236 aa9.1□□□□□ -0.95
MTHFD1-201ENST00000216605 RELL1Q8IUW5 271 aa9.1□□□□□ -0.95
MTHFD1-201ENST00000216605 IGDCC3Q8IVU1 814 aa9.1□□□□□ -0.95
MTHFD1-201ENST00000216605 NUP93Q8N1F7 819 aa9.1□□□□□ -0.95
MTHFD1-201ENST00000216605 RIBC1Q8N443 379 aaPredicted RBP9.1□□□□□ -0.95
MTHFD1-201ENST00000216605 SPATA13Q96N96 652 aa9.1□□□□□ -0.95
MTHFD1-201ENST00000216605 WDR6Q9NNW5 1121 aaKnown RBP9.1□□□□□ -0.95
MTHFD1-201ENST00000216605 ANLNQ9NQW6 1124 aa9.1□□□□□ -0.95
MTHFD1-201ENST00000216605 PRDM5Q9NQX1 630 aaPredicted RBP9.1□□□□□ -0.95
MTHFD1-201ENST00000216605 UBP1Q9NZI7 540 aa9.1□□□□□ -0.95
MTHFD1-201ENST00000216605 CASP8AP2Q9UKL3 1982 aa9.1□□□□□ -0.95
MTHFD1-201ENST00000216605 PDCD11Q14690 1871 aaKnown RBP9.1□□□□□ -0.95
MTHFD1-201ENST00000216605 CLUHO75153 1309 aa9.1□□□□□ -0.95
MTHFD1-201ENST00000216605 HGSO14964 777 aaPredicted RBP9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 CSPG5O95196 566 aa9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 KRT4P19013 534 aa9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 MX2P20592 715 aa9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 GRIA1P42261 906 aa9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 DSC1Q08554 894 aa9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 NR1H3Q13133 447 aa9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 C10orf120Q5SQS8 335 aa9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 FUT10Q6P4F1 479 aa9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 TRAF7Q6Q0C0 670 aa9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 TTC9BQ8N6N2 239 aa9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 NT5C3BQ969T7 300 aa9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 C6orf203Q9P0P8 240 aaPredicted RBP9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 RABGEF1Q9UJ41 708 aa9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 TRIM33Q9UPN9 1127 aa9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 TTC3P53804 2025 aa9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 A0A1W2PPM1 405 aa9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 WDR91A4D1P6 747 aa9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 USP12O75317 370 aa9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 GCATO75600 419 aa9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 JCHAINP01591 159 aa9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 ENPP1P22413 925 aa9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 FDFT1P37268 417 aa9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 FAM189BP81408 668 aa9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 TLE2Q04725 743 aa9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 NEK10Q6ZWH5 1172 aa9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 TMCO5AQ8N6Q1 288 aa9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 ZNF784Q8NCA9 323 aaPredicted RBP9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 CASP10Q92851 521 aa9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 GLMNQ92990 594 aa9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 LRRC37BQ96QE4 947 aa9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 APOL2Q9BQE5 337 aa9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 CFHR5Q9BXR6 569 aa9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 FBXO44Q9H4M3 255 aa9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 GMIPQ9P107 970 aa9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 ZMAT5Q9UDW3 170 aaKnown RBP9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 CARD8Q9Y2G2 431 aa9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 TCRBV9S1A1TA0A576 114 aa9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 TMEM247A6NEH6 219 aa9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 ZNF487B1APH4 448 aa9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 PAGE1O75459 146 aa9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 RPL17P18621 184 aaKnown RBP9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 FUT4P22083 530 aa9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 YWHAQP27348 245 aa9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 CXCR3P49682 368 aa9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 AIF1P55008 147 aa9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 SH3BGRP55822 239 aaPredicted RBP9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 DUSP4Q13115 394 aa9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 INAQ16352 499 aa9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 PLEKHG4Q58EX7 1191 aa9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 SH2D4BQ5SQS7 431 aa9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 PM20D1Q6GTS8 502 aa9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 PRSS55Q6UWB4 352 aaPredicted RBP9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 NPAS4Q8IUM7 802 aa9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 GIMAP1Q8WWP7 306 aa9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 NTAN1Q96AB6 310 aa9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 FCRL2Q96LA5 508 aaPredicted RBP9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 TRIM56Q9BRZ2 755 aaKnown RBP9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 FRMD8Q9BZ67 464 aaPredicted RBP9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 NMUR1Q9HB89 426 aa9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 RHBDL2Q9NX52 303 aa9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 TXNDC16Q9P2K2 825 aa9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 CIDEBQ9UHD4 219 aa9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 SLC24A2Q9UI40 661 aa9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 SSX2IPQ9Y2D8 614 aa9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 SH3GLB1Q9Y371 365 aa9.09□□□□□ -0.95
MTHFD1-201ENST00000216605 IQANK1A0A1B0GTG1 560 aa9.08□□□□□ -0.96
MTHFD1-201ENST00000216605 FAM47DPA6NHR8 397 aa9.08□□□□□ -0.96
MTHFD1-201ENST00000216605 SYN3O14994 580 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms